Click here to switch to the map view.

The map label for this gene is 83310391

Identifier: 83310391

GI number: 83310391

Start: 1411999

End: 1412943

Strand: Reverse

Name: 83310391

Synonym: amb1292

Alternate gene names: NA

Gene position: 1412943-1411999 (Counterclockwise)

Preceding gene: 83310392

Following gene: 83310390

Centisome position: 28.45

GC content: 71.01

Gene sequence:

>945_bases
ATGTGGCTGAGCATCGCCCTGCTGGGCCTGCTGCCCGCGTCGGCCTGGGCCGCCCTGGTTCCGGGGGGCGGCGGCACGCC
CGCGCCGGGTGGCGACCTGCCGGAACCCCTGCGCAGTATCGCCAGCTGGGGCTTCGCCCTGCAGCGCCAGCTCACCGGCG
AGCTGCGCGAGCAACTGGCGGTGATGAAGAACACCGGCTCGTGGGAGCCCGCCGCCGCCATCATCCTCGCCGCCTTCCTT
TACGGCGTGTTCCACGCGGTCGGCCCCGGCCACGGCAAGGTGGTGATCGGCGGCTGGTTCGCCACCCGCCGCGCCCGCAT
CGTCCACGGCCTGACCGCCAGCCTGATCGCCGCCATGGTCCAGGCCGGTTCGGCCATCATCGCCGTGGGCGTGCTGGCCG
GATTGCTCAGCCTGGCGCCCCGCGCCATCACCGCCGGCACCGCCTGGCTGGAGCTGGGCTCCTTCGCCATGATCGCCGTC
ATCGGCGGGCTGATGACCTGGCGGACCCTGACCGGCAGAGGCTGCGGCCATGATCACGGCCCGCACGAACATCACCACCA
TCACGGGGCCTGCTGCGGCGGCCACCATCCTCATCACCCCGACGAGACGGCCGAACGCAATGCCCTGTTCACCATGGCGG
CGGCGGTGGGATTTCGCCCCTGTTCCGGCGCCATCCTGGTCCTGCTGTTCTGCTTCGCCAACGGCATGATCCTGATCGGC
GTGCTTGCCACCCTGGCCATGGGCCTGGGCGTGGCGGCGACGGTGGCAGCCATCGGCCTGGGGGCGCTGGGTCTCAACCG
GCTGGTCGAGCGGGGATTGGGCGGGTCGAGCCTGGGAGGGCGCATGCGTCTTGGCCTCGCCCTGGCCGGCTCGCTGTCCA
TCACCGTGCTGGGTGTGGTGCTGCTGATCGGCACCATTTTCAATGGGCCAACATCAATCGGCTAG

Upstream 100 bases:

>100_bases
CGGCCGGCTGCAAGGCGACCATCGCCCCGGATCTCGGCAATACCATCTTCGGCGGAGCGGTGACGCCCAAGCGGGCGACG
ATTTCATGCGAGTAGGACCC

Downstream 100 bases:

>100_bases
AATTTTCTAATTTAATCAAAGCAGTTACAAGTCATTCACATTGCACCCCATTAAATTAGGGCGCGGAGATGTGTCTTGTA
TTCCAAGGCATTGGCCTAGG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MWLSIALLGLLPASAWAALVPGGGGTPAPGGDLPEPLRSIASWGFALQRQLTGELREQLAVMKNTGSWEPAAAIILAAFL
YGVFHAVGPGHGKVVIGGWFATRRARIVHGLTASLIAAMVQAGSAIIAVGVLAGLLSLAPRAITAGTAWLELGSFAMIAV
IGGLMTWRTLTGRGCGHDHGPHEHHHHHGACCGGHHPHHPDETAERNALFTMAAAVGFRPCSGAILVLLFCFANGMILIG
VLATLAMGLGVAATVAAIGLGALGLNRLVERGLGGSSLGGRMRLGLALAGSLSITVLGVVLLIGTIFNGPTSIG

Sequences:

>Translated_314_residues
MWLSIALLGLLPASAWAALVPGGGGTPAPGGDLPEPLRSIASWGFALQRQLTGELREQLAVMKNTGSWEPAAAIILAAFL
YGVFHAVGPGHGKVVIGGWFATRRARIVHGLTASLIAAMVQAGSAIIAVGVLAGLLSLAPRAITAGTAWLELGSFAMIAV
IGGLMTWRTLTGRGCGHDHGPHEHHHHHGACCGGHHPHHPDETAERNALFTMAAAVGFRPCSGAILVLLFCFANGMILIG
VLATLAMGLGVAATVAAIGLGALGLNRLVERGLGGSSLGGRMRLGLALAGSLSITVLGVVLLIGTIFNGPTSIG
>Mature_314_residues
MWLSIALLGLLPASAWAALVPGGGGTPAPGGDLPEPLRSIASWGFALQRQLTGELREQLAVMKNTGSWEPAAAIILAAFL
YGVFHAVGPGHGKVVIGGWFATRRARIVHGLTASLIAAMVQAGSAIIAVGVLAGLLSLAPRAITAGTAWLELGSFAMIAV
IGGLMTWRTLTGRGCGHDHGPHEHHHHHGACCGGHHPHHPDETAERNALFTMAAAVGFRPCSGAILVLLFCFANGMILIG
VLATLAMGLGVAATVAAIGLGALGLNRLVERGLGGSSLGGRMRLGLALAGSLSITVLGVVLLIGTIFNGPTSIG

Specific function: Efflux system for nickel and cobalt (Potential) [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 31873; Mature: 31873

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLSIALLGLLPASAWAALVPGGGGTPAPGGDLPEPLRSIASWGFALQRQLTGELREQLA
CHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMKNTGSWEPAAAIILAAFLYGVFHAVGPGHGKVVIGGWFATRRARIVHGLTASLIAAMV
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
QAGSAIIAVGVLAGLLSLAPRAITAGTAWLELGSFAMIAVIGGLMTWRTLTGRGCGHDHG
HCCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PHEHHHHHGACCGGHHPHHPDETAERNALFTMAAAVGFRPCSGAILVLLFCFANGMILIG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHH
VLATLAMGLGVAATVAAIGLGALGLNRLVERGLGGSSLGGRMRLGLALAGSLSITVLGVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHH
LLIGTIFNGPTSIG
HHHHHHHCCCCCCC
>Mature Secondary Structure
MWLSIALLGLLPASAWAALVPGGGGTPAPGGDLPEPLRSIASWGFALQRQLTGELREQLA
CHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMKNTGSWEPAAAIILAAFLYGVFHAVGPGHGKVVIGGWFATRRARIVHGLTASLIAAMV
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
QAGSAIIAVGVLAGLLSLAPRAITAGTAWLELGSFAMIAVIGGLMTWRTLTGRGCGHDHG
HCCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PHEHHHHHGACCGGHHPHHPDETAERNALFTMAAAVGFRPCSGAILVLLFCFANGMILIG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHH
VLATLAMGLGVAATVAAIGLGALGLNRLVERGLGGSSLGGRMRLGLALAGSLSITVLGVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHH
LLIGTIFNGPTSIG
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]