| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83310345
Identifier: 83310345
GI number: 83310345
Start: 1328360
End: 1328782
Strand: Reverse
Name: 83310345
Synonym: amb1246
Alternate gene names: NA
Gene position: 1328782-1328360 (Counterclockwise)
Preceding gene: 83310346
Following gene: 83310337
Centisome position: 26.75
GC content: 66.67
Gene sequence:
>423_bases ATGAAGACCGTCGCCGTTTTCCTGTTCGCCCTGTTCGCCACCCTGCCGGCCTTGGCCGCCGAGCGCGAGGTGACCATGTG GAAGTCCCCCACCTGCGGCTGTTGCGAAGGCTGGGCCGAGCATATGCGCCAATCCGGCTACAAGGTGAAGTCCGTGGACG TGGACGACATCGACCAGATCAAGCGGGCCTACGGCATTCCCGCCCCCCTGCAGTCCTGCCACACCGCCAAGGTGGACGGC TATCTGCTGGAGGGTCATGTCCCCGCCGAGGCGGTGGACCGCCTGCTGACGGAAAAGCCCCGGACGCGAGGCATCGCCTC GCCCGGCATGCCCATGGGCTCGCCCGGAATGGGGGGACCGAAGGAGGACAACGTGGTCCACAGCTTCGGCCCCGAAGGAA CCAAGGTGTTCGGGCGGTACTGA
Upstream 100 bases:
>100_bases TATATCCGCGCCGTGCAGGCGGCCAACGGCCTGGGGGGAGCGCCGGCGACGGCGGCGGCCGATCCCCATGCCGGACACGG ACATTGAGGGAGAACCAGCC
Downstream 100 bases:
>100_bases CTACTCCGCCTGCTTGCGCAGGTCCCGGACCCGCACCGCCTTACCCTGCGAGCGCGGCAGCTCGCCGGGCAGGCGGACGA TCACCTCGCAGGAAATGCCG
Product: metal-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKTVAVFLFALFATLPALAAEREVTMWKSPTCGCCEGWAEHMRQSGYKVKSVDVDDIDQIKRAYGIPAPLQSCHTAKVDG YLLEGHVPAEAVDRLLTEKPRTRGIASPGMPMGSPGMGGPKEDNVVHSFGPEGTKVFGRY
Sequences:
>Translated_140_residues MKTVAVFLFALFATLPALAAEREVTMWKSPTCGCCEGWAEHMRQSGYKVKSVDVDDIDQIKRAYGIPAPLQSCHTAKVDG YLLEGHVPAEAVDRLLTEKPRTRGIASPGMPMGSPGMGGPKEDNVVHSFGPEGTKVFGRY >Mature_140_residues MKTVAVFLFALFATLPALAAEREVTMWKSPTCGCCEGWAEHMRQSGYKVKSVDVDDIDQIKRAYGIPAPLQSCHTAKVDG YLLEGHVPAEAVDRLLTEKPRTRGIASPGMPMGSPGMGGPKEDNVVHSFGPEGTKVFGRY
Specific function: Unknown
COG id: COG3019
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15168; Mature: 15168
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVAVFLFALFATLPALAAEREVTMWKSPTCGCCEGWAEHMRQSGYKVKSVDVDDIDQI CHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHH KRAYGIPAPLQSCHTAKVDGYLLEGHVPAEAVDRLLTEKPRTRGIASPGMPMGSPGMGGP HHHHCCCCCHHHCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC KEDNVVHSFGPEGTKVFGRY CCCCEEECCCCCCCEECCCC >Mature Secondary Structure MKTVAVFLFALFATLPALAAEREVTMWKSPTCGCCEGWAEHMRQSGYKVKSVDVDDIDQI CHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHH KRAYGIPAPLQSCHTAKVDGYLLEGHVPAEAVDRLLTEKPRTRGIASPGMPMGSPGMGGP HHHHCCCCCHHHCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC KEDNVVHSFGPEGTKVFGRY CCCCEEECCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA