Click here to switch to the map view.

The map label for this gene is yhjA [H]

Identifier: 83310321

GI number: 83310321

Start: 1296669

End: 1298021

Strand: Reverse

Name: yhjA [H]

Synonym: amb1222

Alternate gene names: 83310321

Gene position: 1298021-1296669 (Counterclockwise)

Preceding gene: 83310324

Following gene: 83310320

Centisome position: 26.13

GC content: 70.44

Gene sequence:

>1353_bases
ATGAACGCCGATCTATCCCAGGTGCTGGGCACCGGGGCCATGGTGGTCCTTTTCGCCACCTCGGCCCTGTTTTTGCTGGT
TCGCATGGATCTGGCCCCGGCCGGAGGCCGCCCCGGCCCCCTGGACGGCGGCGGGCGCTGGTTCCTGGGCGCGGCGCTGG
GCGTCGGAATCATCGCCTTTTCCCTCAAGCTGGCCATCATCCTGACCCTGTCATCGTTCCCCGAGCAGACCATCGCGCCG
CTACTGCCCGATCCGGCCCTGGCGGTCCGGGAGGATGGCCGCACCGAATGGCCGCTCCTCGCCGGACCCGATGGCGGAGA
CCGCCCCTATCCCTGGCGCGCCCTGCCGGCGGTGGTGCCGTCGCCGCCCGACAATCCCACCACCCCCGCCAAGGTCGCCC
TGGGCGAGCGGCTGTTCCACGACAAGGACCTGTCGCTCGATCACACGGTCTCCTGCGCCAGTTGCCATGACCTGCTGGGC
GGGGCGGGCGGCGACCGGCGCGCCACCTCCCTGGGCATCCGGGGGATCGTCGGAGGCCGCAACGCCCCCACGGTCTGGAA
TGCGGCGTTCCAGTCGCGCCTGTTCTGGGACGGCCGGGCCGGATCGCTGGAAGAGCAGGCCATGGGGCCGCCGCTCAATC
CCGACGAGATGGGCATGCCGTCCGCCGCCGCCATCGAGGCCCGCATCGGCGCCAGCCCCTCCTACCGCGAAGCCTTCGCC
GAAGCGTTCGGCGACGACGCGCCCGTCACCATGCGGCGCATCACCCAGGCCATCGCCGCCTTCGAGCGGACCCTGGTCAC
CAATGACAGTCCCTATGACCGCTTCGTCCGGGGCGATGACAAGGCGCTCGATCCCGCCCAGAAGCGGGGGATGTGGCTGT
TCCAGTCGGTGGGCTGCGTCATGTGCCATTCGGGGCCCAATTTCAGCGGCGCCTCCCTGGTGGGGCCGCAGAACCCCTAT
GCCCCGCTGATGGCCAGCCGATCCGCCCCTGCCCGCCGCCACGGCCTGACGGTGGACAAGGGCAAGGCGCCGGCCGGATC
GGTGGACGGCCTCTGGCGCATTCCCTCGCTGCGCAACGTGGCGCTGACCGCGCCCTATTTCCACAACGGCTCGGTCAGCG
AGTTGGAAGAGGCGGTGCGCGTCATGGCCACCGCGCAACTGAACGCCACCCTCAGCGAGGACCGCCGGCTGGGCAAGACG
CCGTCCTGGTCCGTGGAAGGCGGCCGGTTCGAGGTGGTCGAGCGCCTGGTCCTTTCCGAGGCCGACATCCGCGATATCGC
CGCGTTTCTCCGGGGGCTGACCAGTGATAGGCTGGCACGGCTCAGCCTTGATCGGGAAAGGGGGCCCGAATGA

Upstream 100 bases:

>100_bases
GCTACAAACGCCCCCGTTTTCCGTCTGTACCCTCGGATACAGATCCCCCTCCTGGGCGGCGCTACCATGGCTGCCGCAAC
GTCACGGGGGAGCCACGACC

Downstream 100 bases:

>100_bases
AGGAGATCACCCGTATCGCCACCTTCCGCGACCTGTCGGCCCAGGGACGCCAGAGGCTGGAAAGCGGCGCGCTGACCTAT
CGCTTCCCGCCCGGCAAGAC

Product: cytochrome c peroxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MNADLSQVLGTGAMVVLFATSALFLLVRMDLAPAGGRPGPLDGGGRWFLGAALGVGIIAFSLKLAIILTLSSFPEQTIAP
LLPDPALAVREDGRTEWPLLAGPDGGDRPYPWRALPAVVPSPPDNPTTPAKVALGERLFHDKDLSLDHTVSCASCHDLLG
GAGGDRRATSLGIRGIVGGRNAPTVWNAAFQSRLFWDGRAGSLEEQAMGPPLNPDEMGMPSAAAIEARIGASPSYREAFA
EAFGDDAPVTMRRITQAIAAFERTLVTNDSPYDRFVRGDDKALDPAQKRGMWLFQSVGCVMCHSGPNFSGASLVGPQNPY
APLMASRSAPARRHGLTVDKGKAPAGSVDGLWRIPSLRNVALTAPYFHNGSVSELEEAVRVMATAQLNATLSEDRRLGKT
PSWSVEGGRFEVVERLVLSEADIRDIAAFLRGLTSDRLARLSLDRERGPE

Sequences:

>Translated_450_residues
MNADLSQVLGTGAMVVLFATSALFLLVRMDLAPAGGRPGPLDGGGRWFLGAALGVGIIAFSLKLAIILTLSSFPEQTIAP
LLPDPALAVREDGRTEWPLLAGPDGGDRPYPWRALPAVVPSPPDNPTTPAKVALGERLFHDKDLSLDHTVSCASCHDLLG
GAGGDRRATSLGIRGIVGGRNAPTVWNAAFQSRLFWDGRAGSLEEQAMGPPLNPDEMGMPSAAAIEARIGASPSYREAFA
EAFGDDAPVTMRRITQAIAAFERTLVTNDSPYDRFVRGDDKALDPAQKRGMWLFQSVGCVMCHSGPNFSGASLVGPQNPY
APLMASRSAPARRHGLTVDKGKAPAGSVDGLWRIPSLRNVALTAPYFHNGSVSELEEAVRVMATAQLNATLSEDRRLGKT
PSWSVEGGRFEVVERLVLSEADIRDIAAFLRGLTSDRLARLSLDRERGPE
>Mature_450_residues
MNADLSQVLGTGAMVVLFATSALFLLVRMDLAPAGGRPGPLDGGGRWFLGAALGVGIIAFSLKLAIILTLSSFPEQTIAP
LLPDPALAVREDGRTEWPLLAGPDGGDRPYPWRALPAVVPSPPDNPTTPAKVALGERLFHDKDLSLDHTVSCASCHDLLG
GAGGDRRATSLGIRGIVGGRNAPTVWNAAFQSRLFWDGRAGSLEEQAMGPPLNPDEMGMPSAAAIEARIGASPSYREAFA
EAFGDDAPVTMRRITQAIAAFERTLVTNDSPYDRFVRGDDKALDPAQKRGMWLFQSVGCVMCHSGPNFSGASLVGPQNPY
APLMASRSAPARRHGLTVDKGKAPAGSVDGLWRIPSLRNVALTAPYFHNGSVSELEEAVRVMATAQLNATLSEDRRLGKT
PSWSVEGGRFEVVERLVLSEADIRDIAAFLRGLTSDRLARLSLDRERGPE

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789935, Length=279, Percent_Identity=41.9354838709677, Blast_Score=200, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR004852 [H]

Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]

EC number: =1.11.1.5 [H]

Molecular weight: Translated: 47921; Mature: 47921

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNADLSQVLGTGAMVVLFATSALFLLVRMDLAPAGGRPGPLDGGGRWFLGAALGVGIIAF
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SLKLAIILTLSSFPEQTIAPLLPDPALAVREDGRTEWPLLAGPDGGDRPYPWRALPAVVP
HHHHHHHHHHHHCCCHHHHCCCCCCCHHEECCCCCCCCEEECCCCCCCCCCCCCCCCCCC
SPPDNPTTPAKVALGERLFHDKDLSLDHTVSCASCHDLLGGAGGDRRATSLGIRGIVGGR
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCEEEECCC
NAPTVWNAAFQSRLFWDGRAGSLEEQAMGPPLNPDEMGMPSAAAIEARIGASPSYREAFA
CCCHHHHHHHHHHEEECCCCCCCHHHHCCCCCCHHHCCCCCHHHHHHHCCCCCHHHHHHH
EAFGDDAPVTMRRITQAIAAFERTLVTNDSPYDRFVRGDDKALDPAQKRGMWLFQSVGCV
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHCCEEHHHHCCEE
MCHSGPNFSGASLVGPQNPYAPLMASRSAPARRHGLTVDKGKAPAGSVDGLWRIPSLRNV
EECCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCCE
ALTAPYFHNGSVSELEEAVRVMATAQLNATLSEDRRLGKTPSWSVEGGRFEVVERLVLSE
EEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC
ADIRDIAAFLRGLTSDRLARLSLDRERGPE
CCHHHHHHHHHCCCHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MNADLSQVLGTGAMVVLFATSALFLLVRMDLAPAGGRPGPLDGGGRWFLGAALGVGIIAF
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SLKLAIILTLSSFPEQTIAPLLPDPALAVREDGRTEWPLLAGPDGGDRPYPWRALPAVVP
HHHHHHHHHHHHCCCHHHHCCCCCCCHHEECCCCCCCCEEECCCCCCCCCCCCCCCCCCC
SPPDNPTTPAKVALGERLFHDKDLSLDHTVSCASCHDLLGGAGGDRRATSLGIRGIVGGR
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCEEEECCC
NAPTVWNAAFQSRLFWDGRAGSLEEQAMGPPLNPDEMGMPSAAAIEARIGASPSYREAFA
CCCHHHHHHHHHHEEECCCCCCCHHHHCCCCCCHHHCCCCCHHHHHHHCCCCCHHHHHHH
EAFGDDAPVTMRRITQAIAAFERTLVTNDSPYDRFVRGDDKALDPAQKRGMWLFQSVGCV
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHCCEEHHHHCCEE
MCHSGPNFSGASLVGPQNPYAPLMASRSAPARRHGLTVDKGKAPAGSVDGLWRIPSLRNV
EECCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCCE
ALTAPYFHNGSVSELEEAVRVMATAQLNATLSEDRRLGKTPSWSVEGGRFEVVERLVLSE
EEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC
ADIRDIAAFLRGLTSDRLARLSLDRERGPE
CCHHHHHHHHHCCCHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]