| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310187
Identifier: 83310187
GI number: 83310187
Start: 1156760
End: 1157668
Strand: Reverse
Name: 83310187
Synonym: amb1088
Alternate gene names: NA
Gene position: 1157668-1156760 (Counterclockwise)
Preceding gene: 83310193
Following gene: 83310170
Centisome position: 23.31
GC content: 67.11
Gene sequence:
>909_bases GTGCCCCCCCAGTCGAGCGCGCCCCGTGGAATTCGGCCATTTAGCCCCATGGCGGGGTGGCCGCAGGCCTTCTGCATCGT CGCGACGGCCCTGCTCTCCGGCTGTGGCGGAGGTGGTTTTTGCGGCGCTCCCGTCAACGCCAAGGCTCCTGTCTGTTCGA TGACGGAGGCGCAGATGGCGGCCATGCCCGTTCAGGGCGAGTGGTGGCACCCCAGGCAAGTCGTCACACTGCATGCCCTT GACACGGCTCGGCAGACGGATGCCCTGAGAAGGGCGGTCGGCGGCCACACCGGCATGGAACTGGCGGGAGTCGCCGTCCC AGACCCGGACTCAGGACGCTGCGATATCTACGTGGCTCTGCCGGCGGGTCCCTCGGCATTTCAACTGGAGGCGGTCGGCC ATGAAGTCCTGCACTGCCTGGCCGGCGGCTTTCACCCCGACATGCTGACCGGGAAAAAGACATCAAGCTATCTTTCCGCT CGCCAGGCGGCGGCCCAGCGCGAAGGCCTTTCCTCGGCCATCGACGCCGCGGAAAAGCAATCACGCTGGACCTTGTCCTG CACCCTTGGAACCGGTTCGTGTCCGCCGCCGGTCCGCAAGTCGGGAACCAGCGTCGAGATCACGGTGCACCCCGTCTCGC CCGACACCCAGGACCGTCTCGAACGGGCTCTCGGGCAAACCTCGCAACGGCCGGAGGGGATAACCCTGACCGATTCCTCC GGTCGGCGTTGCGACCTTTACCTGACGCTTCCCCCCACCTATCTGGGGCGTGGCATGGAGAATTTGGGACGCCGGATGCT TGCCTGTTTTACCCCGCCGGGCAATGCCGGCGCCTCGGAACAGCGTCGGCGGATTGTTGACGAGGTGCTGGCCGGCTCGC CGGCCGAACGCCCCCCCACGGTGCCCTGA
Upstream 100 bases:
>100_bases CCGGATGGCAGCGGATTTCGGAGAATCAGCGCGTCCAGAAACCGCTCCGTAGGACCATTCCCCAGAGGATCGGGCGACTG TAAGCGTTAAAGGAGATGGA
Downstream 100 bases:
>100_bases TCACCGGGACTCGATGAGTTGGCGCACCACCGGATCCAGGGGCATGAAGCGCTCGATCCCCGCGGCGACAGAAGCCCTGA ATGAGTCGACCGCCAGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MPPQSSAPRGIRPFSPMAGWPQAFCIVATALLSGCGGGGFCGAPVNAKAPVCSMTEAQMAAMPVQGEWWHPRQVVTLHAL DTARQTDALRRAVGGHTGMELAGVAVPDPDSGRCDIYVALPAGPSAFQLEAVGHEVLHCLAGGFHPDMLTGKKTSSYLSA RQAAAQREGLSSAIDAAEKQSRWTLSCTLGTGSCPPPVRKSGTSVEITVHPVSPDTQDRLERALGQTSQRPEGITLTDSS GRRCDLYLTLPPTYLGRGMENLGRRMLACFTPPGNAGASEQRRRIVDEVLAGSPAERPPTVP
Sequences:
>Translated_302_residues MPPQSSAPRGIRPFSPMAGWPQAFCIVATALLSGCGGGGFCGAPVNAKAPVCSMTEAQMAAMPVQGEWWHPRQVVTLHAL DTARQTDALRRAVGGHTGMELAGVAVPDPDSGRCDIYVALPAGPSAFQLEAVGHEVLHCLAGGFHPDMLTGKKTSSYLSA RQAAAQREGLSSAIDAAEKQSRWTLSCTLGTGSCPPPVRKSGTSVEITVHPVSPDTQDRLERALGQTSQRPEGITLTDSS GRRCDLYLTLPPTYLGRGMENLGRRMLACFTPPGNAGASEQRRRIVDEVLAGSPAERPPTVP >Mature_301_residues PPQSSAPRGIRPFSPMAGWPQAFCIVATALLSGCGGGGFCGAPVNAKAPVCSMTEAQMAAMPVQGEWWHPRQVVTLHALD TARQTDALRRAVGGHTGMELAGVAVPDPDSGRCDIYVALPAGPSAFQLEAVGHEVLHCLAGGFHPDMLTGKKTSSYLSAR QAAAQREGLSSAIDAAEKQSRWTLSCTLGTGSCPPPVRKSGTSVEITVHPVSPDTQDRLERALGQTSQRPEGITLTDSSG RRCDLYLTLPPTYLGRGMENLGRRMLACFTPPGNAGASEQRRRIVDEVLAGSPAERPPTVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31789; Mature: 31658
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: PS00142 ZINC_PROTEASE ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPQSSAPRGIRPFSPMAGWPQAFCIVATALLSGCGGGGFCGAPVNAKAPVCSMTEAQMA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH AMPVQGEWWHPRQVVTLHALDTARQTDALRRAVGGHTGMELAGVAVPDPDSGRCDIYVAL HCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEE PAGPSAFQLEAVGHEVLHCLAGGFHPDMLTGKKTSSYLSARQAAAQREGLSSAIDAAEKQ CCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC SRWTLSCTLGTGSCPPPVRKSGTSVEITVHPVSPDTQDRLERALGQTSQRPEGITLTDSS CCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEECCC GRRCDLYLTLPPTYLGRGMENLGRRMLACFTPPGNAGASEQRRRIVDEVLAGSPAERPPT CCEEEEEEECCHHHHHCCHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC VP CC >Mature Secondary Structure PPQSSAPRGIRPFSPMAGWPQAFCIVATALLSGCGGGGFCGAPVNAKAPVCSMTEAQMA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH AMPVQGEWWHPRQVVTLHALDTARQTDALRRAVGGHTGMELAGVAVPDPDSGRCDIYVAL HCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEE PAGPSAFQLEAVGHEVLHCLAGGFHPDMLTGKKTSSYLSARQAAAQREGLSSAIDAAEKQ CCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC SRWTLSCTLGTGSCPPPVRKSGTSVEITVHPVSPDTQDRLERALGQTSQRPEGITLTDSS CCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEECCC GRRCDLYLTLPPTYLGRGMENLGRRMLACFTPPGNAGASEQRRRIVDEVLAGSPAERPPT CCEEEEEEECCHHHHHCCHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC VP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA