Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83310163

Identifier: 83310163

GI number: 83310163

Start: 1126525

End: 1128090

Strand: Reverse

Name: 83310163

Synonym: amb1064

Alternate gene names: NA

Gene position: 1128090-1126525 (Counterclockwise)

Preceding gene: 83310164

Following gene: 83310162

Centisome position: 22.71

GC content: 64.3

Gene sequence:

>1566_bases
ATGCCACTCCGCAAGATCGCCACTTGGCTGCCGCGTCTTCTGGCCCTGTGCGCCATCGCCCTCATGGCCCTACCCGGCGC
CCAATACCTCTTCCAGCCGTTCCGGCCACCGTCAATCAGGGAGCATTTGCCCGCGCCTCCCGCCATGCCGGGCCTGTCCA
TCTCCTCCTTCCTGGATGGTTCGCTGCAAAGCTGGGTCACGGCGGTCCTGGCACGCGACAGCTCGGCGCGGCCATTTGCG
CTGACCGCCCGCAACGAGGCGTTTCTCCGCCTGTTCCCGACACGGCCCAATAGATTTTACACCTACGCCGAGCCGATGGG
ATTCTACCCCGTCGATACCATCCGCCGTCTGAACTATGATCTCCGCAACGGCGCTGCCGTCGCCACGGTTTACCGCGAGG
CGGCAGAGCGCGTGAAATTGCTGCAGAGGCTGCTCGCGGCCAAGGGCGTCGTATTGATGGTCGTCGCCCCACCGCCCAAA
GTGCGCCTGTATCCGGAATACCTGGAGAGCGGATGGCTGGATGCCCCCGCCACGGAAATCTGGTCGCGAAGCCCCCCCCA
ATACAGCAATGCCCTCGCCGCCCAAGGCGTGCTGGGATTGAATGTATTTGAAATGCTGTGGCGCGATCGGGGGGGCTATC
CCTGGCCGTTCTTCGCCACCACCGGCTTCCACTGGTCGTTCTGGACCGGCTGCATGGTTACGGCCCGCCTCTTCGAGACC
CTGGACGGCATGAGCGGCCGCCCCTGGCCAGGCGTCGATTGCAGCGAAACCAAGGTTGACCAGGCCTCGGGGCCTGATAC
CGACATCGCGGTCGTGCTGAACATCGTGGCGCCCACAAGACTCCTGAGGCCCACTCCGTTCGTGACCGCTAAGCGCCGTT
CCACCGCGGGAGGCGAGGGCCGGAAACTGCTGGTCATAGGCGACAGCTACTCCGACCAGATCGTCTATCACGCCCTACGC
CTGCTCGGCCCGGCCAACGTGGTTTTCTGGGACTATTTCGCCAAACAACGGACTTTCAACGACAAGATGGAAGCAACCAT
CACCGACCTGTCTAAGGATGGCGTCGTGCGCCGCCTCGTGGAGAATGACTTCGATGCGGTCCTGGTGGTGACCTCGGACG
GCAATGTGTCACGCGACAATCCCAGCAGGGGTGAATTCGGCTTCACATCAGCAGCCCTGACCGAATTGCTCTCCCGGCCT
GGGACCGGGGGGCAACTACCGGACGCCGCCTTTGTCGAGGGCTGGCGCCCCCATGAGACATTCCGCGAAATCGCCGCCCC
GCAGGCCGCACTGGCCTTCGTCGGCCCGGGCGGCATGGTCGATCGCATGACCCTGAGTATGACCTGGCAGGCGGCTCCGG
CCGATTCCGCCGCCCTTGACCTGGACGTGACGGTCAAAGGAGTGCCGGTGGGAACCCTGACGGTCCCGCCTTCGGGTGGC
GAGGTTTCCGTCTCCGTCCCCCGTGGTGCGGCCGGAAGCACCGAATTCATCTCCGTAACCCTCTCCCCCAAAGGGAATAC
GGCCGGTTATCGCCTGACCGGTGCCCGGGTTTCATTCTTCCGTTGA

Upstream 100 bases:

>100_bases
CGCCTTACCACCGGCGGCCTGCTGCTGACGGCCGGACTGGCCGGCGCATTCAGCGGCAACTACTCCCCCTTCCTCTACTT
CAGGTTCTGAGGTCAGCGCG

Downstream 100 bases:

>100_bases
TGGTGGGGCGGGTCCGTCCGGTCCACCTTGCAGCCATCCGCCCTTTGGATTACTGTCCCCCGGCTTCGCGCACGGATCAT
ACGGCACGGAGTGAGAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MPLRKIATWLPRLLALCAIALMALPGAQYLFQPFRPPSIREHLPAPPAMPGLSISSFLDGSLQSWVTAVLARDSSARPFA
LTARNEAFLRLFPTRPNRFYTYAEPMGFYPVDTIRRLNYDLRNGAAVATVYREAAERVKLLQRLLAAKGVVLMVVAPPPK
VRLYPEYLESGWLDAPATEIWSRSPPQYSNALAAQGVLGLNVFEMLWRDRGGYPWPFFATTGFHWSFWTGCMVTARLFET
LDGMSGRPWPGVDCSETKVDQASGPDTDIAVVLNIVAPTRLLRPTPFVTAKRRSTAGGEGRKLLVIGDSYSDQIVYHALR
LLGPANVVFWDYFAKQRTFNDKMEATITDLSKDGVVRRLVENDFDAVLVVTSDGNVSRDNPSRGEFGFTSAALTELLSRP
GTGGQLPDAAFVEGWRPHETFREIAAPQAALAFVGPGGMVDRMTLSMTWQAAPADSAALDLDVTVKGVPVGTLTVPPSGG
EVSVSVPRGAAGSTEFISVTLSPKGNTAGYRLTGARVSFFR

Sequences:

>Translated_521_residues
MPLRKIATWLPRLLALCAIALMALPGAQYLFQPFRPPSIREHLPAPPAMPGLSISSFLDGSLQSWVTAVLARDSSARPFA
LTARNEAFLRLFPTRPNRFYTYAEPMGFYPVDTIRRLNYDLRNGAAVATVYREAAERVKLLQRLLAAKGVVLMVVAPPPK
VRLYPEYLESGWLDAPATEIWSRSPPQYSNALAAQGVLGLNVFEMLWRDRGGYPWPFFATTGFHWSFWTGCMVTARLFET
LDGMSGRPWPGVDCSETKVDQASGPDTDIAVVLNIVAPTRLLRPTPFVTAKRRSTAGGEGRKLLVIGDSYSDQIVYHALR
LLGPANVVFWDYFAKQRTFNDKMEATITDLSKDGVVRRLVENDFDAVLVVTSDGNVSRDNPSRGEFGFTSAALTELLSRP
GTGGQLPDAAFVEGWRPHETFREIAAPQAALAFVGPGGMVDRMTLSMTWQAAPADSAALDLDVTVKGVPVGTLTVPPSGG
EVSVSVPRGAAGSTEFISVTLSPKGNTAGYRLTGARVSFFR
>Mature_520_residues
PLRKIATWLPRLLALCAIALMALPGAQYLFQPFRPPSIREHLPAPPAMPGLSISSFLDGSLQSWVTAVLARDSSARPFAL
TARNEAFLRLFPTRPNRFYTYAEPMGFYPVDTIRRLNYDLRNGAAVATVYREAAERVKLLQRLLAAKGVVLMVVAPPPKV
RLYPEYLESGWLDAPATEIWSRSPPQYSNALAAQGVLGLNVFEMLWRDRGGYPWPFFATTGFHWSFWTGCMVTARLFETL
DGMSGRPWPGVDCSETKVDQASGPDTDIAVVLNIVAPTRLLRPTPFVTAKRRSTAGGEGRKLLVIGDSYSDQIVYHALRL
LGPANVVFWDYFAKQRTFNDKMEATITDLSKDGVVRRLVENDFDAVLVVTSDGNVSRDNPSRGEFGFTSAALTELLSRPG
TGGQLPDAAFVEGWRPHETFREIAAPQAALAFVGPGGMVDRMTLSMTWQAAPADSAALDLDVTVKGVPVGTLTVPPSGGE
VSVSVPRGAAGSTEFISVTLSPKGNTAGYRLTGARVSFFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56849; Mature: 56718

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRKIATWLPRLLALCAIALMALPGAQYLFQPFRPPSIREHLPAPPAMPGLSISSFLDG
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHCH
SLQSWVTAVLARDSSARPFALTARNEAFLRLFPTRPNRFYTYAEPMGFYPVDTIRRLNYD
HHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCEEEECCCCCCCCHHHHHHCCCC
LRNGAAVATVYREAAERVKLLQRLLAAKGVVLMVVAPPPKVRLYPEYLESGWLDAPATEI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHHCCCCCCCHHHH
WSRSPPQYSNALAAQGVLGLNVFEMLWRDRGGYPWPFFATTGFHWSFWTGCMVTARLFET
HCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH
LDGMSGRPWPGVDCSETKVDQASGPDTDIAVVLNIVAPTRLLRPTPFVTAKRRSTAGGEG
HCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCHHHCCCCCCEEECCCCCCCCCC
RKLLVIGDSYSDQIVYHALRLLGPANVVFWDYFAKQRTFNDKMEATITDLSKDGVVRRLV
CEEEEECCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH
ENDFDAVLVVTSDGNVSRDNPSRGEFGFTSAALTELLSRPGTGGQLPDAAFVEGWRPHET
HCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHH
FREIAAPQAALAFVGPGGMVDRMTLSMTWQAAPADSAALDLDVTVKGVPVGTLTVPPSGG
HHHHCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECEEEEEEEECCCCC
EVSVSVPRGAAGSTEFISVTLSPKGNTAGYRLTGARVSFFR
EEEEECCCCCCCCCEEEEEEECCCCCCCCEEEECCEEEECC
>Mature Secondary Structure 
PLRKIATWLPRLLALCAIALMALPGAQYLFQPFRPPSIREHLPAPPAMPGLSISSFLDG
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHCH
SLQSWVTAVLARDSSARPFALTARNEAFLRLFPTRPNRFYTYAEPMGFYPVDTIRRLNYD
HHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCEEEECCCCCCCCHHHHHHCCCC
LRNGAAVATVYREAAERVKLLQRLLAAKGVVLMVVAPPPKVRLYPEYLESGWLDAPATEI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHHCCCCCCCHHHH
WSRSPPQYSNALAAQGVLGLNVFEMLWRDRGGYPWPFFATTGFHWSFWTGCMVTARLFET
HCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH
LDGMSGRPWPGVDCSETKVDQASGPDTDIAVVLNIVAPTRLLRPTPFVTAKRRSTAGGEG
HCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCHHHCCCCCCEEECCCCCCCCCC
RKLLVIGDSYSDQIVYHALRLLGPANVVFWDYFAKQRTFNDKMEATITDLSKDGVVRRLV
CEEEEECCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH
ENDFDAVLVVTSDGNVSRDNPSRGEFGFTSAALTELLSRPGTGGQLPDAAFVEGWRPHET
HCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHH
FREIAAPQAALAFVGPGGMVDRMTLSMTWQAAPADSAALDLDVTVKGVPVGTLTVPPSGG
HHHHCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECEEEEEEEECCCCC
EVSVSVPRGAAGSTEFISVTLSPKGNTAGYRLTGARVSFFR
EEEEECCCCCCCCCEEEEEEECCCCCCCCEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA