| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310163
Identifier: 83310163
GI number: 83310163
Start: 1126525
End: 1128090
Strand: Reverse
Name: 83310163
Synonym: amb1064
Alternate gene names: NA
Gene position: 1128090-1126525 (Counterclockwise)
Preceding gene: 83310164
Following gene: 83310162
Centisome position: 22.71
GC content: 64.3
Gene sequence:
>1566_bases ATGCCACTCCGCAAGATCGCCACTTGGCTGCCGCGTCTTCTGGCCCTGTGCGCCATCGCCCTCATGGCCCTACCCGGCGC CCAATACCTCTTCCAGCCGTTCCGGCCACCGTCAATCAGGGAGCATTTGCCCGCGCCTCCCGCCATGCCGGGCCTGTCCA TCTCCTCCTTCCTGGATGGTTCGCTGCAAAGCTGGGTCACGGCGGTCCTGGCACGCGACAGCTCGGCGCGGCCATTTGCG CTGACCGCCCGCAACGAGGCGTTTCTCCGCCTGTTCCCGACACGGCCCAATAGATTTTACACCTACGCCGAGCCGATGGG ATTCTACCCCGTCGATACCATCCGCCGTCTGAACTATGATCTCCGCAACGGCGCTGCCGTCGCCACGGTTTACCGCGAGG CGGCAGAGCGCGTGAAATTGCTGCAGAGGCTGCTCGCGGCCAAGGGCGTCGTATTGATGGTCGTCGCCCCACCGCCCAAA GTGCGCCTGTATCCGGAATACCTGGAGAGCGGATGGCTGGATGCCCCCGCCACGGAAATCTGGTCGCGAAGCCCCCCCCA ATACAGCAATGCCCTCGCCGCCCAAGGCGTGCTGGGATTGAATGTATTTGAAATGCTGTGGCGCGATCGGGGGGGCTATC CCTGGCCGTTCTTCGCCACCACCGGCTTCCACTGGTCGTTCTGGACCGGCTGCATGGTTACGGCCCGCCTCTTCGAGACC CTGGACGGCATGAGCGGCCGCCCCTGGCCAGGCGTCGATTGCAGCGAAACCAAGGTTGACCAGGCCTCGGGGCCTGATAC CGACATCGCGGTCGTGCTGAACATCGTGGCGCCCACAAGACTCCTGAGGCCCACTCCGTTCGTGACCGCTAAGCGCCGTT CCACCGCGGGAGGCGAGGGCCGGAAACTGCTGGTCATAGGCGACAGCTACTCCGACCAGATCGTCTATCACGCCCTACGC CTGCTCGGCCCGGCCAACGTGGTTTTCTGGGACTATTTCGCCAAACAACGGACTTTCAACGACAAGATGGAAGCAACCAT CACCGACCTGTCTAAGGATGGCGTCGTGCGCCGCCTCGTGGAGAATGACTTCGATGCGGTCCTGGTGGTGACCTCGGACG GCAATGTGTCACGCGACAATCCCAGCAGGGGTGAATTCGGCTTCACATCAGCAGCCCTGACCGAATTGCTCTCCCGGCCT GGGACCGGGGGGCAACTACCGGACGCCGCCTTTGTCGAGGGCTGGCGCCCCCATGAGACATTCCGCGAAATCGCCGCCCC GCAGGCCGCACTGGCCTTCGTCGGCCCGGGCGGCATGGTCGATCGCATGACCCTGAGTATGACCTGGCAGGCGGCTCCGG CCGATTCCGCCGCCCTTGACCTGGACGTGACGGTCAAAGGAGTGCCGGTGGGAACCCTGACGGTCCCGCCTTCGGGTGGC GAGGTTTCCGTCTCCGTCCCCCGTGGTGCGGCCGGAAGCACCGAATTCATCTCCGTAACCCTCTCCCCCAAAGGGAATAC GGCCGGTTATCGCCTGACCGGTGCCCGGGTTTCATTCTTCCGTTGA
Upstream 100 bases:
>100_bases CGCCTTACCACCGGCGGCCTGCTGCTGACGGCCGGACTGGCCGGCGCATTCAGCGGCAACTACTCCCCCTTCCTCTACTT CAGGTTCTGAGGTCAGCGCG
Downstream 100 bases:
>100_bases TGGTGGGGCGGGTCCGTCCGGTCCACCTTGCAGCCATCCGCCCTTTGGATTACTGTCCCCCGGCTTCGCGCACGGATCAT ACGGCACGGAGTGAGAGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MPLRKIATWLPRLLALCAIALMALPGAQYLFQPFRPPSIREHLPAPPAMPGLSISSFLDGSLQSWVTAVLARDSSARPFA LTARNEAFLRLFPTRPNRFYTYAEPMGFYPVDTIRRLNYDLRNGAAVATVYREAAERVKLLQRLLAAKGVVLMVVAPPPK VRLYPEYLESGWLDAPATEIWSRSPPQYSNALAAQGVLGLNVFEMLWRDRGGYPWPFFATTGFHWSFWTGCMVTARLFET LDGMSGRPWPGVDCSETKVDQASGPDTDIAVVLNIVAPTRLLRPTPFVTAKRRSTAGGEGRKLLVIGDSYSDQIVYHALR LLGPANVVFWDYFAKQRTFNDKMEATITDLSKDGVVRRLVENDFDAVLVVTSDGNVSRDNPSRGEFGFTSAALTELLSRP GTGGQLPDAAFVEGWRPHETFREIAAPQAALAFVGPGGMVDRMTLSMTWQAAPADSAALDLDVTVKGVPVGTLTVPPSGG EVSVSVPRGAAGSTEFISVTLSPKGNTAGYRLTGARVSFFR
Sequences:
>Translated_521_residues MPLRKIATWLPRLLALCAIALMALPGAQYLFQPFRPPSIREHLPAPPAMPGLSISSFLDGSLQSWVTAVLARDSSARPFA LTARNEAFLRLFPTRPNRFYTYAEPMGFYPVDTIRRLNYDLRNGAAVATVYREAAERVKLLQRLLAAKGVVLMVVAPPPK VRLYPEYLESGWLDAPATEIWSRSPPQYSNALAAQGVLGLNVFEMLWRDRGGYPWPFFATTGFHWSFWTGCMVTARLFET LDGMSGRPWPGVDCSETKVDQASGPDTDIAVVLNIVAPTRLLRPTPFVTAKRRSTAGGEGRKLLVIGDSYSDQIVYHALR LLGPANVVFWDYFAKQRTFNDKMEATITDLSKDGVVRRLVENDFDAVLVVTSDGNVSRDNPSRGEFGFTSAALTELLSRP GTGGQLPDAAFVEGWRPHETFREIAAPQAALAFVGPGGMVDRMTLSMTWQAAPADSAALDLDVTVKGVPVGTLTVPPSGG EVSVSVPRGAAGSTEFISVTLSPKGNTAGYRLTGARVSFFR >Mature_520_residues PLRKIATWLPRLLALCAIALMALPGAQYLFQPFRPPSIREHLPAPPAMPGLSISSFLDGSLQSWVTAVLARDSSARPFAL TARNEAFLRLFPTRPNRFYTYAEPMGFYPVDTIRRLNYDLRNGAAVATVYREAAERVKLLQRLLAAKGVVLMVVAPPPKV RLYPEYLESGWLDAPATEIWSRSPPQYSNALAAQGVLGLNVFEMLWRDRGGYPWPFFATTGFHWSFWTGCMVTARLFETL DGMSGRPWPGVDCSETKVDQASGPDTDIAVVLNIVAPTRLLRPTPFVTAKRRSTAGGEGRKLLVIGDSYSDQIVYHALRL LGPANVVFWDYFAKQRTFNDKMEATITDLSKDGVVRRLVENDFDAVLVVTSDGNVSRDNPSRGEFGFTSAALTELLSRPG TGGQLPDAAFVEGWRPHETFREIAAPQAALAFVGPGGMVDRMTLSMTWQAAPADSAALDLDVTVKGVPVGTLTVPPSGGE VSVSVPRGAAGSTEFISVTLSPKGNTAGYRLTGARVSFFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56849; Mature: 56718
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRKIATWLPRLLALCAIALMALPGAQYLFQPFRPPSIREHLPAPPAMPGLSISSFLDG CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHCH SLQSWVTAVLARDSSARPFALTARNEAFLRLFPTRPNRFYTYAEPMGFYPVDTIRRLNYD HHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCEEEECCCCCCCCHHHHHHCCCC LRNGAAVATVYREAAERVKLLQRLLAAKGVVLMVVAPPPKVRLYPEYLESGWLDAPATEI CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHHCCCCCCCHHHH WSRSPPQYSNALAAQGVLGLNVFEMLWRDRGGYPWPFFATTGFHWSFWTGCMVTARLFET HCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH LDGMSGRPWPGVDCSETKVDQASGPDTDIAVVLNIVAPTRLLRPTPFVTAKRRSTAGGEG HCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCHHHCCCCCCEEECCCCCCCCCC RKLLVIGDSYSDQIVYHALRLLGPANVVFWDYFAKQRTFNDKMEATITDLSKDGVVRRLV CEEEEECCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH ENDFDAVLVVTSDGNVSRDNPSRGEFGFTSAALTELLSRPGTGGQLPDAAFVEGWRPHET HCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHH FREIAAPQAALAFVGPGGMVDRMTLSMTWQAAPADSAALDLDVTVKGVPVGTLTVPPSGG HHHHCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECEEEEEEEECCCCC EVSVSVPRGAAGSTEFISVTLSPKGNTAGYRLTGARVSFFR EEEEECCCCCCCCCEEEEEEECCCCCCCCEEEECCEEEECC >Mature Secondary Structure PLRKIATWLPRLLALCAIALMALPGAQYLFQPFRPPSIREHLPAPPAMPGLSISSFLDG CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHCH SLQSWVTAVLARDSSARPFALTARNEAFLRLFPTRPNRFYTYAEPMGFYPVDTIRRLNYD HHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCEEEECCCCCCCCHHHHHHCCCC LRNGAAVATVYREAAERVKLLQRLLAAKGVVLMVVAPPPKVRLYPEYLESGWLDAPATEI CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHHCCCCCCCHHHH WSRSPPQYSNALAAQGVLGLNVFEMLWRDRGGYPWPFFATTGFHWSFWTGCMVTARLFET HCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH LDGMSGRPWPGVDCSETKVDQASGPDTDIAVVLNIVAPTRLLRPTPFVTAKRRSTAGGEG HCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCHHHCCCCCCEEECCCCCCCCCC RKLLVIGDSYSDQIVYHALRLLGPANVVFWDYFAKQRTFNDKMEATITDLSKDGVVRRLV CEEEEECCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH ENDFDAVLVVTSDGNVSRDNPSRGEFGFTSAALTELLSRPGTGGQLPDAAFVEGWRPHET HCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHH FREIAAPQAALAFVGPGGMVDRMTLSMTWQAAPADSAALDLDVTVKGVPVGTLTVPPSGG HHHHCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECEEEEEEEECCCCC EVSVSVPRGAAGSTEFISVTLSPKGNTAGYRLTGARVSFFR EEEEECCCCCCCCCEEEEEEECCCCCCCCEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA