| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310137
Identifier: 83310137
GI number: 83310137
Start: 1100625
End: 1101221
Strand: Reverse
Name: 83310137
Synonym: amb1038
Alternate gene names: NA
Gene position: 1101221-1100625 (Counterclockwise)
Preceding gene: 83310144
Following gene: 83310136
Centisome position: 22.17
GC content: 57.96
Gene sequence:
>597_bases ATGCTCTCTCCGAATCACCATATGGAAAGTACATGGATTAGCACCCGCCCAGATCTCACACTCGCGCAGATTCTCCATGC AACGGCGACCGGCGGGGTTCGCGCAGACTGCGACAGCCGCATGCTGGAAATGCTTATAACGGCCCAATCCATCGCAGTGT CGGAGATCGAGATCCTGATCCCGGATGCGATCGATCAATTGCTCGTACCCGCGCGTCATGGCAACGAAGGTCCCGCGCAT CGAAATCTCCGCCGCCTTGGGCTGGTCTTGGCGAAGGCAATCGACCCGCATGCAGGCGTATCGTTGGAGCATTGGGTCCC CTGTGGCTCGGCCCATGCATTGATCGATATTTTCGCCGAGACTCGCCATGGCCGGATTGCCATCGAATGCGGAACCCGCG ATGGACGTGACATTCCTCGCCTGCTGAAGGCTTCAGCCGATCACGTTGTCATCCTCCCATTTGCCGGTTGGCAAGGGAGC CGTTTCAACGCCTTGGGATTTTCCAACCAGCACGCCCGCCCCCTTCCTCGTATCACCTATACCGCCATGGTTGCTGCACT CGAGATGCAGGACCTTGACGCTATCAACACCATCTAA
Upstream 100 bases:
>100_bases TATTGCACCCAGGGTGTTGACACCTGAGGCGCTTGCAGTTACACTCTAGGGGTAATGACGAATTCCGACCACCAAATTCT AAAGCTGGCTGAGGATCAAA
Downstream 100 bases:
>100_bases ATAAGGACGCCCACTATGCTTAACCTGCCCCAAGATTTCCCCATCACAACAGACACCCTTCTTACCAGTCTTAAGGCGCT GCAACTTCCCTCATTGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MLSPNHHMESTWISTRPDLTLAQILHATATGGVRADCDSRMLEMLITAQSIAVSEIEILIPDAIDQLLVPARHGNEGPAH RNLRRLGLVLAKAIDPHAGVSLEHWVPCGSAHALIDIFAETRHGRIAIECGTRDGRDIPRLLKASADHVVILPFAGWQGS RFNALGFSNQHARPLPRITYTAMVAALEMQDLDAINTI
Sequences:
>Translated_198_residues MLSPNHHMESTWISTRPDLTLAQILHATATGGVRADCDSRMLEMLITAQSIAVSEIEILIPDAIDQLLVPARHGNEGPAH RNLRRLGLVLAKAIDPHAGVSLEHWVPCGSAHALIDIFAETRHGRIAIECGTRDGRDIPRLLKASADHVVILPFAGWQGS RFNALGFSNQHARPLPRITYTAMVAALEMQDLDAINTI >Mature_198_residues MLSPNHHMESTWISTRPDLTLAQILHATATGGVRADCDSRMLEMLITAQSIAVSEIEILIPDAIDQLLVPARHGNEGPAH RNLRRLGLVLAKAIDPHAGVSLEHWVPCGSAHALIDIFAETRHGRIAIECGTRDGRDIPRLLKASADHVVILPFAGWQGS RFNALGFSNQHARPLPRITYTAMVAALEMQDLDAINTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21605; Mature: 21605
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSPNHHMESTWISTRPDLTLAQILHATATGGVRADCDSRMLEMLITAQSIAVSEIEILI CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEC PDAIDQLLVPARHGNEGPAHRNLRRLGLVLAKAIDPHAGVSLEHWVPCGSAHALIDIFAE HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHH TRHGRIAIECGTRDGRDIPRLLKASADHVVILPFAGWQGSRFNALGFSNQHARPLPRITY CCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCHHHH TAMVAALEMQDLDAINTI HHHHHHHHHHHCHHHCCC >Mature Secondary Structure MLSPNHHMESTWISTRPDLTLAQILHATATGGVRADCDSRMLEMLITAQSIAVSEIEILI CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEC PDAIDQLLVPARHGNEGPAHRNLRRLGLVLAKAIDPHAGVSLEHWVPCGSAHALIDIFAE HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHH TRHGRIAIECGTRDGRDIPRLLKASADHVVILPFAGWQGSRFNALGFSNQHARPLPRITY CCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCHHHH TAMVAALEMQDLDAINTI HHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA