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The map label for this gene is insD1 [C]

Identifier: 83310131

GI number: 83310131

Start: 1094727

End: 1095977

Strand: Reverse

Name: insD1 [C]

Synonym: amb1032

Alternate gene names: 83310131

Gene position: 1095977-1094727 (Counterclockwise)

Preceding gene: 83310132

Following gene: 83310130

Centisome position: 22.06

GC content: 61.87

Gene sequence:

>1251_bases
GTGAGGCCCGCCGCCAAGCGAGAAGCTGTCGCCCATCTGCGAAGCCAATTCGAGATGAGCGAGCGTCGGGCCTGTGCGGT
GATTGCCGCCGACCGTATGACGATCCGCTACCGGTCGCGCCGCCCCAGGGACGAGGCGCTGCGTGCCCGCCTGCGGGACT
TGGCCAACCTCCGGCGGCGTTTCGGCTATCGTCGGCTGTTCATCCTGCTGCACGAGACGGGGGAGCCATCGGGACTGAGC
CGTATCTATCGGCTTTATCGCGAGGAGGGCTTGGCGGTGCGCAAGCGTAAGACCCGGCGCAAGGCCATTGGCAGCCGTGC
CCCGATCCTGGTCGAGGCCCGCGCCAACGCCCGCTGGTCGCTGGACTTCGTCCATGACCAATTGGCCTGTGGACGGCGGT
TCCGCATCCTCAACGTGGTCGACGACGTGACGCGGGAGTGCCTGGCCGCCATTCCCGACACCTCGATCTCGGGGGCCAGG
GTGACCCGTGAACTGTCGGCGCTGATTGCTCGGCGAGGGCGACCAGAGATGATCGTCTCGGACAACGGCACCGAGCTGAC
GTCCAATGCCGTCCTGGCCTGGAAACAGCAGCAGCGGATCGACTGGCATTACATCGCGCCGGGAAAGCCCATGCAGAACG
GCTTCGTCGAAAGCTTCAATGGCCGCATGCGCGACGAGTTGCTCAACGAGACGGTCTTCACCAGCCTGCCCCAGGCCCGG
GCCGTCATCGCCGCCTGGGCGGACGACTACAACACCGCCAGACCACACTCATCCCTGGGATACCAGACCCCGGCGGCGCA
CGCCGCCAAACTCAAGGCAATGGGGCCATCCTCTCCGCCCCTCCGGGGCTCCGAGCCCGGCCCCATTGCCCACACCGCGC
CAGACGGCATAACTTTGCCAAAGGCTCTACTTTTCGCCGGAGGAAAGTTCCCGAGCAGGTCAGCTCGACGGCGAGATTTT
CACCACCATGCCCACGACGAACCCGTCCGGAATCGCCATCAAAATCGACATCCTATGCCCATCTGGCGACAGGATGTCGA
TTTTCGGATCTTCATCACCATGCTGACACCAAGTGTGAAGCGATCTCCCAGATCAAAATTCCATTGTGTACGCGAGGCGA
CGACCAACTCACTGGTAACAGGTTTCGATTCCGCATTAATTAGCGCCGGGTTAGCCCATAAATCTGCCAATTCACAAACA
ACGTTCGATCTGTTTGCAGAAAAAAATAGACCCCCACTTCACTTTTTATAG

Upstream 100 bases:

>100_bases
GGCTGAAAGCGCTTGAGGACGAGAACGCCCAGCTGAAGAAGCTGCTGGCGGAATCCATGCTGAACGAGGCCGCGCTCCGC
GATCTGCTGGGAAAAAAATG

Downstream 100 bases:

>100_bases
TGACTTTCGCTACCATGATTCAATGCAACATGGAGCACGACATGGATCACCTCATTACCCCCGGAGAGCTTATGACGATT
CTGAGGCTTCCAAGCCTTAA

Product: transposase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MRPAAKREAVAHLRSQFEMSERRACAVIAADRMTIRYRSRRPRDEALRARLRDLANLRRRFGYRRLFILLHETGEPSGLS
RIYRLYREEGLAVRKRKTRRKAIGSRAPILVEARANARWSLDFVHDQLACGRRFRILNVVDDVTRECLAAIPDTSISGAR
VTRELSALIARRGRPEMIVSDNGTELTSNAVLAWKQQQRIDWHYIAPGKPMQNGFVESFNGRMRDELLNETVFTSLPQAR
AVIAAWADDYNTARPHSSLGYQTPAAHAAKLKAMGPSSPPLRGSEPGPIAHTAPDGITLPKALLFAGGKFPSRSARRRDF
HHHAHDEPVRNRHQNRHPMPIWRQDVDFRIFITMLTPSVKRSPRSKFHCVREATTNSLVTGFDSALISAGLAHKSANSQT
TFDLFAEKNRPPLHFL

Sequences:

>Translated_416_residues
MRPAAKREAVAHLRSQFEMSERRACAVIAADRMTIRYRSRRPRDEALRARLRDLANLRRRFGYRRLFILLHETGEPSGLS
RIYRLYREEGLAVRKRKTRRKAIGSRAPILVEARANARWSLDFVHDQLACGRRFRILNVVDDVTRECLAAIPDTSISGAR
VTRELSALIARRGRPEMIVSDNGTELTSNAVLAWKQQQRIDWHYIAPGKPMQNGFVESFNGRMRDELLNETVFTSLPQAR
AVIAAWADDYNTARPHSSLGYQTPAAHAAKLKAMGPSSPPLRGSEPGPIAHTAPDGITLPKALLFAGGKFPSRSARRRDF
HHHAHDEPVRNRHQNRHPMPIWRQDVDFRIFITMLTPSVKRSPRSKFHCVREATTNSLVTGFDSALISAGLAHKSANSQT
TFDLFAEKNRPPLHFL
>Mature_416_residues
MRPAAKREAVAHLRSQFEMSERRACAVIAADRMTIRYRSRRPRDEALRARLRDLANLRRRFGYRRLFILLHETGEPSGLS
RIYRLYREEGLAVRKRKTRRKAIGSRAPILVEARANARWSLDFVHDQLACGRRFRILNVVDDVTRECLAAIPDTSISGAR
VTRELSALIARRGRPEMIVSDNGTELTSNAVLAWKQQQRIDWHYIAPGKPMQNGFVESFNGRMRDELLNETVFTSLPQAR
AVIAAWADDYNTARPHSSLGYQTPAAHAAKLKAMGPSSPPLRGSEPGPIAHTAPDGITLPKALLFAGGKFPSRSARRRDF
HHHAHDEPVRNRHQNRHPMPIWRQDVDFRIFITMLTPSVKRSPRSKFHCVREATTNSLVTGFDSALISAGLAHKSANSQT
TFDLFAEKNRPPLHFL

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 47192; Mature: 47192

Theoretical pI: Translated: 11.64; Mature: 11.64

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPAAKREAVAHLRSQFEMSERRACAVIAADRMTIRYRSRRPRDEALRARLRDLANLRRR
CCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHH
FGYRRLFILLHETGEPSGLSRIYRLYREEGLAVRKRKTRRKAIGSRAPILVEARANARWS
CCCEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEE
LDFVHDQLACGRRFRILNVVDDVTRECLAAIPDTSISGARVTRELSALIARRGRPEMIVS
HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEC
DNGTELTSNAVLAWKQQQRIDWHYIAPGKPMQNGFVESFNGRMRDELLNETVFTSLPQAR
CCCCEECCCCEEEEHHHCCCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCHHH
AVIAAWADDYNTARPHSSLGYQTPAAHAAKLKAMGPSSPPLRGSEPGPIAHTAPDGITLP
HEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
KALLFAGGKFPSRSARRRDFHHHAHDEPVRNRHQNRHPMPIWRQDVDFRIFITMLTPSVK
HHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHCCCCEEEEEEEECCHHH
RSPRSKFHCVREATTNSLVTGFDSALISAGLAHKSANSQTTFDLFAEKNRPPLHFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCCCCCC
>Mature Secondary Structure
MRPAAKREAVAHLRSQFEMSERRACAVIAADRMTIRYRSRRPRDEALRARLRDLANLRRR
CCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHH
FGYRRLFILLHETGEPSGLSRIYRLYREEGLAVRKRKTRRKAIGSRAPILVEARANARWS
CCCEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEE
LDFVHDQLACGRRFRILNVVDDVTRECLAAIPDTSISGARVTRELSALIARRGRPEMIVS
HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEC
DNGTELTSNAVLAWKQQQRIDWHYIAPGKPMQNGFVESFNGRMRDELLNETVFTSLPQAR
CCCCEECCCCEEEEHHHCCCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCHHH
AVIAAWADDYNTARPHSSLGYQTPAAHAAKLKAMGPSSPPLRGSEPGPIAHTAPDGITLP
HEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
KALLFAGGKFPSRSARRRDFHHHAHDEPVRNRHQNRHPMPIWRQDVDFRIFITMLTPSVK
HHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHCCCCEEEEEEEECCHHH
RSPRSKFHCVREATTNSLVTGFDSALISAGLAHKSANSQTTFDLFAEKNRPPLHFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]