| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is fur [H]
Identifier: 83310108
GI number: 83310108
Start: 1069767
End: 1070192
Strand: Reverse
Name: fur [H]
Synonym: amb1009
Alternate gene names: 83310108
Gene position: 1070192-1069767 (Counterclockwise)
Preceding gene: 83310110
Following gene: 83310107
Centisome position: 21.55
GC content: 61.03
Gene sequence:
>426_bases ATGATTTCTCGAATCGAACAACGTTGCATCGACAAGAACATGAAGATGACCGGCCAGCGCCGGGTCATCGCCCGCGTCCT GTCCGAGTCCTCCGACCATCCGGATGTGGAGGAAGTCTACCGCCGGGCGGCCGAGATCGATCCCCATATCAGCATCGCCA CGGTCTATCGCACCGTGCGGCTGTTCGAGGAAACGGCCATCTTGAAGCGGCACGATTTCGGCGACGGCCGCGCCCGCTAC GAAGAAGCTGACGGTGATCACCACGATCACCTGATCGACCTGAAAACCGGCAAGGTCATCGAATTCTCCAGCGAGGAGAT CGAATCCCTGCAAAAGGAAATCGCCACGCGCTACGGCTACCGGGTCGTGGGCCACCGCCTGGAGCTGTTCGGAGTTCCGC TGGCCGCCGACGAAACCGCCGACTGA
Upstream 100 bases:
>100_bases ACGGCAGCGAAACGCGCGGTTGCGCTCTCGCGCTTTGCCAACCTCTCCCTTGATGGTACCGTTCCCCCTGAACCGGCAGG AAAAATCGGATGAGACGGCC
Downstream 100 bases:
>100_bases GGCGGGCGCCCCCCCCTCAAGCGGCACGGCAATCCGCGCGGCTCATCGGGGGCGATGCGAATACCCATTGACAATGAGTG GCAATTGCGGCTTTCTGTAG
Product: Fe2+/Zn2+ uptake regulation protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MISRIEQRCIDKNMKMTGQRRVIARVLSESSDHPDVEEVYRRAAEIDPHISIATVYRTVRLFEETAILKRHDFGDGRARY EEADGDHHDHLIDLKTGKVIEFSSEEIESLQKEIATRYGYRVVGHRLELFGVPLAADETAD
Sequences:
>Translated_141_residues MISRIEQRCIDKNMKMTGQRRVIARVLSESSDHPDVEEVYRRAAEIDPHISIATVYRTVRLFEETAILKRHDFGDGRARY EEADGDHHDHLIDLKTGKVIEFSSEEIESLQKEIATRYGYRVVGHRLELFGVPLAADETAD >Mature_141_residues MISRIEQRCIDKNMKMTGQRRVIARVLSESSDHPDVEEVYRRAAEIDPHISIATVYRTVRLFEETAILKRHDFGDGRARY EEADGDHHDHLIDLKTGKVIEFSSEEIESLQKEIATRYGYRVVGHRLELFGVPLAADETAD
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=119, Percent_Identity=42.0168067226891, Blast_Score=97, Evalue=3e-22,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16238; Mature: 16238
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRIEQRCIDKNMKMTGQRRVIARVLSESSDHPDVEEVYRRAAEIDPHISIATVYRTVR CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH LFEETAILKRHDFGDGRARYEEADGDHHDHLIDLKTGKVIEFSSEEIESLQKEIATRYGY HHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHHHHHHH RVVGHRLELFGVPLAADETAD HHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MISRIEQRCIDKNMKMTGQRRVIARVLSESSDHPDVEEVYRRAAEIDPHISIATVYRTVR CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH LFEETAILKRHDFGDGRARYEEADGDHHDHLIDLKTGKVIEFSSEEIESLQKEIATRYGY HHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHHHHHHH RVVGHRLELFGVPLAADETAD HHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9835040 [H]