Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83310041

Identifier: 83310041

GI number: 83310041

Start: 1007200

End: 1008204

Strand: Reverse

Name: 83310041

Synonym: amb0943

Alternate gene names: NA

Gene position: 1008204-1007200 (Counterclockwise)

Preceding gene: 83310043

Following gene: 83310034

Centisome position: 20.3

GC content: 62.29

Gene sequence:

>1005_bases
ATGGCTGTCCTGGTTTATCACTTCTTCATCAAGGCGGTGGGGATCTTGTTGTTTGCGGTGGAAATAGGATGGTTCGTGTT
TCTGCCGTTCTGGAACGAGGCCAAGGAGTGGTGGAAACGTCGCGAAACCATCGGACGGTCACGGCGGTCCTTGCTGCCGG
TGGGGTTCTTTGTTGCCACGCTTGTCCTGGCCCTGGTCCCGTGGCGCGCCCATGTCAGCGCGCCTGCCGTCATGAAAGCG
GAACGCCATCTGGAGCTTTATGCCGCCAGCCCGGCCCGGATTGAACGCATCTTGATGGTGGAGGGAAGGCAGGTCGCCGA
GGGTGAGTCCTTGGCGCTGCTATCCTCCCCCGATCTTGAGTATCGCCTGGCCCAGGTGGAGCGGCGAATCCTGGTCCTGG
AATACGAACTGGCGTCGTTCTCATTCGATGCATCTTTCCGCGAGCGGTCCCAGGCCCTGCGCGAGGAATTGGAAACCGCC
ATCGCCGAGCGGGTCTCATTGCAGCGGGAGTTGGCCCGGCTTTCCGTCACAGCCCCCATGGCGGGCAGGGTCGTGGATAT
GATTCCCGATCTTCAGATCGGGCAGTGGATTTCTCCCAGGGAGCGCCTTGCCCAACTGGCAGGGACCGGAGCCTTGGCGG
TCGAAGCCTTCGTGGCCGAAAGCGATGTGGGAAGACTTCGCATTGGGAACGAGGGGCGGTTTGTTGCCGATGACCCGGGC
CGCCCCGACCTGCCGTGCAGGATTGCTACCATCGACAGCGGGGCCATCCGCAGCCTGACGGAACCGGTGCTTGCCTCGGT
GGCTGGCGGCCCGATTCAAGTTCGCGCCAAGGACAAGTCATTGGTTCCCGATCAGGCCCTGTACCGGATTCGCTGTGTCG
GCACCATCCCTGCACAGGCCACCCAGTTGCGAGGAATGGCTGTCCTGAAGGCCGAGCCGGAAAGTATAGCGGGTTTCATC
CTGCGATCGGCAGCCGCGGCTCTGCTGCGGGAAAGCGGAATGTGA

Upstream 100 bases:

>100_bases
ATCCCGCCCCTGTGGCTCACGTCGCTGTGTCGAGCGTGGCTGTCCCAGCACCAGGCAAGTCCGGCGCTCCTCTTTCTGTG
CATTCGAGGCATTGGCGGTC

Downstream 100 bases:

>100_bases
TGGAAATACGCGGTCGCCGTAACGGTACGGGAGGCAACGGAGGCTTTCAGCCGTGCCTCTTTGGCGGAACGGTCCCGCAG
CGATTGGTAATTCTGCCGCT

Product: membrane-fusion protein

Products: NA

Alternate protein names: Membrane-Fusion Protein; Peptidase; Peptidase Family M; HlyD Domain-Containing Protein; Zinc Metallopeptidase; Membrane Zinc Metallopeptidase; M50 Family Peptidase; Zn-Dependent Protease

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MAVLVYHFFIKAVGILLFAVEIGWFVFLPFWNEAKEWWKRRETIGRSRRSLLPVGFFVATLVLALVPWRAHVSAPAVMKA
ERHLELYAASPARIERILMVEGRQVAEGESLALLSSPDLEYRLAQVERRILVLEYELASFSFDASFRERSQALREELETA
IAERVSLQRELARLSVTAPMAGRVVDMIPDLQIGQWISPRERLAQLAGTGALAVEAFVAESDVGRLRIGNEGRFVADDPG
RPDLPCRIATIDSGAIRSLTEPVLASVAGGPIQVRAKDKSLVPDQALYRIRCVGTIPAQATQLRGMAVLKAEPESIAGFI
LRSAAAALLRESGM

Sequences:

>Translated_334_residues
MAVLVYHFFIKAVGILLFAVEIGWFVFLPFWNEAKEWWKRRETIGRSRRSLLPVGFFVATLVLALVPWRAHVSAPAVMKA
ERHLELYAASPARIERILMVEGRQVAEGESLALLSSPDLEYRLAQVERRILVLEYELASFSFDASFRERSQALREELETA
IAERVSLQRELARLSVTAPMAGRVVDMIPDLQIGQWISPRERLAQLAGTGALAVEAFVAESDVGRLRIGNEGRFVADDPG
RPDLPCRIATIDSGAIRSLTEPVLASVAGGPIQVRAKDKSLVPDQALYRIRCVGTIPAQATQLRGMAVLKAEPESIAGFI
LRSAAAALLRESGM
>Mature_333_residues
AVLVYHFFIKAVGILLFAVEIGWFVFLPFWNEAKEWWKRRETIGRSRRSLLPVGFFVATLVLALVPWRAHVSAPAVMKAE
RHLELYAASPARIERILMVEGRQVAEGESLALLSSPDLEYRLAQVERRILVLEYELASFSFDASFRERSQALREELETAI
AERVSLQRELARLSVTAPMAGRVVDMIPDLQIGQWISPRERLAQLAGTGALAVEAFVAESDVGRLRIGNEGRFVADDPGR
PDLPCRIATIDSGAIRSLTEPVLASVAGGPIQVRAKDKSLVPDQALYRIRCVGTIPAQATQLRGMAVLKAEPESIAGFIL
RSAAAALLRESGM

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36883; Mature: 36752

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLVYHFFIKAVGILLFAVEIGWFVFLPFWNEAKEWWKRRETIGRSRRSLLPVGFFVAT
CEEHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LVLALVPWRAHVSAPAVMKAERHLELYAASPARIERILMVEGRQVAEGESLALLSSPDLE
HHHHHCCHHHCCCCCHHHHHHHCEEEEECCHHHHHEEEEECCCEECCCCCEEEECCCCHH
YRLAQVERRILVLEYELASFSFDASFRERSQALREELETAIAERVSLQRELARLSVTAPM
HHHHHHHCEEEEEEEEHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
AGRVVDMIPDLQIGQWISPRERLAQLAGTGALAVEAFVAESDVGRLRIGNEGRFVADDPG
CCHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCEEECCCC
RPDLPCRIATIDSGAIRSLTEPVLASVAGGPIQVRAKDKSLVPDQALYRIRCVGTIPAQA
CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHEEEEEEECCCCHH
TQLRGMAVLKAEPESIAGFILRSAAAALLRESGM
HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVLVYHFFIKAVGILLFAVEIGWFVFLPFWNEAKEWWKRRETIGRSRRSLLPVGFFVAT
EEHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LVLALVPWRAHVSAPAVMKAERHLELYAASPARIERILMVEGRQVAEGESLALLSSPDLE
HHHHHCCHHHCCCCCHHHHHHHCEEEEECCHHHHHEEEEECCCEECCCCCEEEECCCCHH
YRLAQVERRILVLEYELASFSFDASFRERSQALREELETAIAERVSLQRELARLSVTAPM
HHHHHHHCEEEEEEEEHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
AGRVVDMIPDLQIGQWISPRERLAQLAGTGALAVEAFVAESDVGRLRIGNEGRFVADDPG
CCHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCEEECCCC
RPDLPCRIATIDSGAIRSLTEPVLASVAGGPIQVRAKDKSLVPDQALYRIRCVGTIPAQA
CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHEEEEEEECCCCHH
TQLRGMAVLKAEPESIAGFILRSAAAALLRESGM
HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA