| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310013
Identifier: 83310013
GI number: 83310013
Start: 983206
End: 983484
Strand: Reverse
Name: 83310013
Synonym: amb0914
Alternate gene names: NA
Gene position: 983484-983206 (Counterclockwise)
Preceding gene: 83310014
Following gene: 83310012
Centisome position: 19.8
GC content: 60.93
Gene sequence:
>279_bases ATGCCGAAGAAGAGACATACCGCCGAAGAGATCATCGGCAAGCTGCGTGAAGCGGACGTGCTTCTGGCGCAAGGCCGGAA GGTGGCCGACGTCGCCAAGGCGCTGTCGGTGACGGAAGTGACGTACTACCGCTGGCGCCAGGAATACGGAGGGATGAAGG TCTCTCAGGCCAAGCGGCTCAAGGAGCTTGAGCGCGAGAACGATCGGCTGCGCAAGGCGGTGGCTGACCTGACCATCGAC AAGCTGATTTTGAAGGAGGCCGCCTGGGGAAACTTCTGA
Upstream 100 bases:
>100_bases AATTCATCCGGCTATTTCCAAAGCCCGATAGACGGATTGCCCCCCGTGAATGGCTCCATGTTGAATGTAATAATTCAACT GACCATGAAGGGGACATTCC
Downstream 100 bases:
>100_bases GCCCCGCCCGTCGCCGGTGTTGCATCATGGCGGTGTGCGAGCGGTTGGCGGTGTCGGAGCGCCGGGCTTGCCTGGTGTTG GGACAGCCCCGCTCGCCGAT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MPKKRHTAEEIIGKLREADVLLAQGRKVADVAKALSVTEVTYYRWRQEYGGMKVSQAKRLKELERENDRLRKAVADLTID KLILKEAAWGNF
Sequences:
>Translated_92_residues MPKKRHTAEEIIGKLREADVLLAQGRKVADVAKALSVTEVTYYRWRQEYGGMKVSQAKRLKELERENDRLRKAVADLTID KLILKEAAWGNF >Mature_91_residues PKKRHTAEEIIGKLREADVLLAQGRKVADVAKALSVTEVTYYRWRQEYGGMKVSQAKRLKELERENDRLRKAVADLTIDK LILKEAAWGNF
Specific function: Unknown
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 10613; Mature: 10482
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKKRHTAEEIIGKLREADVLLAQGRKVADVAKALSVTEVTYYRWRQEYGGMKVSQAKRL CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KELERENDRLRKAVADLTIDKLILKEAAWGNF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PKKRHTAEEIIGKLREADVLLAQGRKVADVAKALSVTEVTYYRWRQEYGGMKVSQAKRL CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KELERENDRLRKAVADLTIDKLILKEAAWGNF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2544911 [H]