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The map label for this gene is 83309993

Identifier: 83309993

GI number: 83309993

Start: 953984

End: 954685

Strand: Reverse

Name: 83309993

Synonym: amb0894

Alternate gene names: NA

Gene position: 954685-953984 (Counterclockwise)

Preceding gene: 83309994

Following gene: 83309992

Centisome position: 19.22

GC content: 63.11

Gene sequence:

>702_bases
ATGCTGAGAGCCCTTGATCACCTTGAAGAATGGCTGATTGCCTTTCTCATGGGCACGGCGACGCTGATCATCTTCGTCGC
CGTTCTGCAACGCTATGCGGCAGGCACCGCCCTGCTGTATCCCCTGGTCGGGCACCTGGATTTTTCCTGGGCCCAGGAAC
TGTGCATCATCATGTTCGTGTGGATGGCCAAGTTCGGCGCCGCCTATGGCGTACGCACCGGCATCCACGTGGGCGTCGAC
GTGGTCATCAACCGCCTCGATCCCCAATGGCGGGCCAAGCTGATCGTATTCGGCCTGCTGGCCGGCGCGCTGTTCACCGG
CATCGTCGCCACCATGGGCGGCCATTTCGTCATGGAGAACGGCGCCCATTACGCCTTCCTCCACGCCTTCGGCCTGCCCA
CCGGCGATCTCTACGAAGGCCCCATCACCCCGGACATGGAGGCCCCCACCTGGGTGGTCTATTCGGCCATTCCGCTGGGC
TCGGCCCTGATGTGCTTCCGCTTCCTGCAGGTCTGCGTCGGCTTCATCCGGACCGGCGAGCTGCCCCATCACGACCACGG
CCATGTGGAAGGGCTGGAAGAGGACACCACCGATCCCCAGCGCGCCGCCCAGGACATCAACTGGTTCGAGATGTCGGACA
ATCTTCACCCCAAGGACGCCAAAGACGACAAGGGTGATCACCAGGGGGAGAAGCGGCCATGA

Upstream 100 bases:

>100_bases
CGGCTTCAAGAACTGATTCCGGTCTGATGGCGAAGGGGCGTGTTGGGCGCCCCTTCGTCCCTCGTCCGCTTCCAATCCTT
CGGCTTTCGTGGGAGGCCCC

Downstream 100 bases:

>100_bases
ACTCCGCCGTCATCTTCGGGCTGCTGATCGTGCTGATGCTGACCGGCATGCCCATTTCCATCTCGCTGGGCCTCACCGTC
CTGTCGTTTCTGTTCCTCTT

Product: TRAP-type C4-dicarboxylate transport system

Products: NA

Alternate protein names: C4-Dicarboxylate Transport System Permease Small Subunit; C4-Dicarboxylate Transport Protein DctQ; TRAP-Type C4-Dicarboxylate Transport System Small Permease; Tripartite ATP-Independent Periplasmic Transporter; TRAP-Type C4-Dicarboxylate Transport System; Trap Transporter Dctq Subunit; C4-Dicarboxylate Transport System Small Permease Component; TRAP Dicarboxylate Family Transporter DctQ Subunit; C4-Dicarboxylate Transporter Small Subunit; TRAP Transporter DctQ Subunit

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MLRALDHLEEWLIAFLMGTATLIIFVAVLQRYAAGTALLYPLVGHLDFSWAQELCIIMFVWMAKFGAAYGVRTGIHVGVD
VVINRLDPQWRAKLIVFGLLAGALFTGIVATMGGHFVMENGAHYAFLHAFGLPTGDLYEGPITPDMEAPTWVVYSAIPLG
SALMCFRFLQVCVGFIRTGELPHHDHGHVEGLEEDTTDPQRAAQDINWFEMSDNLHPKDAKDDKGDHQGEKRP

Sequences:

>Translated_233_residues
MLRALDHLEEWLIAFLMGTATLIIFVAVLQRYAAGTALLYPLVGHLDFSWAQELCIIMFVWMAKFGAAYGVRTGIHVGVD
VVINRLDPQWRAKLIVFGLLAGALFTGIVATMGGHFVMENGAHYAFLHAFGLPTGDLYEGPITPDMEAPTWVVYSAIPLG
SALMCFRFLQVCVGFIRTGELPHHDHGHVEGLEEDTTDPQRAAQDINWFEMSDNLHPKDAKDDKGDHQGEKRP
>Mature_233_residues
MLRALDHLEEWLIAFLMGTATLIIFVAVLQRYAAGTALLYPLVGHLDFSWAQELCIIMFVWMAKFGAAYGVRTGIHVGVD
VVINRLDPQWRAKLIVFGLLAGALFTGIVATMGGHFVMENGAHYAFLHAFGLPTGDLYEGPITPDMEAPTWVVYSAIPLG
SALMCFRFLQVCVGFIRTGELPHHDHGHVEGLEEDTTDPQRAAQDINWFEMSDNLHPKDAKDDKGDHQGEKRP

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25861; Mature: 25861

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRALDHLEEWLIAFLMGTATLIIFVAVLQRYAAGTALLYPLVGHLDFSWAQELCIIMFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHH
WMAKFGAAYGVRTGIHVGVDVVINRLDPQWRAKLIVFGLLAGALFTGIVATMGGHFVMEN
HHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
GAHYAFLHAFGLPTGDLYEGPITPDMEAPTWVVYSAIPLGSALMCFRFLQVCVGFIRTGE
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCC
LPHHDHGHVEGLEEDTTDPQRAAQDINWFEMSDNLHPKDAKDDKGDHQGEKRP
CCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRALDHLEEWLIAFLMGTATLIIFVAVLQRYAAGTALLYPLVGHLDFSWAQELCIIMFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHH
WMAKFGAAYGVRTGIHVGVDVVINRLDPQWRAKLIVFGLLAGALFTGIVATMGGHFVMEN
HHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
GAHYAFLHAFGLPTGDLYEGPITPDMEAPTWVVYSAIPLGSALMCFRFLQVCVGFIRTGE
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCC
LPHHDHGHVEGLEEDTTDPQRAAQDINWFEMSDNLHPKDAKDDKGDHQGEKRP
CCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA