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The map label for this gene is 83309880

Identifier: 83309880

GI number: 83309880

Start: 838662

End: 839117

Strand: Reverse

Name: 83309880

Synonym: amb0781

Alternate gene names: NA

Gene position: 839117-838662 (Counterclockwise)

Preceding gene: 83309883

Following gene: 83309875

Centisome position: 16.89

GC content: 64.25

Gene sequence:

>456_bases
ATGCCTGATACAGAAAAGCAGCCGCAACTTCAGAGCGGTCAAGTCAGAGACCAACTGAACATCATGCCGACACGCGCCGA
GGCAAAACCTGCCCGCCCCATGAACCGGGCCAACGATACCGACAGACATGTGGGAAGCCGCATCCGCGAGCGACGCATCA
TGCTCGGGCTATCCCAGCAGCAGATGGCCGACCTGATCGGCGTCACCTACCAGCAGGCCCATAAGTACGAGCGCGGCATC
AACCGCATCTCGGCGGGACGGCTGTTCGAGATCGCCCAGGTGCTGGGCGTTCCGGTGGGCTTCTTCTATGAAGGCCTGGA
GAACCGCCGGGGCAGCGACCTGTCCGCCCGCCAGCGCATGTGCCTGGAGCTGGCCCGCAACTTCACCTCCATCACCAACG
AGCGCCACCAGGAAGCCCTGTCACAGCTCGCCCGGGCCCTGGCCGCCGAGGACTGA

Upstream 100 bases:

>100_bases
TGTACTCACACCGGTAAATACTGATTGCGGGTTTCCGATATACTTCCAGTTTCGGGTTGCTTGCCTAACCAATTCCGACT
ATGCACGGGGAAAGGTAGCC

Downstream 100 bases:

>100_bases
GACGGCCCATCGGGCGGCGTCTTGGATCAGCGGCGACGGATCATCCCGTCGCCGTTCCGCCTCGGCCAGAAGATCCGTCT
GCCCGCCATTGGCGGCGGCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MPDTEKQPQLQSGQVRDQLNIMPTRAEAKPARPMNRANDTDRHVGSRIRERRIMLGLSQQQMADLIGVTYQQAHKYERGI
NRISAGRLFEIAQVLGVPVGFFYEGLENRRGSDLSARQRMCLELARNFTSITNERHQEALSQLARALAAED

Sequences:

>Translated_151_residues
MPDTEKQPQLQSGQVRDQLNIMPTRAEAKPARPMNRANDTDRHVGSRIRERRIMLGLSQQQMADLIGVTYQQAHKYERGI
NRISAGRLFEIAQVLGVPVGFFYEGLENRRGSDLSARQRMCLELARNFTSITNERHQEALSQLARALAAED
>Mature_150_residues
PDTEKQPQLQSGQVRDQLNIMPTRAEAKPARPMNRANDTDRHVGSRIRERRIMLGLSQQQMADLIGVTYQQAHKYERGIN
RISAGRLFEIAQVLGVPVGFFYEGLENRRGSDLSARQRMCLELARNFTSITNERHQEALSQLARALAAED

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 17176; Mature: 17045

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTEKQPQLQSGQVRDQLNIMPTRAEAKPARPMNRANDTDRHVGSRIRERRIMLGLSQQ
CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHH
QMADLIGVTYQQAHKYERGINRISAGRLFEIAQVLGVPVGFFYEGLENRRGSDLSARQRM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHH
CLELARNFTSITNERHQEALSQLARALAAED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PDTEKQPQLQSGQVRDQLNIMPTRAEAKPARPMNRANDTDRHVGSRIRERRIMLGLSQQ
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHH
QMADLIGVTYQQAHKYERGINRISAGRLFEIAQVLGVPVGFFYEGLENRRGSDLSARQRM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHH
CLELARNFTSITNERHQEALSQLARALAAED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]