| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is thrB
Identifier: 83309862
GI number: 83309862
Start: 819536
End: 820516
Strand: Reverse
Name: thrB
Synonym: amb0763
Alternate gene names: 83309862
Gene position: 820516-819536 (Counterclockwise)
Preceding gene: 83309863
Following gene: 83309861
Centisome position: 16.52
GC content: 66.06
Gene sequence:
>981_bases ATGGCCGTCTACACCGAGGTATCCGACGACGAACTGGAAGACTTCGCCGCCGAATACGACATCGGTCAGGTGGTATCGTG CAAGGGCATCGCCGAGGGCGTCGAAAATACCAATTACCTGCTGCAGACCGACCAGGGGAACTACATCCTCACCCTCTACG AGAAGCGGGTGAACCCGGAGGAGCTGCCGTTCTTCCTGGGCCTGATGGAGCATCTGGCCGCCCACGGCCTAGCCTGCCCC ACACCCATCCATGGCCGCGACGGCAAGGCGCTGCGCACGCTGTGCGGCCGCCCGGCGGCCATCGTCAGCTTCCTCAAGGG CATGTGGAGCCGCCGCATCACCCTCGGCCACTGCGCCGAGCTGGGTCCGGCCATGGCCACCATGCACCTGGCGGGTGCCG ATTTTCCCCTGACCCGGGCCAACAACCTGTCGGTCGCCGGCTGGCGGCCACTGTTCGAGTCCATCCGGCCCCGCGCCGCC GAGATCAAGTCGGATCTGGCGCAGAGCATCGAGGACGAACTGGACTACCTGGAGGCCCACTGGCCCAGGACCCTGCCGGT GGGGCTGATCCACGCCGACCTGTTTCCCGACAACGTATTCTTCCTGGCCGACAAGGCGGCGGGCGTCGACCGCATGTCGG GCTTCATCGATTTCTACTTCGCCTGCACCGATGTGCTGGCCTACGACATCGCCATCTGCCTCAACGCCTGGTGCTTCGAG GAGGATGGCGCCTTCAACGCCACCAAGGCCCGCCTGATGCTCAACGGCTATCGCCGGGTGCGTCCGCTGTCGGCCGATGA GCTGGACGCCCTGCCGCTGCTGGCCCGCGGCGCAGCCATGCGTTTCCTGCTGACGCGCAGCTACGACTGGTTGCACACCC CGCCCGGCGCCATGGTCAAGCGCAAGGACCCCATGGAATATTACCGCAAGCTCCGCTTCCACCAGGGCGTCACCGGCCCG GGCCAGTACGGCATCGAATGA
Upstream 100 bases:
>100_bases CCTTGGGACATGGGGAAAGCCGCCTCTCTCCGCTGGCATCATCGGCGGAAACATCGTACCTTCCGCCCAATTCCCCCCCC CTGGACCAAGTCGAGAGAGC
Downstream 100 bases:
>100_bases GCGAGACAGCTCCCAAGCCCGAGACCGTCGAGATCTATACCGACGGCGCCTGTTCCGGCAATCCCGGCCCCGGCGGCTGG GGCGCCATCCTGCGCTTCAA
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MAVYTEVSDDELEDFAAEYDIGQVVSCKGIAEGVENTNYLLQTDQGNYILTLYEKRVNPEELPFFLGLMEHLAAHGLACP TPIHGRDGKALRTLCGRPAAIVSFLKGMWSRRITLGHCAELGPAMATMHLAGADFPLTRANNLSVAGWRPLFESIRPRAA EIKSDLAQSIEDELDYLEAHWPRTLPVGLIHADLFPDNVFFLADKAAGVDRMSGFIDFYFACTDVLAYDIAICLNAWCFE EDGAFNATKARLMLNGYRRVRPLSADELDALPLLARGAAMRFLLTRSYDWLHTPPGAMVKRKDPMEYYRKLRFHQGVTGP GQYGIE
Sequences:
>Translated_326_residues MAVYTEVSDDELEDFAAEYDIGQVVSCKGIAEGVENTNYLLQTDQGNYILTLYEKRVNPEELPFFLGLMEHLAAHGLACP TPIHGRDGKALRTLCGRPAAIVSFLKGMWSRRITLGHCAELGPAMATMHLAGADFPLTRANNLSVAGWRPLFESIRPRAA EIKSDLAQSIEDELDYLEAHWPRTLPVGLIHADLFPDNVFFLADKAAGVDRMSGFIDFYFACTDVLAYDIAICLNAWCFE EDGAFNATKARLMLNGYRRVRPLSADELDALPLLARGAAMRFLLTRSYDWLHTPPGAMVKRKDPMEYYRKLRFHQGVTGP GQYGIE >Mature_325_residues AVYTEVSDDELEDFAAEYDIGQVVSCKGIAEGVENTNYLLQTDQGNYILTLYEKRVNPEELPFFLGLMEHLAAHGLACPT PIHGRDGKALRTLCGRPAAIVSFLKGMWSRRITLGHCAELGPAMATMHLAGADFPLTRANNLSVAGWRPLFESIRPRAAE IKSDLAQSIEDELDYLEAHWPRTLPVGLIHADLFPDNVFFLADKAAGVDRMSGFIDFYFACTDVLAYDIAICLNAWCFEE DGAFNATKARLMLNGYRRVRPLSADELDALPLLARGAAMRFLLTRSYDWLHTPPGAMVKRKDPMEYYRKLRFHQGVTGPG QYGIE
Specific function: Unknown
COG id: COG2334
COG function: function code R; Putative homoserine kinase type II (protein kinase fold)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudomonas-type thrB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KHSE_MAGSA (Q2W9A8)
Other databases:
- EMBL: AP007255 - RefSeq: YP_420126.1 - ProteinModelPortal: Q2W9A8 - SMR: Q2W9A8 - STRING: Q2W9A8 - GeneID: 3806330 - GenomeReviews: AP007255_GR - KEGG: mag:amb0763 - NMPDR: fig|342108.5.peg.717 - eggNOG: COG2334 - HOGENOM: HBG309377 - OMA: ADLFRDN - ProtClustDB: PRK05231 - BioCyc: MMAG342108:AMB0763-MONOMER - HAMAP: MF_00301 - InterPro: IPR002575 - InterPro: IPR005280 - InterPro: IPR011009 - TIGRFAMs: TIGR00938
Pfam domain/function: PF01636 APH; SSF56112 Kinase_like
EC number: =2.7.1.39
Molecular weight: Translated: 36399; Mature: 36268
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVYTEVSDDELEDFAAEYDIGQVVSCKGIAEGVENTNYLLQTDQGNYILTLYEKRVNPE CEEECCCCHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCHH ELPFFLGLMEHLAAHGLACPTPIHGRDGKALRTLCGRPAAIVSFLKGMWSRRITLGHCAE HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHH LGPAMATMHLAGADFPLTRANNLSVAGWRPLFESIRPRAAEIKSDLAQSIEDELDYLEAH HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC WPRTLPVGLIHADLFPDNVFFLADKAAGVDRMSGFIDFYFACTDVLAYDIAICLNAWCFE CCCCCCHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC EDGAFNATKARLMLNGYRRVRPLSADELDALPLLARGAAMRFLLTRSYDWLHTPPGAMVK CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RKDPMEYYRKLRFHQGVTGPGQYGIE CCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AVYTEVSDDELEDFAAEYDIGQVVSCKGIAEGVENTNYLLQTDQGNYILTLYEKRVNPE EEECCCCHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCHH ELPFFLGLMEHLAAHGLACPTPIHGRDGKALRTLCGRPAAIVSFLKGMWSRRITLGHCAE HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHH LGPAMATMHLAGADFPLTRANNLSVAGWRPLFESIRPRAAEIKSDLAQSIEDELDYLEAH HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC WPRTLPVGLIHADLFPDNVFFLADKAAGVDRMSGFIDFYFACTDVLAYDIAICLNAWCFE CCCCCCHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC EDGAFNATKARLMLNGYRRVRPLSADELDALPLLARGAAMRFLLTRSYDWLHTPPGAMVK CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RKDPMEYYRKLRFHQGVTGPGQYGIE CCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA