| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83309853
Identifier: 83309853
GI number: 83309853
Start: 813179
End: 814027
Strand: Reverse
Name: 83309853
Synonym: amb0754
Alternate gene names: NA
Gene position: 814027-813179 (Counterclockwise)
Preceding gene: 83309854
Following gene: 83309852
Centisome position: 16.39
GC content: 66.2
Gene sequence:
>849_bases TTGTGGCTGAATGCAACCATGGCTACTACATACGCCCCCGTTGCCAATCCCCTTGCCGCCAGACCGTCCGATCTGGCGAC GCATTTCATGGAATGCGGGGCGCTCAACACCAATCTCAGCCTGGCGCCGGGCGAGCGGCTGGTCATCACCGACGATCTGC TGAACGGCACCGTGGGCGATGTGGCGGCCCTGTCCATGGCCGCCATCGTGGCCCGCGATTCCCAGGTGGCGCTGGCCGCC ATGCTGCCGCTGTCGGTGGCCGCCTCCAAGGTCTCGGCCCGCCATCGGCCCAAATACGAGCAGCTGTTTCAGCTGATCGA GGAGACCGCCTTCGATTCCGGGGTGCGCGGCTCGGCCGAGGCCATGATCACCGCCGGCTTCCGCGAGGCCCGCATCCGCG AGCTGGCCGCCGAACTGGGCGGCAATGTGGGACCGGCGCGCACCCGCTACCGCGCCTTTCTCGACGTGATCAAGCTGCTG ATCGACAAGAAGATCTCCGAGCCGTCCTTCCTGGACGAGTTCCTGGACTTTACCCGCAGCGTGGCGGGCAAGCTGGATTT CGGCATCTACGCCCTGTGCGTCGACCGGCTGTTCACCAGCCCCAACATCCCGCTGATGGTCAAGGTCTCGCTGGTGCGCG AGGTGATGAAGTATCCGCCGCTGGTGCGCAAGGAATTGCTGACCAACCTGCTGTCCTCCAACGCCGCCCCCCTGGAGCTG GTCCAGTTCGCCCAGGGCGAGCTGTCGTGCGGCATGACCCGGGACCAGATCACCGAGATCGTCCTGTTCACCACCTTGAA GCGGGCCTGGGCCGCCCAGAAAAGCGTCCCCCGCCGCGCCACCGCCTGA
Upstream 100 bases:
>100_bases GGTTTCAACAATTCCACGCAGACCAGATCGGGCATCCTAGCACTTCGCGGCGCCCAGGAAAAGACGGTGAAGACCCGAGA CTCTTGCCCCCCGGCGGGTA
Downstream 100 bases:
>100_bases TATTTCCATGCCCTTTCCCGTCATCCTGAGCAACGCGAAGGATCTCCGCCCGAAGATACGGTGCCGGTTGGGACACGCCG TTCCAGACGGAGATCCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MWLNATMATTYAPVANPLAARPSDLATHFMECGALNTNLSLAPGERLVITDDLLNGTVGDVAALSMAAIVARDSQVALAA MLPLSVAASKVSARHRPKYEQLFQLIEETAFDSGVRGSAEAMITAGFREARIRELAAELGGNVGPARTRYRAFLDVIKLL IDKKISEPSFLDEFLDFTRSVAGKLDFGIYALCVDRLFTSPNIPLMVKVSLVREVMKYPPLVRKELLTNLLSSNAAPLEL VQFAQGELSCGMTRDQITEIVLFTTLKRAWAAQKSVPRRATA
Sequences:
>Translated_282_residues MWLNATMATTYAPVANPLAARPSDLATHFMECGALNTNLSLAPGERLVITDDLLNGTVGDVAALSMAAIVARDSQVALAA MLPLSVAASKVSARHRPKYEQLFQLIEETAFDSGVRGSAEAMITAGFREARIRELAAELGGNVGPARTRYRAFLDVIKLL IDKKISEPSFLDEFLDFTRSVAGKLDFGIYALCVDRLFTSPNIPLMVKVSLVREVMKYPPLVRKELLTNLLSSNAAPLEL VQFAQGELSCGMTRDQITEIVLFTTLKRAWAAQKSVPRRATA >Mature_282_residues MWLNATMATTYAPVANPLAARPSDLATHFMECGALNTNLSLAPGERLVITDDLLNGTVGDVAALSMAAIVARDSQVALAA MLPLSVAASKVSARHRPKYEQLFQLIEETAFDSGVRGSAEAMITAGFREARIRELAAELGGNVGPARTRYRAFLDVIKLL IDKKISEPSFLDEFLDFTRSVAGKLDFGIYALCVDRLFTSPNIPLMVKVSLVREVMKYPPLVRKELLTNLLSSNAAPLEL VQFAQGELSCGMTRDQITEIVLFTTLKRAWAAQKSVPRRATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30701; Mature: 30701
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLNATMATTYAPVANPLAARPSDLATHFMECGALNTNLSLAPGERLVITDDLLNGTVGD CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCEEEEEHHHHCCCHHH VAALSMAAIVARDSQVALAAMLPLSVAASKVSARHRPKYEQLFQLIEETAFDSGVRGSAE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCH AMITAGFREARIRELAAELGGNVGPARTRYRAFLDVIKLLIDKKISEPSFLDEFLDFTRS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VAGKLDFGIYALCVDRLFTSPNIPLMVKVSLVREVMKYPPLVRKELLTNLLSSNAAPLEL HHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH VQFAQGELSCGMTRDQITEIVLFTTLKRAWAAQKSVPRRATA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MWLNATMATTYAPVANPLAARPSDLATHFMECGALNTNLSLAPGERLVITDDLLNGTVGD CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCEEEEEHHHHCCCHHH VAALSMAAIVARDSQVALAAMLPLSVAASKVSARHRPKYEQLFQLIEETAFDSGVRGSAE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCH AMITAGFREARIRELAAELGGNVGPARTRYRAFLDVIKLLIDKKISEPSFLDEFLDFTRS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VAGKLDFGIYALCVDRLFTSPNIPLMVKVSLVREVMKYPPLVRKELLTNLLSSNAAPLEL HHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH VQFAQGELSCGMTRDQITEIVLFTTLKRAWAAQKSVPRRATA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA