| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309845
Identifier: 83309845
GI number: 83309845
Start: 807090
End: 807620
Strand: Reverse
Name: 83309845
Synonym: amb0746
Alternate gene names: NA
Gene position: 807620-807090 (Counterclockwise)
Preceding gene: 83309848
Following gene: 83309844
Centisome position: 16.26
GC content: 65.16
Gene sequence:
>531_bases ATGTCCGGAGGGTTTTATAGCCTTGCCGGGCCTGGGCAACAACCGTGCTTTCCCTCCGACCCGAGGCGGGACTATCCTTG GAGAGTCATGAAGGAAAGACGACGGCCCGAACGCGGCCGCCCCAACGTCATCGAGATCGTGGTGCGCGTGCCGGCCGACA AGGCCGACGCGGTCAAGGCCTATGCCGGACGCATCTCGCGCCGCCGCAGCCCCGCCCTGCGCGAGGAGGTGATCGGCCGC CTGCAGTCGCGCGCCGACATCATGGAACGCTTCGGGGTGAAGAACCTGTACCTGTTCGGCTCGGTGGTGCGGGAAGAGGC CAAGCCCACCAGCGACATCGACCTGATGGTCGAGTTCTTTCCCGGCAAGCCCGGCGGCCTGTTCGCCTATGTGGAGCTGA AGCACGCCCTGGAAGGGCTTCTCGGCCGCCCGGTGGACCTCATCACCTCGGGCAACATCAAGCCGCGCCTGAAAAAGCGC ATCCTGGAAGAATGCCTGCTGGTTTACGGAGAGGGAGACGGGAGACGGTGA
Upstream 100 bases:
>100_bases GCTTTTGCCCTCCCACACCCAGGAGCCCTGGGAATCGCGGCCCTCGGCGCGGGCGTAGCCGGTCATGCTGGCGACGGTCA AGGCGGGAACCTCCTGCAAA
Downstream 100 bases:
>100_bases CCTTCAAGGATTGGCGGGTCCGCATCGAGGACATGATCGAGGCCATCGAGCGCATCCGGCGCTATACCGAGGGCATGGAC GACCGCCGTTTCGTCGCCGA
Product: nucleotidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSGGFYSLAGPGQQPCFPSDPRRDYPWRVMKERRRPERGRPNVIEIVVRVPADKADAVKAYAGRISRRRSPALREEVIGR LQSRADIMERFGVKNLYLFGSVVREEAKPTSDIDLMVEFFPGKPGGLFAYVELKHALEGLLGRPVDLITSGNIKPRLKKR ILEECLLVYGEGDGRR
Sequences:
>Translated_176_residues MSGGFYSLAGPGQQPCFPSDPRRDYPWRVMKERRRPERGRPNVIEIVVRVPADKADAVKAYAGRISRRRSPALREEVIGR LQSRADIMERFGVKNLYLFGSVVREEAKPTSDIDLMVEFFPGKPGGLFAYVELKHALEGLLGRPVDLITSGNIKPRLKKR ILEECLLVYGEGDGRR >Mature_175_residues SGGFYSLAGPGQQPCFPSDPRRDYPWRVMKERRRPERGRPNVIEIVVRVPADKADAVKAYAGRISRRRSPALREEVIGRL QSRADIMERFGVKNLYLFGSVVREEAKPTSDIDLMVEFFPGKPGGLFAYVELKHALEGLLGRPVDLITSGNIKPRLKKRI LEECLLVYGEGDGRR
Specific function: Unknown
COG id: COG1669
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002934 [H]
Pfam domain/function: PF01909 NTP_transf_2 [H]
EC number: NA
Molecular weight: Translated: 19897; Mature: 19766
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGFYSLAGPGQQPCFPSDPRRDYPWRVMKERRRPERGRPNVIEIVVRVPADKADAVKA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHH YAGRISRRRSPALREEVIGRLQSRADIMERFGVKNLYLFGSVVREEAKPTSDIDLMVEFF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEC PGKPGGLFAYVELKHALEGLLGRPVDLITSGNIKPRLKKRILEECLLVYGEGDGRR CCCCCCEEHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SGGFYSLAGPGQQPCFPSDPRRDYPWRVMKERRRPERGRPNVIEIVVRVPADKADAVKA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHH YAGRISRRRSPALREEVIGRLQSRADIMERFGVKNLYLFGSVVREEAKPTSDIDLMVEFF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEC PGKPGGLFAYVELKHALEGLLGRPVDLITSGNIKPRLKKRILEECLLVYGEGDGRR CCCCCCEEHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]