| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309844
Identifier: 83309844
GI number: 83309844
Start: 806719
End: 807093
Strand: Reverse
Name: 83309844
Synonym: amb0745
Alternate gene names: NA
Gene position: 807093-806719 (Counterclockwise)
Preceding gene: 83309845
Following gene: 83309843
Centisome position: 16.25
GC content: 65.07
Gene sequence:
>375_bases GTGACCTTCAAGGATTGGCGGGTCCGCATCGAGGACATGATCGAGGCCATCGAGCGCATCCGGCGCTATACCGAGGGCAT GGACGACCGCCGTTTCGTCGCCGACGACCGCACGGTGGACGCCGTGGTCCGCAATCTGGAAATCATCGGTGAGGCCGCCA AGCGCGTGCCCTTCAACGTGCTGGAACGCCATCCCGACATCCCGTGGAGCCGCATGTCCGAGATGCGCAACATTCTGGTG CACGAATACCATTCCGTCGACCCCTCCATCATCTTCGACACCGCCCGCCACGACCTGCCGCCCCTGCTGGGGCCGCTGCG CGCCCTGCTCAACGAGCGGAACGGCAATGGCAACGGGAACGGCAACGGCGGATGA
Upstream 100 bases:
>100_bases GCCCGGTGGACCTCATCACCTCGGGCAACATCAAGCCGCGCCTGAAAAAGCGCATCCTGGAAGAATGCCTGCTGGTTTAC GGAGAGGGAGACGGGAGACG
Downstream 100 bases:
>100_bases CAAAGCCGTTCAGCTCCGTCCTGATCACCGGCGCCTCGTCGGGCCTGGGAGCCGGGCTGGCGCGGATCTGCGCGGCGCCC GGCGTCACCTTGCACCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTFKDWRVRIEDMIEAIERIRRYTEGMDDRRFVADDRTVDAVVRNLEIIGEAAKRVPFNVLERHPDIPWSRMSEMRNILV HEYHSVDPSIIFDTARHDLPPLLGPLRALLNERNGNGNGNGNGG
Sequences:
>Translated_124_residues MTFKDWRVRIEDMIEAIERIRRYTEGMDDRRFVADDRTVDAVVRNLEIIGEAAKRVPFNVLERHPDIPWSRMSEMRNILV HEYHSVDPSIIFDTARHDLPPLLGPLRALLNERNGNGNGNGNGG >Mature_123_residues TFKDWRVRIEDMIEAIERIRRYTEGMDDRRFVADDRTVDAVVRNLEIIGEAAKRVPFNVLERHPDIPWSRMSEMRNILVH EYHSVDPSIIFDTARHDLPPLLGPLRALLNERNGNGNGNGNGG
Specific function: Unknown
COG id: COG2361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0331 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008201 [H]
Pfam domain/function: PF01934 DUF86 [H]
EC number: NA
Molecular weight: Translated: 14335; Mature: 14204
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKDWRVRIEDMIEAIERIRRYTEGMDDRRFVADDRTVDAVVRNLEIIGEAAKRVPFNV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHHH LERHPDIPWSRMSEMRNILVHEYHSVDPSIIFDTARHDLPPLLGPLRALLNERNGNGNGN HHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC GNGG CCCC >Mature Secondary Structure TFKDWRVRIEDMIEAIERIRRYTEGMDDRRFVADDRTVDAVVRNLEIIGEAAKRVPFNV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHHH LERHPDIPWSRMSEMRNILVHEYHSVDPSIIFDTARHDLPPLLGPLRALLNERNGNGNGN HHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC GNGG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]