Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83309822

Identifier: 83309822

GI number: 83309822

Start: 784331

End: 785158

Strand: Reverse

Name: 83309822

Synonym: amb0723

Alternate gene names: NA

Gene position: 785158-784331 (Counterclockwise)

Preceding gene: 83309823

Following gene: 83309821

Centisome position: 15.81

GC content: 63.65

Gene sequence:

>828_bases
ATGGCGATGCTTGAACTGACCGACGACCTGCGAATCGGCCATCCGGTGATCGATGCCGATCACCAGCGGCTGATCGAGAT
CATCAACGAGTTTCTCGAACACTCGAAAGCCGCGGACAATTCGCAGGTCCTGCACGAGACGCTGAAATCCCTGCTGGCTT
ATGGCCGGGACCACTTCAGCCGCGAGGAGCGCATTCAGCGCCAGTGCCTGTATCCCCTTCAACCGGGCCATTTCCACGAG
CACAAAGCCTTGCTGGATCAGGTGCGCGAGATCGCCCGGGCCTATTTCATCGCCAAGACCAAGCCCCTGAACGAGTCCTC
GGTGCTGGAGGTCAACGAGTTGCTCAAGGCCTGGCTGATCGGCCACGTCAAGAAATTCGACACCGGCATGCGCGACTGGG
TGGCGCCCCCCAAGGACCCGGACGCCGCCCCGGAAAAGCTGGCGTCCCACGATCTGGCCGCCCTGGTCATCGATTCCGAT
GCCGCCCGCCGGGGACGTCTGGCCGATCTGCTGACCGGCCTGGGAGCGGCCAGGGTGCTGCAGGCTGAGGACGGCATCAA
GGGGCTGGCCATGGCCTTCGGCGATCCGGTTCCCGACTTCATCATCTGCGACCTGGAAGCCGAGCCCCTGGACGGCTCCG
CTCTGGCCGGAGCGCTGCGCGGCAGCAACAAGGCCTACATCGCCCGCATTCCGCTGCTGCTGCTGAGCGATACCGACGAC
GCCGACCTCATCCAGAAAGTGATGGAGGCCGGCGCCACCGGCCTTTACCCCAAAGCCTTCAATCCCAAGAACCTTGGGCG
CCTGCTCAACCACCTGGTCAAAGGCTAA

Upstream 100 bases:

>100_bases
CGACAACTGGCTGACCATGCTGAAGATCGGCTACGCCTACTAGCTCTCTCCCCGGGGCATACGATAGATTCCAAGGGATC
CATCAGCGCTCCGGGGGGAC

Downstream 100 bases:

>100_bases
GGCAGCCCTTTGTCCAATGCATCGATTAAGTGTATGCATTTAAGTATATACCCGCTTGACCATTCTTTTGTTTCTCCGGA
AACAGCTATAGGGTAAACAG

Product: hemerythrin

Products: NA

Alternate protein names: Hemerythrin-Like Protein; Hemerythrin

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MAMLELTDDLRIGHPVIDADHQRLIEIINEFLEHSKAADNSQVLHETLKSLLAYGRDHFSREERIQRQCLYPLQPGHFHE
HKALLDQVREIARAYFIAKTKPLNESSVLEVNELLKAWLIGHVKKFDTGMRDWVAPPKDPDAAPEKLASHDLAALVIDSD
AARRGRLADLLTGLGAARVLQAEDGIKGLAMAFGDPVPDFIICDLEAEPLDGSALAGALRGSNKAYIARIPLLLLSDTDD
ADLIQKVMEAGATGLYPKAFNPKNLGRLLNHLVKG

Sequences:

>Translated_275_residues
MAMLELTDDLRIGHPVIDADHQRLIEIINEFLEHSKAADNSQVLHETLKSLLAYGRDHFSREERIQRQCLYPLQPGHFHE
HKALLDQVREIARAYFIAKTKPLNESSVLEVNELLKAWLIGHVKKFDTGMRDWVAPPKDPDAAPEKLASHDLAALVIDSD
AARRGRLADLLTGLGAARVLQAEDGIKGLAMAFGDPVPDFIICDLEAEPLDGSALAGALRGSNKAYIARIPLLLLSDTDD
ADLIQKVMEAGATGLYPKAFNPKNLGRLLNHLVKG
>Mature_274_residues
AMLELTDDLRIGHPVIDADHQRLIEIINEFLEHSKAADNSQVLHETLKSLLAYGRDHFSREERIQRQCLYPLQPGHFHEH
KALLDQVREIARAYFIAKTKPLNESSVLEVNELLKAWLIGHVKKFDTGMRDWVAPPKDPDAAPEKLASHDLAALVIDSDA
ARRGRLADLLTGLGAARVLQAEDGIKGLAMAFGDPVPDFIICDLEAEPLDGSALAGALRGSNKAYIARIPLLLLSDTDDA
DLIQKVMEAGATGLYPKAFNPKNLGRLLNHLVKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30308; Mature: 30177

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLELTDDLRIGHPVIDADHQRLIEIINEFLEHSKAADNSQVLHETLKSLLAYGRDHFS
CCCEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
REERIQRQCLYPLQPGHFHEHKALLDQVREIARAYFIAKTKPLNESSVLEVNELLKAWLI
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GHVKKFDTGMRDWVAPPKDPDAAPEKLASHDLAALVIDSDAARRGRLADLLTGLGAARVL
HHHHHHHCCHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCHHHHHH
QAEDGIKGLAMAFGDPVPDFIICDLEAEPLDGSALAGALRGSNKAYIARIPLLLLSDTDD
HHCCCHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECEEEECCCCC
ADLIQKVMEAGATGLYPKAFNPKNLGRLLNHLVKG
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
AMLELTDDLRIGHPVIDADHQRLIEIINEFLEHSKAADNSQVLHETLKSLLAYGRDHFS
CCEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
REERIQRQCLYPLQPGHFHEHKALLDQVREIARAYFIAKTKPLNESSVLEVNELLKAWLI
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GHVKKFDTGMRDWVAPPKDPDAAPEKLASHDLAALVIDSDAARRGRLADLLTGLGAARVL
HHHHHHHCCHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCHHHHHH
QAEDGIKGLAMAFGDPVPDFIICDLEAEPLDGSALAGALRGSNKAYIARIPLLLLSDTDD
HHCCCHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECEEEECCCCC
ADLIQKVMEAGATGLYPKAFNPKNLGRLLNHLVKG
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA