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The map label for this gene is insD1 [C]

Identifier: 83309747

GI number: 83309747

Start: 696756

End: 697355

Strand: Reverse

Name: insD1 [C]

Synonym: amb0648

Alternate gene names: 83309747

Gene position: 697355-696756 (Counterclockwise)

Preceding gene: 83309748

Following gene: 83309742

Centisome position: 14.04

GC content: 65.17

Gene sequence:

>600_bases
GTGACGCCCACGGCGTTGCGGGAAGTCGGATGCTGGCTGATGTCGGAAAAGGGCATCAGCCAGCGCCGCGCCTGCAACCT
CGTGGGCCTTCACCGTTCGGTGGCGCGGTATCGGCATCGCCACCGCGACGACGGCCCGGTCCGGGACAGGCTGAAGGACC
TGGCCGGCGGGCATCGTCGCTACGGCTATCTGCGCCTGCATGTTTTGCTTCGCCGGGAGGGGCTGGTGATCAATCACAAG
CGAACATACCGCCTCTACCGCGACGAGGAGCTGGCGGTGCGGACCAAGAAGCGCAAACGGCTGGCGGGCCGGGAGCGCGT
GCCACTGGCGGCGCCGGAGCGGCGCAATCAGCGTTGGTCGATGGACTTCGTTTCCGACAGCCTGTGCTCGGGCCGCCGCT
TCCGGGTCCTCAACATTGTCGACGAACACACAAGGGAAAGTCCCGGCCAGTTGGTCGACCTGTCGATCTCGGGTGAGCGG
GTAACCCGCCTGCTCGATCAGTTGGCCGCTTTGCATGGCCTCCCCGAGGAGATCGTCACGGACAATGGTCCGGAATTTAC
CAGCAAGGCCATTGACCTGTTCCCTGACCTGTTCCCCTGA

Upstream 100 bases:

>100_bases
GGCTGAAGGCGTTGGAAGACGAAAACACGCGGCTGAAGAAGCTGTTGGCGGACGCCATGCTGGACAATGTCCTGCTGAAG
GAAGTCCTCGGAAAAAAATG

Downstream 100 bases:

>100_bases
TTGATCCCAGTCAGAGGTAGAGCCCCGTCTCCCCGTGATGCCCGAAATGGGCGGTGATGGCAATGTGGGCCGGGGCATGC
CCCGGCCCACATTGCGCTCG

Product: transposase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTPTALREVGCWLMSEKGISQRRACNLVGLHRSVARYRHRHRDDGPVRDRLKDLAGGHRRYGYLRLHVLLRREGLVINHK
RTYRLYRDEELAVRTKKRKRLAGRERVPLAAPERRNQRWSMDFVSDSLCSGRRFRVLNIVDEHTRESPGQLVDLSISGER
VTRLLDQLAALHGLPEEIVTDNGPEFTSKAIDLFPDLFP

Sequences:

>Translated_199_residues
MTPTALREVGCWLMSEKGISQRRACNLVGLHRSVARYRHRHRDDGPVRDRLKDLAGGHRRYGYLRLHVLLRREGLVINHK
RTYRLYRDEELAVRTKKRKRLAGRERVPLAAPERRNQRWSMDFVSDSLCSGRRFRVLNIVDEHTRESPGQLVDLSISGER
VTRLLDQLAALHGLPEEIVTDNGPEFTSKAIDLFPDLFP
>Mature_198_residues
TPTALREVGCWLMSEKGISQRRACNLVGLHRSVARYRHRHRDDGPVRDRLKDLAGGHRRYGYLRLHVLLRREGLVINHKR
TYRLYRDEELAVRTKKRKRLAGRERVPLAAPERRNQRWSMDFVSDSLCSGRRFRVLNIVDEHTRESPGQLVDLSISGERV
TRLLDQLAALHGLPEEIVTDNGPEFTSKAIDLFPDLFP

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 23126; Mature: 22995

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTALREVGCWLMSEKGISQRRACNLVGLHRSVARYRHRHRDDGPVRDRLKDLAGGHRR
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHH
YGYLRLHVLLRREGLVINHKRTYRLYRDEELAVRTKKRKRLAGRERVPLAAPERRNQRWS
HHHHHHEEEHHHCCEEEECHHEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
MDFVSDSLCSGRRFRVLNIVDEHTRESPGQLVDLSISGERVTRLLDQLAALHGLPEEIVT
HHHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHC
DNGPEFTSKAIDLFPDLFP
CCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TPTALREVGCWLMSEKGISQRRACNLVGLHRSVARYRHRHRDDGPVRDRLKDLAGGHRR
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHH
YGYLRLHVLLRREGLVINHKRTYRLYRDEELAVRTKKRKRLAGRERVPLAAPERRNQRWS
HHHHHHEEEHHHCCEEEECHHEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
MDFVSDSLCSGRRFRVLNIVDEHTRESPGQLVDLSISGERVTRLLDQLAALHGLPEEIVT
HHHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHC
DNGPEFTSKAIDLFPDLFP
CCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]