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The map label for this gene is 83309720

Identifier: 83309720

GI number: 83309720

Start: 666407

End: 668098

Strand: Reverse

Name: 83309720

Synonym: amb0621

Alternate gene names: NA

Gene position: 668098-666407 (Counterclockwise)

Preceding gene: 83309723

Following gene: 83309712

Centisome position: 13.45

GC content: 71.69

Gene sequence:

>1692_bases
ATGCGTCTCGCTCTGTCCGCCATGGTGGCATCCGCCGCGATGCTGCTGTTCATCCCCCAGATCAGCCGGGGGGCCACGCC
GCCGGCCGGCACGGCCCCCGACATCCCGGGCCGCGCCCATGTCCTACCCGTGCGCGGCGGCCGCGATGGCGGGCCGGGCG
GCGGGCACGATTTCGGCCGCGGAGGCTTCGGCGGGCGGGACTTCGCCGGGCGAGACTTCGAGGGCGAGCGGCGGGACGGC
TTCCGCCCCCCTCCACCGCCGCCGCCCCTACCGCCCTTGCGGGGAGAACGGCTGGCACCGCCGCCACCGCCCTATCTCCC
GCCGGCCGGCGCCTATCGCGACCGCGTCGACGACGAATCCGACGACCCCACCAAATTCATCCCGCCGCCCTGGCTGAAGG
AATGGATCGCCACCGCCCGCCAGAGGGGCTACAGCGATGCCGAGCTGGCCGCCATCCTGGAGCGCCACCCCCGCATCGAG
CGCTTCGTCACCCGATCGCGCCGTCAGGGCCTCAGCGATCAAGCCATCTTCGCCACCCTGGGGCTGGACCTTCGCGGCAC
CAGGCCCACCCTGGCCTCCATCGCACCGCCGCCGCCCCTGCCCGGCCCCAAGCCCACCGCGCCGCAGCCCCCCGTCCCCA
GCGCCGTCCGCCTGGAGGTGCCCGATAGCCTGCAGACCACCGATCTGGAGGTGGAACTGGCCGGCAAGGTGACCGGCACC
ACCAAGGGCTCCACCGTGTTCGTGGACGGCGCCCAGGTGAAGCTCGGCAAGGACGGCTCGTTCCGCTATCGCCGGGGCGT
GCCCCTGGGTGAGACCGAGATCAAGGTGGAAGCCCGCGACCGCCAGGGACGCGCCACCGAAGCCATGGTCACCGTCACCC
GCGATCCCCCGCCCGCCGGCGCCTCCGCCTACGAGCCGCTCAATCCCGGCCGCGCCAAGGGCAAGCGCAACCCCAAGGCC
GTGGCGCTGGTCATCGGCGTCGACCGCTACGAATCCGCCCCCCGCGCCGAATTCGCCGAGAACGACGCCAACGCCTTCTA
CGACTACGCCACCCGGGCCATGGGCGTGCCCCATGACCGGGTCAAGCTGCTGACCGGGGACAAGGCCCGCCGCCTGTCCG
TGGAGAAGGCCGTGCTGGCCTGGGTCCAGCCCCTGATCGCCCAAGGCAAGTCGGACGTCTACCTGTTCTTCTCCGGCCAT
GGCCTCGCCTCCGACGACGGACGCGACCAGTACCTGCTGCCCTATGACGGCGACCGCATGCTGCTGGCCCAAAGCGCGCT
GAAGCGCAAGGACATCATCGACGCCCTGGTCGCCGCCGGCGCCCGCACCGTCACCCTGTTCCTCGACACCTGCTATTCCG
GCGGCACCCGCGGCAACGACACCCTGGTCCAGGCCGCCCGCCCCATCCTCATCTCGGTCAAGGAAAGCGACCTGCCCCCC
AACGTCACCATCCTGGCCGCCGCCGGCCGCGACCAGCTGTCCAGCAGCCTCGCCGCCACCCGCCACGGCCTGTTCAGCTA
CTACCTGATGAAAGGCCTGGAAGGCAACGCCGCCAACGGCGGCCGCGCCATCACCATCGGCGCCCTGGAAAGCTACCTGC
TGCAGCAGGTCCCCGCCGAAGCCGCCAAACTGGGCCGCAGCCAATACCCCGAACTGATCGGGGATGAAAGCCGGGTGCTG
TCGGAGTGGTAG

Upstream 100 bases:

>100_bases
TCCATTTCAGTTCCACACCATCCGCGTGAGCGGCTCCACATTTAAGTAAGGAAAAGGGGCGTAGACTGAACGGCGTTCGT
GTCCAGAAGGGGCCGGAAAC

Downstream 100 bases:

>100_bases
TCGGAAGGGGAGGAAGGGTGCGAAGGGACTCGTCCCTTCGCGCATCCTTGGTCGTTATTTCATCTTCAGTGGCAGCAAAA
TTCAGATTGTCCTCAATTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MRLALSAMVASAAMLLFIPQISRGATPPAGTAPDIPGRAHVLPVRGGRDGGPGGGHDFGRGGFGGRDFAGRDFEGERRDG
FRPPPPPPPLPPLRGERLAPPPPPYLPPAGAYRDRVDDESDDPTKFIPPPWLKEWIATARQRGYSDAELAAILERHPRIE
RFVTRSRRQGLSDQAIFATLGLDLRGTRPTLASIAPPPPLPGPKPTAPQPPVPSAVRLEVPDSLQTTDLEVELAGKVTGT
TKGSTVFVDGAQVKLGKDGSFRYRRGVPLGETEIKVEARDRQGRATEAMVTVTRDPPPAGASAYEPLNPGRAKGKRNPKA
VALVIGVDRYESAPRAEFAENDANAFYDYATRAMGVPHDRVKLLTGDKARRLSVEKAVLAWVQPLIAQGKSDVYLFFSGH
GLASDDGRDQYLLPYDGDRMLLAQSALKRKDIIDALVAAGARTVTLFLDTCYSGGTRGNDTLVQAARPILISVKESDLPP
NVTILAAAGRDQLSSSLAATRHGLFSYYLMKGLEGNAANGGRAITIGALESYLLQQVPAEAAKLGRSQYPELIGDESRVL
SEW

Sequences:

>Translated_563_residues
MRLALSAMVASAAMLLFIPQISRGATPPAGTAPDIPGRAHVLPVRGGRDGGPGGGHDFGRGGFGGRDFAGRDFEGERRDG
FRPPPPPPPLPPLRGERLAPPPPPYLPPAGAYRDRVDDESDDPTKFIPPPWLKEWIATARQRGYSDAELAAILERHPRIE
RFVTRSRRQGLSDQAIFATLGLDLRGTRPTLASIAPPPPLPGPKPTAPQPPVPSAVRLEVPDSLQTTDLEVELAGKVTGT
TKGSTVFVDGAQVKLGKDGSFRYRRGVPLGETEIKVEARDRQGRATEAMVTVTRDPPPAGASAYEPLNPGRAKGKRNPKA
VALVIGVDRYESAPRAEFAENDANAFYDYATRAMGVPHDRVKLLTGDKARRLSVEKAVLAWVQPLIAQGKSDVYLFFSGH
GLASDDGRDQYLLPYDGDRMLLAQSALKRKDIIDALVAAGARTVTLFLDTCYSGGTRGNDTLVQAARPILISVKESDLPP
NVTILAAAGRDQLSSSLAATRHGLFSYYLMKGLEGNAANGGRAITIGALESYLLQQVPAEAAKLGRSQYPELIGDESRVL
SEW
>Mature_563_residues
MRLALSAMVASAAMLLFIPQISRGATPPAGTAPDIPGRAHVLPVRGGRDGGPGGGHDFGRGGFGGRDFAGRDFEGERRDG
FRPPPPPPPLPPLRGERLAPPPPPYLPPAGAYRDRVDDESDDPTKFIPPPWLKEWIATARQRGYSDAELAAILERHPRIE
RFVTRSRRQGLSDQAIFATLGLDLRGTRPTLASIAPPPPLPGPKPTAPQPPVPSAVRLEVPDSLQTTDLEVELAGKVTGT
TKGSTVFVDGAQVKLGKDGSFRYRRGVPLGETEIKVEARDRQGRATEAMVTVTRDPPPAGASAYEPLNPGRAKGKRNPKA
VALVIGVDRYESAPRAEFAENDANAFYDYATRAMGVPHDRVKLLTGDKARRLSVEKAVLAWVQPLIAQGKSDVYLFFSGH
GLASDDGRDQYLLPYDGDRMLLAQSALKRKDIIDALVAAGARTVTLFLDTCYSGGTRGNDTLVQAARPILISVKESDLPP
NVTILAAAGRDQLSSSLAATRHGLFSYYLMKGLEGNAANGGRAITIGALESYLLQQVPAEAAKLGRSQYPELIGDESRVL
SEW

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 13 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020472
- InterPro:   IPR011600
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00656 Peptidase_C14; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 60379; Mature: 60379

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLALSAMVASAAMLLFIPQISRGATPPAGTAPDIPGRAHVLPVRGGRDGGPGGGHDFGR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
GGFGGRDFAGRDFEGERRDGFRPPPPPPPLPPLRGERLAPPPPPYLPPAGAYRDRVDDES
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
DDPTKFIPPPWLKEWIATARQRGYSDAELAAILERHPRIERFVTRSRRQGLSDQAIFATL
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEE
GLDLRGTRPTLASIAPPPPLPGPKPTAPQPPVPSAVRLEVPDSLQTTDLEVELAGKVTGT
CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECEEECC
TKGSTVFVDGAQVKLGKDGSFRYRRGVPLGETEIKVEARDRQGRATEAMVTVTRDPPPAG
CCCCEEEEECCEEEECCCCCCEEECCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCC
ASAYEPLNPGRAKGKRNPKAVALVIGVDRYESAPRAEFAENDANAFYDYATRAMGVPHDR
CCCCCCCCCCCCCCCCCCCEEEEEEECHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCHHH
VKLLTGDKARRLSVEKAVLAWVQPLIAQGKSDVYLFFSGHGLASDDGRDQYLLPYDGDRM
EEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCH
LLAQSALKRKDIIDALVAAGARTVTLFLDTCYSGGTRGNDTLVQAARPILISVKESDLPP
HHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCCHHHHHCCCCEEEEEECCCCCC
NVTILAAAGRDQLSSSLAATRHGLFSYYLMKGLEGNAANGGRAITIGALESYLLQQVPAE
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCHH
AAKLGRSQYPELIGDESRVLSEW
HHHCCHHHCHHHHCCCHHHHCCC
>Mature Secondary Structure
MRLALSAMVASAAMLLFIPQISRGATPPAGTAPDIPGRAHVLPVRGGRDGGPGGGHDFGR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
GGFGGRDFAGRDFEGERRDGFRPPPPPPPLPPLRGERLAPPPPPYLPPAGAYRDRVDDES
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
DDPTKFIPPPWLKEWIATARQRGYSDAELAAILERHPRIERFVTRSRRQGLSDQAIFATL
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEE
GLDLRGTRPTLASIAPPPPLPGPKPTAPQPPVPSAVRLEVPDSLQTTDLEVELAGKVTGT
CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECEEECC
TKGSTVFVDGAQVKLGKDGSFRYRRGVPLGETEIKVEARDRQGRATEAMVTVTRDPPPAG
CCCCEEEEECCEEEECCCCCCEEECCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCC
ASAYEPLNPGRAKGKRNPKAVALVIGVDRYESAPRAEFAENDANAFYDYATRAMGVPHDR
CCCCCCCCCCCCCCCCCCCEEEEEEECHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCHHH
VKLLTGDKARRLSVEKAVLAWVQPLIAQGKSDVYLFFSGHGLASDDGRDQYLLPYDGDRM
EEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCH
LLAQSALKRKDIIDALVAAGARTVTLFLDTCYSGGTRGNDTLVQAARPILISVKESDLPP
HHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCCHHHHHCCCCEEEEEECCCCCC
NVTILAAAGRDQLSSSLAATRHGLFSYYLMKGLEGNAANGGRAITIGALESYLLQQVPAE
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCHH
AAKLGRSQYPELIGDESRVLSEW
HHHCCHHHCHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]