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The map label for this gene is fliP

Identifier: 83309709

GI number: 83309709

Start: 657656

End: 658408

Strand: Reverse

Name: fliP

Synonym: amb0610

Alternate gene names: 83309709

Gene position: 658408-657656 (Counterclockwise)

Preceding gene: 83309710

Following gene: 83309708

Centisome position: 13.26

GC content: 63.08

Gene sequence:

>753_bases
ATGACCCGCCTTGCTTCCCGCCGCCGGATGATCCTGGCCGCCGCCGTTGGCATCCTGACCGCCCTGGCGGCCGGACCGGT
TCTGGCCCAGTCCCTGAACATCGATCTGGGCGGACCGCAGGCCAGCGCCACGTCGCGCATCATTCAGCTGATCGCGCTGA
CCACCGTGCTGTCGGTGGCGCCCTCCATCCTGGTGATGGTCACATCGTTCACCCGCTTCGTGGTGGTGCTGGGCTTCCTG
CGTCAGGCTCTGGGCACCCAGCAGAGCCCGCCCAATACGGTGATGGTCAGCCTGGCCATGTTTCTGACCGCCTTCGTGAT
GGCTCCCACCTTCGAGAAGGCCTGGACCGACGGCATCGCACCGGTGATGGACGGCCATCTGGACGAGATCGAGGGCTTCG
AGCGCGCCGTCAAGCCGTTCCACGCCTTCATGAGCAAGCATGTGCGCGGCCAGGATCTCAAGCTGTTCATGGATCTGTCG
CGCGCCAAGGAGGTGGAGAAGGCCGAGGACGCCCCCCTGCGGGCCTTGATCCCCGCCTTCATGATCAGCGAGCTGCGCCG
CGCCTTCGAAATCGGCTTTCTGATCTTCCTGCCGTTCCTGATCATCGACATGGTCATCGCCTCGGTGCTGATGAGCATGG
GCATGATGATGATTCCGCCCGCCATGATCTCCCTGCCGTTCAAGCTGATCTTCTTCGTTATGGTAGATGGCTGGTATCTG
GTCGTAGGCTCCCTGGTGCAGAGTTACGGGTAA

Upstream 100 bases:

>100_bases
CCCAGCCTGCGGTGGTGGAGACCGATTGCCCGCGCGCCGCCTTCACCCTGTCCGGCCCGGAAGCCGACTGGTCGGACCCA
ACCGAGCCGGAGACCGGAAC

Downstream 100 bases:

>100_bases
GAACCTACTACCGAATCGAGAAGTGACGACACATTTCAAGTTGGTTTAAATTGAGTTAACAGCCAACGCGAAATGTATTG
CCATTCCTTTGTCATACTTC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTRLASRRRMILAAAVGILTALAAGPVLAQSLNIDLGGPQASATSRIIQLIALTTVLSVAPSILVMVTSFTRFVVVLGFL
RQALGTQQSPPNTVMVSLAMFLTAFVMAPTFEKAWTDGIAPVMDGHLDEIEGFERAVKPFHAFMSKHVRGQDLKLFMDLS
RAKEVEKAEDAPLRALIPAFMISELRRAFEIGFLIFLPFLIIDMVIASVLMSMGMMMIPPAMISLPFKLIFFVMVDGWYL
VVGSLVQSYG

Sequences:

>Translated_250_residues
MTRLASRRRMILAAAVGILTALAAGPVLAQSLNIDLGGPQASATSRIIQLIALTTVLSVAPSILVMVTSFTRFVVVLGFL
RQALGTQQSPPNTVMVSLAMFLTAFVMAPTFEKAWTDGIAPVMDGHLDEIEGFERAVKPFHAFMSKHVRGQDLKLFMDLS
RAKEVEKAEDAPLRALIPAFMISELRRAFEIGFLIFLPFLIIDMVIASVLMSMGMMMIPPAMISLPFKLIFFVMVDGWYL
VVGSLVQSYG
>Mature_249_residues
TRLASRRRMILAAAVGILTALAAGPVLAQSLNIDLGGPQASATSRIIQLIALTTVLSVAPSILVMVTSFTRFVVVLGFLR
QALGTQQSPPNTVMVSLAMFLTAFVMAPTFEKAWTDGIAPVMDGHLDEIEGFERAVKPFHAFMSKHVRGQDLKLFMDLSR
AKEVEKAEDAPLRALIPAFMISELRRAFEIGFLIFLPFLIIDMVIASVLMSMGMMMIPPAMISLPFKLIFFVMVDGWYLV
VGSLVQSYG

Specific function: May be a component of the flagellum. It is required for normal cell division. May be implicated in the secretion of virulence factors [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=213, Percent_Identity=49.2957746478873, Blast_Score=213, Evalue=1e-56,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27355; Mature: 27224

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCC
>Mature Secondary Structure 
TRLASRRRMILAAAVGILTALAAGPVLAQSLNIDLGGPQASATSRIIQLIALTTVLSVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
PSILVMVTSFTRFVVVLGFLRQALGTQQSPPNTVMVSLAMFLTAFVMAPTFEKAWTDGIA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCH
PVMDGHLDEIEGFERAVKPFHAFMSKHVRGQDLKLFMDLSRAKEVEKAEDAPLRALIPAF
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
MISELRRAFEIGFLIFLPFLIIDMVIASVLMSMGMMMIPPAMISLPFKLIFFVMVDGWYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHH
VVGSLVQSYG
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7601828; 11259647 [H]