Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83309693

Identifier: 83309693

GI number: 83309693

Start: 640849

End: 641922

Strand: Reverse

Name: 83309693

Synonym: amb0594

Alternate gene names: NA

Gene position: 641922-640849 (Counterclockwise)

Preceding gene: 83309694

Following gene: 83309692

Centisome position: 12.92

GC content: 71.23

Gene sequence:

>1074_bases
ATGACCCTGGCCGACATCCTCGCCGACCGCATCCGCGCCACCGGTCCCATTCCGGTGTCCGAGTTCATGGCCGAGGCCTT
GGGCCATCCGGAATACGGCTATTACATGGGCCGCGACCCGTTCGGCATGGCGGGCGACTTCATCACGGCGCCGGAAATCA
GCCAGATGTTCGGCGAGCTGATCGGCCTGTGGTGCGCCCTGGTCTGGCAGAGCATGGGCGCACCCAAACGGGTGGTGCTG
GCCGAGATCGGGCCGGGACGCGGCACCCTGATGGCCGATCTGCTGCGTGCCGCGCAGGCCCTGCCTCCCTTCGCCCTGGC
CCTGAACGTCCACCTGATCGAGACCAGCCCATCCTTGCGCAATCGTCAGGCCCAGGCCCTGACCGACCGTTCGGTCGAGT
GGCACGAGCGGTTCGAGGATCTGCCCGACGGCCCGCTGCTGCTGGTGGCCAACGAGCTGTTCGACGCCCTGCCCATTCGC
CAGTTGGAAAAGGCCGGAGGCGTCTGGCGTGAACGGGTGGTGGCGCTGGACGAGGCCGGCGCCTTCGCCTTCGCCCAGGG
CCCTGTCGTGGCCGAGCCGCCCCTGGCCCCCGCCGTGCTGGGCGCGGCCGACGGCGCCGTGGCGGAACTCTGTCCCCAGG
GCCGCGCCCTGGCCGGGACCATCGCCCGGCGGCTGGCCCATCAGGGCGGAGCCGCTCTGATCATCGATTACGGCTATGGC
AAGAGCGCCGCCGGCGACTCGCTCCAGGCGCTGAAGAGCCACAAGCGCCACCCGGTGCTGTCCGGGCCGGGGACCGCCGA
CATCACCGCCCATGTGGACTTCCAGGCCCTGGCCGAGGCGGCCTCCGGGCTGGCCCGCGCCCATGGGCCGGTGCCCCAGG
GCAGCTTCCTCGCCCGCCTGGGCCTGGAGGAACGGGTCCGCATGCTGATGCAGAACGCCACGCCCGAGCAGGCCGCCCAT
CTGGCCAGCGGCGCACGGCGCTTGATCGATCCCGGGGAAATGGGCACCCTGTTCAAGGTCCTGGCGCTCGCCGCCCCTCT
GCTGCCCGTCCCCCCCGGCCTGGAACACGATTAA

Upstream 100 bases:

>100_bases
GCGTTGAGCGCCCCGAAGCGACGACGGAGCGCAGCGGAGAAGGGAAGCGGAGGAGCCAAGCGCACGGAGGCGCGCGCCCG
GCGCTTGAGGGGCTGAAACA

Downstream 100 bases:

>100_bases
ATGATCACCTTGTCGGCCCTCAACGAGTTTGTTCGCATCCGCCACGGTTTCTTCACTCGCGAAGGCGGCGTGTCGGAAGG
CCTTTACGCCTCGCTCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MTLADILADRIRATGPIPVSEFMAEALGHPEYGYYMGRDPFGMAGDFITAPEISQMFGELIGLWCALVWQSMGAPKRVVL
AEIGPGRGTLMADLLRAAQALPPFALALNVHLIETSPSLRNRQAQALTDRSVEWHERFEDLPDGPLLLVANELFDALPIR
QLEKAGGVWRERVVALDEAGAFAFAQGPVVAEPPLAPAVLGAADGAVAELCPQGRALAGTIARRLAHQGGAALIIDYGYG
KSAAGDSLQALKSHKRHPVLSGPGTADITAHVDFQALAEAASGLARAHGPVPQGSFLARLGLEERVRMLMQNATPEQAAH
LASGARRLIDPGEMGTLFKVLALAAPLLPVPPGLEHD

Sequences:

>Translated_357_residues
MTLADILADRIRATGPIPVSEFMAEALGHPEYGYYMGRDPFGMAGDFITAPEISQMFGELIGLWCALVWQSMGAPKRVVL
AEIGPGRGTLMADLLRAAQALPPFALALNVHLIETSPSLRNRQAQALTDRSVEWHERFEDLPDGPLLLVANELFDALPIR
QLEKAGGVWRERVVALDEAGAFAFAQGPVVAEPPLAPAVLGAADGAVAELCPQGRALAGTIARRLAHQGGAALIIDYGYG
KSAAGDSLQALKSHKRHPVLSGPGTADITAHVDFQALAEAASGLARAHGPVPQGSFLARLGLEERVRMLMQNATPEQAAH
LASGARRLIDPGEMGTLFKVLALAAPLLPVPPGLEHD
>Mature_356_residues
TLADILADRIRATGPIPVSEFMAEALGHPEYGYYMGRDPFGMAGDFITAPEISQMFGELIGLWCALVWQSMGAPKRVVLA
EIGPGRGTLMADLLRAAQALPPFALALNVHLIETSPSLRNRQAQALTDRSVEWHERFEDLPDGPLLLVANELFDALPIRQ
LEKAGGVWRERVVALDEAGAFAFAQGPVVAEPPLAPAVLGAADGAVAELCPQGRALAGTIARRLAHQGGAALIIDYGYGK
SAAGDSLQALKSHKRHPVLSGPGTADITAHVDFQALAEAASGLARAHGPVPQGSFLARLGLEERVRMLMQNATPEQAAHL
ASGARRLIDPGEMGTLFKVLALAAPLLPVPPGLEHD

Specific function: Unknown

COG id: COG1565

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21396487, Length=364, Percent_Identity=35.4395604395604, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI145701028, Length=340, Percent_Identity=28.5294117647059, Blast_Score=128, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI193211224, Length=369, Percent_Identity=34.9593495934959, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24645885, Length=372, Percent_Identity=38.9784946236559, Blast_Score=243, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37740; Mature: 37609

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLADILADRIRATGPIPVSEFMAEALGHPEYGYYMGRDPFGMAGDFITAPEISQMFGEL
CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
IGLWCALVWQSMGAPKRVVLAEIGPGRGTLMADLLRAAQALPPFALALNVHLIETSPSLR
HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHH
NRQAQALTDRSVEWHERFEDLPDGPLLLVANELFDALPIRQLEKAGGVWRERVVALDEAG
HHHHHHHHHCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
AFAFAQGPVVAEPPLAPAVLGAADGAVAELCPQGRALAGTIARRLAHQGGAALIIDYGYG
CEEEECCCCCCCCCCCHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
KSAAGDSLQALKSHKRHPVLSGPGTADITAHVDFQALAEAASGLARAHGPVPQGSFLARL
CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHC
GLEERVRMLMQNATPEQAAHLASGARRLIDPGEMGTLFKVLALAAPLLPVPPGLEHD
CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TLADILADRIRATGPIPVSEFMAEALGHPEYGYYMGRDPFGMAGDFITAPEISQMFGEL
CHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
IGLWCALVWQSMGAPKRVVLAEIGPGRGTLMADLLRAAQALPPFALALNVHLIETSPSLR
HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHH
NRQAQALTDRSVEWHERFEDLPDGPLLLVANELFDALPIRQLEKAGGVWRERVVALDEAG
HHHHHHHHHCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
AFAFAQGPVVAEPPLAPAVLGAADGAVAELCPQGRALAGTIARRLAHQGGAALIIDYGYG
CEEEECCCCCCCCCCCHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
KSAAGDSLQALKSHKRHPVLSGPGTADITAHVDFQALAEAASGLARAHGPVPQGSFLARL
CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHC
GLEERVRMLMQNATPEQAAHLASGARRLIDPGEMGTLFKVLALAAPLLPVPPGLEHD
CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA