| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309667
Identifier: 83309667
GI number: 83309667
Start: 616276
End: 617484
Strand: Reverse
Name: 83309667
Synonym: amb0568
Alternate gene names: NA
Gene position: 617484-616276 (Counterclockwise)
Preceding gene: 83309668
Following gene: 83309666
Centisome position: 12.43
GC content: 65.67
Gene sequence:
>1209_bases ATGTTCCTCAACCTGTTCCTCGAACTGCGCGACGCCAAGGTGCCGGTCACCTTGAAGGAATACCTCACCCTGCTGGAGGC CCTGGCCGAAGGCGTGGCCGAGATGAGCGTCGACACCTTCTACTATCTCTCGCGCTCATGCCTGGTAAAGGACGAGCGCA ACCTGGACAAGTTCGACCGGGTGTTCGCCCGCGTGTTCAACGGCGTGGTGGGGGAAGGCGACGAACTGGCCGCCGCGCTG AAGGCCGCCATTCCTGAGGAATGGCTGCGCAAGCTGGCGGAAAAGCATCTGACGCCCGAGGAGATGGAGCAGATCCAGTC GGCGGGCGGCTTCGAGAAGCTGATGGAAACCCTGAAGAAGCGGCTGGAGGAGCAGAAGGAGCGCCACCAGGGCGGCTCCA AATGGATCGGCACCGCCGGCACCTCGCCCTTCGGCGCCTATGGCTATAATCCCGAGGGTGTGCGCATCGGCCAGCACGAA TCCCGGCATCGCCGCGCCGTCAAGGTCTGGGACGAGCGGGCCTATCGCAATCTCGACGACGGCATCGAGCTGGGCACCCG CAACTTCCGCATGGCGCTGCGCCGCCTGCGCCGCTTCGCCCGCGAGGGCGCCGCCACCGAGCTGGACCTGGCCGGGACCA TCACCTCGACGGCGCGGGCGGGCGGCTGGCTCGACCTGCAGATGCGGCCCGAACGCCACAACAAGGTCAAGGTGCTGCTG CTGCTCGACATCGGCGGCTCCATGGACGAGCACGTGCGCACCTGCGAGGAGCTGTTCTCGGCGGTACGCTCGGAGTTCAA GCATCTGGAGCACTTCTACTTCCACAACTGCCCCTATTCCGGCCTGTGGAAGGACAATCACCGCCGCCACCAGGACGTCA CCCACACCCTGGACGTCATCCATACCTTTCCGTCGGACTACAAGCTGATCTTCGTCGGCGACGCCGCCATGAGCCCCTAC GAGATCACCATGCCGGGCGGCGCGGTGGAGGAGTGGAACGAGGAGCCGGGTCACGTCTGGATGCGCCGCCTGCTCGACCA ATGGCCCAGCGCCGTCTGGCTCAACCCGGCGCCCCAGGCCCGCTGGCAATGGACCCACTCCACCCAGATGATCCAGCAAT TGATGGACGGGCGCATGTTCCCCATGACCCTGGAAGGCCTCGACGGGGCCATGCGCGACCTGAATCGGAACGGCCCCCGC ACCAAATGA
Upstream 100 bases:
>100_bases GGCTGAAGGACTTCCTGTGGTCCTGGCTGAAGGGGCACATCCTGATCGAGGACCAGCGCTACGCCGCCTGGACCCGAGCG CGGGGCGGCTGAGACCCGCC
Downstream 100 bases:
>100_bases CTGTCACACGCTAGTGACGGATAGCCGATATTGGATTGCCGCCACCCTGTGATAGGGTATGGGCCGCTTTGGGGAGGGAA ACAGGACCGAATGGCGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; VWA Containing CoxE-Like Family Protein; Von Willebrand Factor Type A(VWA) Domain Protein
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MFLNLFLELRDAKVPVTLKEYLTLLEALAEGVAEMSVDTFYYLSRSCLVKDERNLDKFDRVFARVFNGVVGEGDELAAAL KAAIPEEWLRKLAEKHLTPEEMEQIQSAGGFEKLMETLKKRLEEQKERHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQHE SRHRRAVKVWDERAYRNLDDGIELGTRNFRMALRRLRRFAREGAATELDLAGTITSTARAGGWLDLQMRPERHNKVKVLL LLDIGGSMDEHVRTCEELFSAVRSEFKHLEHFYFHNCPYSGLWKDNHRRHQDVTHTLDVIHTFPSDYKLIFVGDAAMSPY EITMPGGAVEEWNEEPGHVWMRRLLDQWPSAVWLNPAPQARWQWTHSTQMIQQLMDGRMFPMTLEGLDGAMRDLNRNGPR TK
Sequences:
>Translated_402_residues MFLNLFLELRDAKVPVTLKEYLTLLEALAEGVAEMSVDTFYYLSRSCLVKDERNLDKFDRVFARVFNGVVGEGDELAAAL KAAIPEEWLRKLAEKHLTPEEMEQIQSAGGFEKLMETLKKRLEEQKERHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQHE SRHRRAVKVWDERAYRNLDDGIELGTRNFRMALRRLRRFAREGAATELDLAGTITSTARAGGWLDLQMRPERHNKVKVLL LLDIGGSMDEHVRTCEELFSAVRSEFKHLEHFYFHNCPYSGLWKDNHRRHQDVTHTLDVIHTFPSDYKLIFVGDAAMSPY EITMPGGAVEEWNEEPGHVWMRRLLDQWPSAVWLNPAPQARWQWTHSTQMIQQLMDGRMFPMTLEGLDGAMRDLNRNGPR TK >Mature_402_residues MFLNLFLELRDAKVPVTLKEYLTLLEALAEGVAEMSVDTFYYLSRSCLVKDERNLDKFDRVFARVFNGVVGEGDELAAAL KAAIPEEWLRKLAEKHLTPEEMEQIQSAGGFEKLMETLKKRLEEQKERHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQHE SRHRRAVKVWDERAYRNLDDGIELGTRNFRMALRRLRRFAREGAATELDLAGTITSTARAGGWLDLQMRPERHNKVKVLL LLDIGGSMDEHVRTCEELFSAVRSEFKHLEHFYFHNCPYSGLWKDNHRRHQDVTHTLDVIHTFPSDYKLIFVGDAAMSPY EITMPGGAVEEWNEEPGHVWMRRLLDQWPSAVWLNPAPQARWQWTHSTQMIQQLMDGRMFPMTLEGLDGAMRDLNRNGPR TK
Specific function: Unknown
COG id: COG3825
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46342; Mature: 46342
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLNLFLELRDAKVPVTLKEYLTLLEALAEGVAEMSVDTFYYLSRSCLVKDERNLDKFDR CEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH VFARVFNGVVGEGDELAAALKAAIPEEWLRKLAEKHLTPEEMEQIQSAGGFEKLMETLKK HHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH RLEEQKERHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQHESRHRRAVKVWDERAYRNLDD HHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCH GIELGTRNFRMALRRLRRFAREGAATELDLAGTITSTARAGGWLDLQMRPERHNKVKVLL HHHHCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHCCCCEEEEEECCCCCCCEEEEE LLDIGGSMDEHVRTCEELFSAVRSEFKHLEHFYFHNCPYSGLWKDNHRRHQDVTHTLDVI EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH HTFPSDYKLIFVGDAAMSPYEITMPGGAVEEWNEEPGHVWMRRLLDQWPSAVWLNPAPQA HCCCCCCEEEEEECCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCC RWQWTHSTQMIQQLMDGRMFPMTLEGLDGAMRDLNRNGPRTK CEEECHHHHHHHHHHCCCCCCEEHHHCCHHHHHHCCCCCCCC >Mature Secondary Structure MFLNLFLELRDAKVPVTLKEYLTLLEALAEGVAEMSVDTFYYLSRSCLVKDERNLDKFDR CEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH VFARVFNGVVGEGDELAAALKAAIPEEWLRKLAEKHLTPEEMEQIQSAGGFEKLMETLKK HHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH RLEEQKERHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQHESRHRRAVKVWDERAYRNLDD HHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCH GIELGTRNFRMALRRLRRFAREGAATELDLAGTITSTARAGGWLDLQMRPERHNKVKVLL HHHHCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHCCCCEEEEEECCCCCCCEEEEE LLDIGGSMDEHVRTCEELFSAVRSEFKHLEHFYFHNCPYSGLWKDNHRRHQDVTHTLDVI EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH HTFPSDYKLIFVGDAAMSPYEITMPGGAVEEWNEEPGHVWMRRLLDQWPSAVWLNPAPQA HCCCCCCEEEEEECCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCC RWQWTHSTQMIQQLMDGRMFPMTLEGLDGAMRDLNRNGPRTK CEEECHHHHHHHHHHCCCCCCEEHHHCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA