| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309657
Identifier: 83309657
GI number: 83309657
Start: 607192
End: 607623
Strand: Reverse
Name: 83309657
Synonym: amb0558
Alternate gene names: NA
Gene position: 607623-607192 (Counterclockwise)
Preceding gene: 83309658
Following gene: 83309655
Centisome position: 12.23
GC content: 71.76
Gene sequence:
>432_bases ATGGCCGGAGACGGCGACCTTCCCGAACTGTCCCCCGAGGCCCTGGCCCGGGCCGAGGCCGCTCTGGCCGGGCTCTCCGG GCGCTACCTGGAATGGGCCGCCGCCGATGCGGCCCGACTGCGCGCCTGCCTGGACGAGGCCCAGACGCCCCAGGCCGATC TGGCCCGGCTGATCCCCCGCCTGTTCACCATCAGCCACGACATGAAGGGGCAGGCCGCCACCTTCGGCTATCCCCTGGTC AGCGAACTCGGCGAGCGGCTCTGCCGGATGATCGAGGACAATCCGACCCCCGGCCCCGAGGGACTGGCCCGCCTCGCCCG TCTGGGAGAAGGCATGGCCCGGATCATCGCCGAACGCCTGGAAGGCGACGGCGGCGATGCGGGAAAAGCCCTGTTGGACG ACTGCGGGTCAGAGCCCGGCCAACTCCCGTAA
Upstream 100 bases:
>100_bases GCCCATTTCCGCCGTTGAAATCATCGCCCGCGCCACCGACCTGATCGAACAGGATCGCAGGCGCACCGAGTCGACGGAAC AGGCGGCGGAATAGACCCCC
Downstream 100 bases:
>100_bases TTCCTGGACCAGCTGGCGGGCGCGGCCCGACTGGCGCGGATTCATGCCCTTGGCGATGGCATCGCGGGCGGCCTTGGCAT TCTCCTCGCCCTGGCCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MAGDGDLPELSPEALARAEAALAGLSGRYLEWAAADAARLRACLDEAQTPQADLARLIPRLFTISHDMKGQAATFGYPLV SELGERLCRMIEDNPTPGPEGLARLARLGEGMARIIAERLEGDGGDAGKALLDDCGSEPGQLP
Sequences:
>Translated_143_residues MAGDGDLPELSPEALARAEAALAGLSGRYLEWAAADAARLRACLDEAQTPQADLARLIPRLFTISHDMKGQAATFGYPLV SELGERLCRMIEDNPTPGPEGLARLARLGEGMARIIAERLEGDGGDAGKALLDDCGSEPGQLP >Mature_142_residues AGDGDLPELSPEALARAEAALAGLSGRYLEWAAADAARLRACLDEAQTPQADLARLIPRLFTISHDMKGQAATFGYPLVS ELGERLCRMIEDNPTPGPEGLARLARLGEGMARIIAERLEGDGGDAGKALLDDCGSEPGQLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15026; Mature: 14895
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGDGDLPELSPEALARAEAALAGLSGRYLEWAAADAARLRACLDEAQTPQADLARLIPR CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LFTISHDMKGQAATFGYPLVSELGERLCRMIEDNPTPGPEGLARLARLGEGMARIIAERL HHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH EGDGGDAGKALLDDCGSEPGQLP CCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure AGDGDLPELSPEALARAEAALAGLSGRYLEWAAADAARLRACLDEAQTPQADLARLIPR CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LFTISHDMKGQAATFGYPLVSELGERLCRMIEDNPTPGPEGLARLARLGEGMARIIAERL HHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH EGDGGDAGKALLDDCGSEPGQLP CCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA