| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83309542
Identifier: 83309542
GI number: 83309542
Start: 487708
End: 488556
Strand: Reverse
Name: 83309542
Synonym: amb0443
Alternate gene names: NA
Gene position: 488556-487708 (Counterclockwise)
Preceding gene: 83309562
Following gene: 83309541
Centisome position: 9.84
GC content: 59.6
Gene sequence:
>849_bases GTGGCTCATAGCCTGCTGGGAAACCCCGTGTTCCGCCGCAAGGCGGCGCAACGAGGTGCCCCGGAGGCGAAGTTCGCCCA GTATCCACACCCGCCGCCTGGCGGGTTCTTTTGGGACTTGGTTGCTTGTAGGTACGGTGGACATGACAAGGGATATAACA CGCACAAAATGGCGCATCAAGCGCAAAGCAGCGCGTCCAACCTATGGGCGCACGCACGTTTCGGCCTTTTTTGGCACCGT TTTGTTTTTCAACGGTTTTTCAGGAAAATTGGGGCCGCTCCCAGCTTGGACGTTGGCGTCCAACCTGGACTACGCAGGTT GGACGCCATGACTGTCGGGCAGAGACTTGAGCAGGTTCGAGCTTCAATGGGACTGACCCAGGCCGAAATTGCCGCTCAAT CTGGCGTGCCACTTCGTACCTACAGCAGCTATGCGACAGGCAAGCGGCAGCCTTCAAATGATTTGCTCGAATGGATCGCC CGAAGGGGTTACAGCATCAATTGGCTCCTGACGGGGAGCGGCGCGATGCAGACCGGAGAGTCGATCATTGACCCAACCTG CGGCTCTGGGGCTTTTTTGCTCAATGCGTTCGCGGTTCTTGACGCCGAGTTGAACGGCCGGATCAACGAAGTCGTCACCA CGGTCTACGCCGAGTGCGGCGCCAAGATTGGCCCACGCGACATGGGCCGGGTCACCGCGGAGATCTACAACGAGATCGCC GCTGCTGGCTTGGAGAGTTGGGAAGAGAAGATGGGCGCTTTGCGCCTCGCCGCCGGCCAGTTACGGCGCCGTTTGCTAGC TGCGCCGTCACCGAATCCTACGTCCGACGAAGGTAAACGCTTGGCGTGA
Upstream 100 bases:
>100_bases TCCCCTGCTCGTCAAATCGCTCAGGGAACAGCTGCTGGGCCGTCAGGCCGATGGCTTCGGCGATGACTGCCTCCAAATGC GAGGAGGAGGCGATCAGCGC
Downstream 100 bases:
>100_bases AGGTCGTTTGGACTGCCCCAGCCGACATTGCACCTGATGCGCGCCGTCGCGTCAATCGTATGCACCTGCTGCGGATGATC GAGGGCGGTGGTGGCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MAHSLLGNPVFRRKAAQRGAPEAKFAQYPHPPPGGFFWDLVACRYGGHDKGYNTHKMAHQAQSSASNLWAHARFGLFWHR FVFQRFFRKIGAAPSLDVGVQPGLRRLDAMTVGQRLEQVRASMGLTQAEIAAQSGVPLRTYSSYATGKRQPSNDLLEWIA RRGYSINWLLTGSGAMQTGESIIDPTCGSGAFLLNAFAVLDAELNGRINEVVTTVYAECGAKIGPRDMGRVTAEIYNEIA AAGLESWEEKMGALRLAAGQLRRRLLAAPSPNPTSDEGKRLA
Sequences:
>Translated_282_residues MAHSLLGNPVFRRKAAQRGAPEAKFAQYPHPPPGGFFWDLVACRYGGHDKGYNTHKMAHQAQSSASNLWAHARFGLFWHR FVFQRFFRKIGAAPSLDVGVQPGLRRLDAMTVGQRLEQVRASMGLTQAEIAAQSGVPLRTYSSYATGKRQPSNDLLEWIA RRGYSINWLLTGSGAMQTGESIIDPTCGSGAFLLNAFAVLDAELNGRINEVVTTVYAECGAKIGPRDMGRVTAEIYNEIA AAGLESWEEKMGALRLAAGQLRRRLLAAPSPNPTSDEGKRLA >Mature_281_residues AHSLLGNPVFRRKAAQRGAPEAKFAQYPHPPPGGFFWDLVACRYGGHDKGYNTHKMAHQAQSSASNLWAHARFGLFWHRF VFQRFFRKIGAAPSLDVGVQPGLRRLDAMTVGQRLEQVRASMGLTQAEIAAQSGVPLRTYSSYATGKRQPSNDLLEWIAR RGYSINWLLTGSGAMQTGESIIDPTCGSGAFLLNAFAVLDAELNGRINEVVTTVYAECGAKIGPRDMGRVTAEIYNEIAA AGLESWEEKMGALRLAAGQLRRRLLAAPSPNPTSDEGKRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30815; Mature: 30684
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHSLLGNPVFRRKAAQRGAPEAKFAQYPHPPPGGFFWDLVACRYGGHDKGYNTHKMAHQ CCCCHHCCHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH AQSSASNLWAHARFGLFWHRFVFQRFFRKIGAAPSLDVGVQPGLRRLDAMTVGQRLEQVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ASMGLTQAEIAAQSGVPLRTYSSYATGKRQPSNDLLEWIARRGYSINWLLTGSGAMQTGE HHHCCHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHCCC SIIDPTCGSGAFLLNAFAVLDAELNGRINEVVTTVYAECGAKIGPRDMGRVTAEIYNEIA HHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AAGLESWEEKMGALRLAAGQLRRRLLAAPSPNPTSDEGKRLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AHSLLGNPVFRRKAAQRGAPEAKFAQYPHPPPGGFFWDLVACRYGGHDKGYNTHKMAHQ CCCHHCCHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH AQSSASNLWAHARFGLFWHRFVFQRFFRKIGAAPSLDVGVQPGLRRLDAMTVGQRLEQVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ASMGLTQAEIAAQSGVPLRTYSSYATGKRQPSNDLLEWIARRGYSINWLLTGSGAMQTGE HHHCCHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHCCC SIIDPTCGSGAFLLNAFAVLDAELNGRINEVVTTVYAECGAKIGPRDMGRVTAEIYNEIA HHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AAGLESWEEKMGALRLAAGQLRRRLLAAPSPNPTSDEGKRLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA