Definition Staphylococcus aureus RF122, complete genome.
Accession NC_007622
Length 2,742,531

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The map label for this gene is lip

Identifier: 82752249

GI number: 82752249

Start: 2701076

End: 2703121

Strand: Reverse

Name: lip

Synonym: SAB2546c

Alternate gene names: 82752249

Gene position: 2703121-2701076 (Counterclockwise)

Preceding gene: 82752250

Following gene: 82752248

Centisome position: 98.56

GC content: 34.16

Gene sequence:

>2046_bases
ATGATGAAAAGTCAAAATAAGTATAGTATTCGTAAATTTAGTGTAGGTGCATCTTCCATTTTAATAGCTACATTACTATT
TTTAAGTGGTGGACAAGCACAAGCAACTGAGAAGCAAGTGAATATGGGAAATTCACAGGAGGATACAGTTACAGCACAAT
CTATTGGGGATCAACAAACTAGGGAAAATGCTAATTATCAACGTGAAAACGGTGTTGACGAACAGCAACATACTGAAAAT
TTAACTAAGAACTTGCATAATGATAAAACAATATCAGAAGCAAATCATCGTAAAACAGATGATTTGAATAAAGATCAACT
AAAGGATGATAAAAAATCATCGCTTAATAATAAAAATATTCAACGTGATACAACAAAAAATAACAATGCTAATCCTAGCG
ATGTAAATCAAGGGTTAGAACAGGCTATTAATGATGGCAAACAAAGTAAAGTGGCGTCACAGCAACAGTCAAAACAGGCA
GATAATAGTCAAGATTCAAACGCTAATAACAATCTACCTTCACAAAGTCGAACAAAGGAAGCACTACCATTAAATAAGTC
AAATCAAACAAGCCAACGAGAAATTGTTAATAAGACAGAAATAGAAAAAGTAGAACCACAACAAAATAATCAAGCGAATG
ATAAAATTACTAACTACAATTTTAACAATGAACAAGAAGTGAAACCTCAAAAAGACGAAAAAACACTATCAGTTTCAGAT
TTAAAAAACAATCAAAAATCACCAGTAGAACCAACAAAGGACAATGACAAGAAAAATGGATTAAATTTATTAAAAAGTAG
TGCAGTAGCAACGTTACCAAACAAAGGGACAAAAGAACTTACTGCAAAAGCGAAAGGTGATCAAATGAATAAAGTTGCCA
AACAAGGGCAGTATAAAAATCAAGATCCTATCGTTTTAGTGCATGGTTTCAATGGGTTTACAGATGATATTAATCCTTCA
GTGTTAGCTCATTATTGGGGCGGTAATAAAATGAACATTCGCCAAGATTTAGAAGAAAATGGTTACAAAGCTTATGAAGC
AAGTATAAGTGCTTTTGGAAGTAACTATGACCGCGCAGTTGAACTTTATTATTATATCAAAGGCGGTCGTGTAGATTATG
GTGCAGCACATGCAGCAAAATATGGACATGAACGTTATGGAAAAACATACGAAGGAATTTACAAAGACTGGAAACCAGGA
CAGAAGGTACACCTAGTTGGACATAGTATGGGCGGTCAAACGATACGTCAACTAGAAGAATTACTGCGTAATGGTAATCG
TGAAGAAATAGAGTATCAAAAGAAACATGGTGGTGAAATTTCTCCACTATTCAAAGGTAATAATGACAATATGATTTCAT
CAATTACTACTTTAGGAACACCACATAATGGTACACACGCATCAGATTTAGCTGGTAATGAAGCTTTAGTGAGACAAATC
GTATTTGATATCGGTAAAATGTTTGGTAATAAAAATTCAAGAGTAGACTTCGGGTTGGCTCAATGGGGTCTAAAACAGAA
GCCAAATGAATCATATATTGATTATGTCAAACGCGTTAAACAATCTAATTTATGGAAATCAAAAGATAATGGATTTTACG
ATCTGACGCGTGAGGGTGCAACAGATTTAAATCGTAAAACGTCGTTGAACCCTAACATTGTGTATAAAACATACACTGGT
GAAGCAACGCACAAAGCATTAAATAGCGATAGACAAAAAGCAGACTTAAATATGTTTTTCCCATTTGTGATTACTGGTAA
CTTAATCGGTAAAGCTACTGAAAAAGAATGGCGAGAAAACGATGGTTTAGTATCCGTTATTTCTTCTCAACATCCATTTA
ATCAAGCTTATACAAATGCGACGGATAAAATTCAAAAAGGCATTTGGCAAGTAACGCCTACAAAACATGATTGGGATCAT
GTTGACTTTGTCGGACAAGATAGTTCTGATACAGTGCGCACAAGAGAAGAATTACAAGATTTTTGGCATCATTTAGCAGA
CGATTTAGTGAAAACTGAAAAGGTGACTGATACTAAGCAAGCATAA

Upstream 100 bases:

>100_bases
GATGGTCATTATGAGTGCTTGGTTAAGTAAATTATTTGAGTTTATTCCTCGAATAATTATCAATTTGTTTATCTAAAATA
AAAAAATAGAGGTGCTGACA

Downstream 100 bases:

>100_bases
TTTATAAAGTAAAGGGAGGTATATACAATGACAGCAGACTTCTTTCAATTAATCGGATCATTATTTAGAATTCTAAAAGA
ATTATTCAAGTAATATCTTG

Product: triacylglycerol lipase precursor

Products: NA

Alternate protein names: Glycerol ester hydrolase 1 [H]

Number of amino acids: Translated: 681; Mature: 681

Protein sequence:

>681_residues
MMKSQNKYSIRKFSVGASSILIATLLFLSGGQAQATEKQVNMGNSQEDTVTAQSIGDQQTRENANYQRENGVDEQQHTEN
LTKNLHNDKTISEANHRKTDDLNKDQLKDDKKSSLNNKNIQRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKQA
DNSQDSNANNNLPSQSRTKEALPLNKSNQTSQREIVNKTEIEKVEPQQNNQANDKITNYNFNNEQEVKPQKDEKTLSVSD
LKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGTKELTAKAKGDQMNKVAKQGQYKNQDPIVLVHGFNGFTDDINPS
VLAHYWGGNKMNIRQDLEENGYKAYEASISAFGSNYDRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGIYKDWKPG
QKVHLVGHSMGGQTIRQLEELLRNGNREEIEYQKKHGGEISPLFKGNNDNMISSITTLGTPHNGTHASDLAGNEALVRQI
VFDIGKMFGNKNSRVDFGLAQWGLKQKPNESYIDYVKRVKQSNLWKSKDNGFYDLTREGATDLNRKTSLNPNIVYKTYTG
EATHKALNSDRQKADLNMFFPFVITGNLIGKATEKEWRENDGLVSVISSQHPFNQAYTNATDKIQKGIWQVTPTKHDWDH
VDFVGQDSSDTVRTREELQDFWHHLADDLVKTEKVTDTKQA

Sequences:

>Translated_681_residues
MMKSQNKYSIRKFSVGASSILIATLLFLSGGQAQATEKQVNMGNSQEDTVTAQSIGDQQTRENANYQRENGVDEQQHTEN
LTKNLHNDKTISEANHRKTDDLNKDQLKDDKKSSLNNKNIQRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKQA
DNSQDSNANNNLPSQSRTKEALPLNKSNQTSQREIVNKTEIEKVEPQQNNQANDKITNYNFNNEQEVKPQKDEKTLSVSD
LKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGTKELTAKAKGDQMNKVAKQGQYKNQDPIVLVHGFNGFTDDINPS
VLAHYWGGNKMNIRQDLEENGYKAYEASISAFGSNYDRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGIYKDWKPG
QKVHLVGHSMGGQTIRQLEELLRNGNREEIEYQKKHGGEISPLFKGNNDNMISSITTLGTPHNGTHASDLAGNEALVRQI
VFDIGKMFGNKNSRVDFGLAQWGLKQKPNESYIDYVKRVKQSNLWKSKDNGFYDLTREGATDLNRKTSLNPNIVYKTYTG
EATHKALNSDRQKADLNMFFPFVITGNLIGKATEKEWRENDGLVSVISSQHPFNQAYTNATDKIQKGIWQVTPTKHDWDH
VDFVGQDSSDTVRTREELQDFWHHLADDLVKTEKVTDTKQA
>Mature_681_residues
MMKSQNKYSIRKFSVGASSILIATLLFLSGGQAQATEKQVNMGNSQEDTVTAQSIGDQQTRENANYQRENGVDEQQHTEN
LTKNLHNDKTISEANHRKTDDLNKDQLKDDKKSSLNNKNIQRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKQA
DNSQDSNANNNLPSQSRTKEALPLNKSNQTSQREIVNKTEIEKVEPQQNNQANDKITNYNFNNEQEVKPQKDEKTLSVSD
LKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGTKELTAKAKGDQMNKVAKQGQYKNQDPIVLVHGFNGFTDDINPS
VLAHYWGGNKMNIRQDLEENGYKAYEASISAFGSNYDRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGIYKDWKPG
QKVHLVGHSMGGQTIRQLEELLRNGNREEIEYQKKHGGEISPLFKGNNDNMISSITTLGTPHNGTHASDLAGNEALVRQI
VFDIGKMFGNKNSRVDFGLAQWGLKQKPNESYIDYVKRVKQSNLWKSKDNGFYDLTREGATDLNRKTSLNPNIVYKTYTG
EATHKALNSDRQKADLNMFFPFVITGNLIGKATEKEWRENDGLVSVISSQHPFNQAYTNATDKIQKGIWQVTPTKHDWDH
VDFVGQDSSDTVRTREELQDFWHHLADDLVKTEKVTDTKQA

Specific function: Unknown

COG id: COG1075

COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005877 [H]

Pfam domain/function: PF04650 YSIRK_signal [H]

EC number: =3.1.1.3 [H]

Molecular weight: Translated: 76686; Mature: 76686

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKSQNKYSIRKFSVGASSILIATLLFLSGGQAQATEKQVNMGNSQEDTVTAQSIGDQQT
CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHEEHHHCCCHHH
RENANYQRENGVDEQQHTENLTKNLHNDKTISEANHRKTDDLNKDQLKDDKKSSLNNKNI
HHCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHCCHHHHCCCCCCC
QRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKQADNSQDSNANNNLPSQSRTKE
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCC
ALPLNKSNQTSQREIVNKTEIEKVEPQQNNQANDKITNYNFNNEQEVKPQKDEKTLSVSD
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHH
LKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGTKELTAKAKGDQMNKVAKQGQYKN
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHCCCHHHHHHHHCCCCCC
QDPIVLVHGFNGFTDDINPSVLAHYWGGNKMNIRQDLEENGYKAYEASISAFGSNYDRAV
CCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEE
ELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGIYKDWKPGQKVHLVGHSMGGQTIRQLEE
EEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHH
LLRNGNREEIEYQKKHGGEISPLFKGNNDNMISSITTLGTPHNGTHASDLAGNEALVRQI
HHHCCCHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCHHHCCCCHHHHHHH
VFDIGKMFGNKNSRVDFGLAQWGLKQKPNESYIDYVKRVKQSNLWKSKDNGFYDLTREGA
HHHHHHHHCCCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC
TDLNRKTSLNPNIVYKTYTGEATHKALNSDRQKADLNMFFPFVITGNLIGKATEKEWREN
CCCCCCCCCCCCEEEEECCCHHHHHHHHCHHHHCCHHEEEHHEEECCHHCCHHHHHHHHC
DGLVSVISSQHPFNQAYTNATDKIQKGIWQVTPTKHDWDHVDFVGQDSSDTVRTREELQD
CCEEEEECCCCCCHHHHCCHHHHHHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
FWHHLADDLVKTEKVTDTKQA
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMKSQNKYSIRKFSVGASSILIATLLFLSGGQAQATEKQVNMGNSQEDTVTAQSIGDQQT
CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHEEHHHCCCHHH
RENANYQRENGVDEQQHTENLTKNLHNDKTISEANHRKTDDLNKDQLKDDKKSSLNNKNI
HHCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHCCHHHHCCCCCCC
QRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKQADNSQDSNANNNLPSQSRTKE
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCC
ALPLNKSNQTSQREIVNKTEIEKVEPQQNNQANDKITNYNFNNEQEVKPQKDEKTLSVSD
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHH
LKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGTKELTAKAKGDQMNKVAKQGQYKN
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHCCCHHHHHHHHCCCCCC
QDPIVLVHGFNGFTDDINPSVLAHYWGGNKMNIRQDLEENGYKAYEASISAFGSNYDRAV
CCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEE
ELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGIYKDWKPGQKVHLVGHSMGGQTIRQLEE
EEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHH
LLRNGNREEIEYQKKHGGEISPLFKGNNDNMISSITTLGTPHNGTHASDLAGNEALVRQI
HHHCCCHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCHHHCCCCHHHHHHH
VFDIGKMFGNKNSRVDFGLAQWGLKQKPNESYIDYVKRVKQSNLWKSKDNGFYDLTREGA
HHHHHHHHCCCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC
TDLNRKTSLNPNIVYKTYTGEATHKALNSDRQKADLNMFFPFVITGNLIGKATEKEWREN
CCCCCCCCCCCCEEEEECCCHHHHHHHHCHHHHCCHHEEEHHEEECCHHCCHHHHHHHHC
DGLVSVISSQHPFNQAYTNATDKIQKGIWQVTPTKHDWDHVDFVGQDSSDTVRTREELQD
CCEEEEECCCCCCHHHHCCHHHHHHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
FWHHLADDLVKTEKVTDTKQA
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA