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The map label for this gene is secY [H]

Identifier: 82752233

GI number: 82752233

Start: 2682186

End: 2683232

Strand: Reverse

Name: secY [H]

Synonym: SAB2528c

Alternate gene names: 82752233

Gene position: 2683232-2682186 (Counterclockwise)

Preceding gene: 82752237

Following gene: 82752232

Centisome position: 97.84

GC content: 29.8

Gene sequence:

>1047_bases
ATGGGTGGAGACGTTAATACTTTAAACATTTTTACTTTGGGATTAGGTCCGTGGCTAACATCAATGATTATCTTGATGCT
GATTTCTTATCGGAATATGGATAAATACATGAAACAAACAAGTCTTGAGAAGCATTATAAAGAGCGCATCTTAACATTAA
TTTTAAGTGTTATTCAAAGTTATTTTGTGATTCATGAATATGTTTCGAAACAACGTGTTCATCAAGACAATATTTACTTA
ACAATATTGATTTTGGTTACTGGAACGATGTTATTAGTTTGGTTAGCTGACAAAAATAGTCGTTACGGCATCGCAGGACC
AATGCCGATTGTAATGGTTAGCATTATTAAATCAATGATGCATCAAAAAATGGAATATATAGATGCAAGTCATATTGTGA
TTGCGTTGTTAATCATCCTTGTGATAATCACATTGTTTATCCTATTATTCATTGAATTAGTAGAAGTTAGAATTCCGTAT
ATTGATTTGATGAATGTCTCGGCTACAAATATGAAATCTTATTTGTCTTGGAAGGTTAATCCTGCAGGCAGTATTACATT
AATGATGAGCATTTCAGCTTTTGTTTTCTTAAAAAGTGGCATTCATTTTATTTTATCAATTTTTAATAAAAGCATATCAG
ATGACATGCCAATGCTGAAGTTTGATAGTCCAGTAGGTATTTCAGTATATTTAGTGATTCAAATGTTATTGGGTTATTTT
TTATCGAGATTTTTAATAAATACAAAACAAAAATCAAAAGACTTCTTGAAAAGTGGTAATTATTTTTCAGGAGTTAAACC
TGGTAAGGATACAGAACGTTATTTAAATTATCAAGCACGACGCGTATGTTGGTTTGGATCGGCATTAGTTACAATCATTA
TTGGTATACCGCTTTATTTCACACTGTTTGTACCGCATTTATCTATTGAAATTTATTTCTCAGTACAACTGATTGTATTA
GTTTACATCAGTATTAATATTGCAGAAACAATTCGTACATATTTATATTTTGATAAATATAAGTCATTTTTAAACCAGTA
TTGGTAA

Upstream 100 bases:

>100_bases
TTATCTTGTTTATTTATATATTAGGTTCAAATATTTCTATCGTTTCGTATAACGATATGCAAGTAAACATGAGTCGTTTT
TTAAAATAGCTATTTCTAAT

Downstream 100 bases:

>100_bases
GGAGGTAATTATGAAATACTTTATTCCAGCTTGGTATGATGACCAACGATGGTGGCAAGACACGACTGTGCCGTATTATC
AGACGCAAAATAAGACGGAA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MGGDVNTLNIFTLGLGPWLTSMIILMLISYRNMDKYMKQTSLEKHYKERILTLILSVIQSYFVIHEYVSKQRVHQDNIYL
TILILVTGTMLLVWLADKNSRYGIAGPMPIVMVSIIKSMMHQKMEYIDASHIVIALLIILVIITLFILLFIELVEVRIPY
IDLMNVSATNMKSYLSWKVNPAGSITLMMSISAFVFLKSGIHFILSIFNKSISDDMPMLKFDSPVGISVYLVIQMLLGYF
LSRFLINTKQKSKDFLKSGNYFSGVKPGKDTERYLNYQARRVCWFGSALVTIIIGIPLYFTLFVPHLSIEIYFSVQLIVL
VYISINIAETIRTYLYFDKYKSFLNQYW

Sequences:

>Translated_348_residues
MGGDVNTLNIFTLGLGPWLTSMIILMLISYRNMDKYMKQTSLEKHYKERILTLILSVIQSYFVIHEYVSKQRVHQDNIYL
TILILVTGTMLLVWLADKNSRYGIAGPMPIVMVSIIKSMMHQKMEYIDASHIVIALLIILVIITLFILLFIELVEVRIPY
IDLMNVSATNMKSYLSWKVNPAGSITLMMSISAFVFLKSGIHFILSIFNKSISDDMPMLKFDSPVGISVYLVIQMLLGYF
LSRFLINTKQKSKDFLKSGNYFSGVKPGKDTERYLNYQARRVCWFGSALVTIIIGIPLYFTLFVPHLSIEIYFSVQLIVL
VYISINIAETIRTYLYFDKYKSFLNQYW
>Mature_347_residues
GGDVNTLNIFTLGLGPWLTSMIILMLISYRNMDKYMKQTSLEKHYKERILTLILSVIQSYFVIHEYVSKQRVHQDNIYLT
ILILVTGTMLLVWLADKNSRYGIAGPMPIVMVSIIKSMMHQKMEYIDASHIVIALLIILVIITLFILLFIELVEVRIPYI
DLMNVSATNMKSYLSWKVNPAGSITLMMSISAFVFLKSGIHFILSIFNKSISDDMPMLKFDSPVGISVYLVIQMLLGYFL
SRFLINTKQKSKDFLKSGNYFSGVKPGKDTERYLNYQARRVCWFGSALVTIIIGIPLYFTLFVPHLSIEIYFSVQLIVLV
YISINIAETIRTYLYFDKYKSFLNQYW

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 40211; Mature: 40080

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGDVNTLNIFTLGLGPWLTSMIILMLISYRNMDKYMKQTSLEKHYKERILTLILSVIQS
CCCCCEEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFVIHEYVSKQRVHQDNIYLTILILVTGTMLLVWLADKNSRYGIAGPMPIVMVSIIKSMM
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHH
HQKMEYIDASHIVIALLIILVIITLFILLFIELVEVRIPYIDLMNVSATNMKSYLSWKVN
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHEEEEC
PAGSITLMMSISAFVFLKSGIHFILSIFNKSISDDMPMLKFDSPVGISVYLVIQMLLGYF
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHH
LSRFLINTKQKSKDFLKSGNYFSGVKPGKDTERYLNYQARRVCWFGSALVTIIIGIPLYF
HHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLFVPHLSIEIYFSVQLIVLVYISINIAETIRTYLYFDKYKSFLNQYW
HHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GGDVNTLNIFTLGLGPWLTSMIILMLISYRNMDKYMKQTSLEKHYKERILTLILSVIQS
CCCCEEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFVIHEYVSKQRVHQDNIYLTILILVTGTMLLVWLADKNSRYGIAGPMPIVMVSIIKSMM
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHH
HQKMEYIDASHIVIALLIILVIITLFILLFIELVEVRIPYIDLMNVSATNMKSYLSWKVN
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHEEEEC
PAGSITLMMSISAFVFLKSGIHFILSIFNKSISDDMPMLKFDSPVGISVYLVIQMLLGYF
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHH
LSRFLINTKQKSKDFLKSGNYFSGVKPGKDTERYLNYQARRVCWFGSALVTIIIGIPLYF
HHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLFVPHLSIEIYFSVQLIVLVYISINIAETIRTYLYFDKYKSFLNQYW
HHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]