| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82752231
Identifier: 82752231
GI number: 82752231
Start: 2679064
End: 2680632
Strand: Reverse
Name: 82752231
Synonym: SAB2526c
Alternate gene names: NA
Gene position: 2680632-2679064 (Counterclockwise)
Preceding gene: 82752232
Following gene: 82752230
Centisome position: 97.74
GC content: 36.01
Gene sequence:
>1569_bases ATGCCACGTAAATTTAGAGTTTTGCAAATTGGAGGAGACGATTTAGAACCTATTTTCCAACACAAAAAAGGTGTGAGTTG GGATTACTTCGATATTGGATTGTTTGAATTTGATAGTGGTTATGTAGAGGCTATTGAAGCGATTGTTGAAGCAGAAGGGC GCTTTGATTTTATCTATATTCAAGCACCATACTCGGAGACATTAACGAATTTATTACAAATGATAAGCGAACCATACAAT ACGTATGTTGATGAATCATTTTGGTCAGTTGAATATGAACAAGACGAAAATGTCCAAAAATACGTTGTTCAACCATTACA TTACCGGAACATTGAAGAACGTAATAATAAATTAGAGGCAGTTAGCTTCTCAGGACAGTATGGAGATAAGGTTTCTCCTA AGTTAGCACTTGTTCATCCGAATTTTAAAGGAGATGTCGTTTACCAAGGTAATTCAGAGCTCACGTTGAGTGGAGAATTT GGAAAAGAATTTAAACCTATCGCATCTTGGCAAAATAATCTCGTTTACGATAAAGATAAAGTCATTCAAATATGGCCAGA ATTTGATATTGATGGTGCGGTCGAGTTGCAATATACATTTAGATTGATTCAGACTGGCGCTGATGGTGCATTAATTGAAC AAATCATATTGACTGATGATATGTTAGATAGTCCTTTAGAGATACCTACGAAACCATTTGATGCTTATATAAGTGTAACT GTTAAGGCGCGTGGCAACGGGACGGTACATTTAGGACCTATACACAAACGATGGTCTAGATTAGACATGGGTCAATTTTT ACTTGGTGGTAGTCGTTTCGTAGATAGTCAACGACAGGAATTTATTTATTATTTTCACCCTGGTGATATGAAACCACCAC TAAACGTATATTTTAGTGGTTATCGAACAGCGGAAGGTTTCGAAGGATATTATATGATGAAACGTATGAATGCACCGTTT TTACTTATCGGCGATCCTCGTGTTGAAGGTGGTAGCTTTTATATCGGTTTATCTGAATATGAACAAGGTATTATCAATGT TATTGACGAGACATTAGAAAAGCTGAATTTTAAATCACATGAATTAATATTATCTGGTTTATCTATGGGTTCATTTGGTG CCTTGTATTATGGTGCTCAGTTAAATCCTCAGGCAATTATTGTTGGTAAACCACTTGTTAATATTGGAACGATTGCTGAA CATATGCGATTACTTAGACCAGAAGAGTTCGGTACAGCATTAGACGTCCTGGTGTCTAATGAAGGTGATACATCTCAAGC GTCGATACAGGCATTAAATCAAAAATTTTGGCAAACATTTCAAAAGAAATCATTGTCACAAACTGTTTTTGCCATAGCAT ATATGCAACATGATGATTATGATCCACATGCATTTCAAGAGCTACTACCTGTATTGACAGCACACCAAGCAAGAGTGATG AATCGCAGTATTCCTGGGCGACATAATGATGATTCACCTACCATTGCAAGTTGGTTTGTTAATTTTTACAACATTATTTT GGAAGACAAGTTTGGGAGAGTTCAACATGCTGAAAAACAAAACATTTAA
Upstream 100 bases:
>100_bases AATTGGAATTATGCGTACGCCTATTCTTTAAAATTAATAGATGCATATGCTTCTAAGAATATTATTAATCAGCTCGATGA GTTAATAGAAGGTGAAAATG
Downstream 100 bases:
>100_bases AGTTACTTGGGATTATATTTCACAAACTACATTTATGTATGGCTCAAAAGTATCATTTTCAAATGGTGAAGTGACTTTTA TAAATCCTTTGATGCCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Accessory Sec System; Accessory Secretory ; Accessory Sescretory Protein; LOW QUALITY PROTEIN Accessory Sec System
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MPRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEAIEAIVEAEGRFDFIYIQAPYSETLTNLLQMISEPYN TYVDESFWSVEYEQDENVQKYVVQPLHYRNIEERNNKLEAVSFSGQYGDKVSPKLALVHPNFKGDVVYQGNSELTLSGEF GKEFKPIASWQNNLVYDKDKVIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIILTDDMLDSPLEIPTKPFDAYISVT VKARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDSQRQEFIYYFHPGDMKPPLNVYFSGYRTAEGFEGYYMMKRMNAPF LLIGDPRVEGGSFYIGLSEYEQGIINVIDETLEKLNFKSHELILSGLSMGSFGALYYGAQLNPQAIIVGKPLVNIGTIAE HMRLLRPEEFGTALDVLVSNEGDTSQASIQALNQKFWQTFQKKSLSQTVFAIAYMQHDDYDPHAFQELLPVLTAHQARVM NRSIPGRHNDDSPTIASWFVNFYNIILEDKFGRVQHAEKQNI
Sequences:
>Translated_522_residues MPRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEAIEAIVEAEGRFDFIYIQAPYSETLTNLLQMISEPYN TYVDESFWSVEYEQDENVQKYVVQPLHYRNIEERNNKLEAVSFSGQYGDKVSPKLALVHPNFKGDVVYQGNSELTLSGEF GKEFKPIASWQNNLVYDKDKVIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIILTDDMLDSPLEIPTKPFDAYISVT VKARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDSQRQEFIYYFHPGDMKPPLNVYFSGYRTAEGFEGYYMMKRMNAPF LLIGDPRVEGGSFYIGLSEYEQGIINVIDETLEKLNFKSHELILSGLSMGSFGALYYGAQLNPQAIIVGKPLVNIGTIAE HMRLLRPEEFGTALDVLVSNEGDTSQASIQALNQKFWQTFQKKSLSQTVFAIAYMQHDDYDPHAFQELLPVLTAHQARVM NRSIPGRHNDDSPTIASWFVNFYNIILEDKFGRVQHAEKQNI >Mature_521_residues PRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEAIEAIVEAEGRFDFIYIQAPYSETLTNLLQMISEPYNT YVDESFWSVEYEQDENVQKYVVQPLHYRNIEERNNKLEAVSFSGQYGDKVSPKLALVHPNFKGDVVYQGNSELTLSGEFG KEFKPIASWQNNLVYDKDKVIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIILTDDMLDSPLEIPTKPFDAYISVTV KARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDSQRQEFIYYFHPGDMKPPLNVYFSGYRTAEGFEGYYMMKRMNAPFL LIGDPRVEGGSFYIGLSEYEQGIINVIDETLEKLNFKSHELILSGLSMGSFGALYYGAQLNPQAIIVGKPLVNIGTIAEH MRLLRPEEFGTALDVLVSNEGDTSQASIQALNQKFWQTFQKKSLSQTVFAIAYMQHDDYDPHAFQELLPVLTAHQARVMN RSIPGRHNDDSPTIASWFVNFYNIILEDKFGRVQHAEKQNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59641; Mature: 59510
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEAIEAIVEAEGRFDFIYI CCCCEEEEEECCCCCHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCCEEEEEE QAPYSETLTNLLQMISEPYNTYVDESFWSVEYEQDENVQKYVVQPLHYRNIEERNNKLEA ECCHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCCCCHHHHHHCCHHHCCHHHHCCEEEE VSFSGQYGDKVSPKLALVHPNFKGDVVYQGNSELTLSGEFGKEFKPIASWQNNLVYDKDK EEECCCCCCCCCCEEEEECCCCCCCEEEECCCEEEEECCCCCCCCCHHHHCCCEEECCCC VIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIILTDDMLDSPLEIPTKPFDAYISVT EEEECCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE VKARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDSQRQEFIYYFHPGDMKPPLNVYFSG EEECCCCEEEECCHHHHHHHCCCCHHHHCCHHHHCCCCCCEEEEECCCCCCCCCEEEEEC YRTAEGFEGYYMMKRMNAPFLLIGDPRVEGGSFYIGLSEYEQGIINVIDETLEKLNFKSH EECCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCH ELILSGLSMGSFGALYYGAQLNPQAIIVGKPLVNIGTIAEHMRLLRPEEFGTALDVLVSN HHHEECCCCCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHCCEEEEEEEC EGDTSQASIQALNQKFWQTFQKKSLSQTVFAIAYMQHDDYDPHAFQELLPVLTAHQARVM CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH NRSIPGRHNDDSPTIASWFVNFYNIILEDKFGRVQHAEKQNI HCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCC >Mature Secondary Structure PRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEAIEAIVEAEGRFDFIYI CCCEEEEEECCCCCHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCCEEEEEE QAPYSETLTNLLQMISEPYNTYVDESFWSVEYEQDENVQKYVVQPLHYRNIEERNNKLEA ECCHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCCCCHHHHHHCCHHHCCHHHHCCEEEE VSFSGQYGDKVSPKLALVHPNFKGDVVYQGNSELTLSGEFGKEFKPIASWQNNLVYDKDK EEECCCCCCCCCCEEEEECCCCCCCEEEECCCEEEEECCCCCCCCCHHHHCCCEEECCCC VIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIILTDDMLDSPLEIPTKPFDAYISVT EEEECCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE VKARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDSQRQEFIYYFHPGDMKPPLNVYFSG EEECCCCEEEECCHHHHHHHCCCCHHHHCCHHHHCCCCCCEEEEECCCCCCCCCEEEEEC YRTAEGFEGYYMMKRMNAPFLLIGDPRVEGGSFYIGLSEYEQGIINVIDETLEKLNFKSH EECCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCH ELILSGLSMGSFGALYYGAQLNPQAIIVGKPLVNIGTIAEHMRLLRPEEFGTALDVLVSN HHHEECCCCCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHCCEEEEEEEC EGDTSQASIQALNQKFWQTFQKKSLSQTVFAIAYMQHDDYDPHAFQELLPVLTAHQARVM CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH NRSIPGRHNDDSPTIASWFVNFYNIILEDKFGRVQHAEKQNI HCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA