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The map label for this gene is ypdA [H]

Identifier: 82752165

GI number: 82752165

Start: 2597322

End: 2598428

Strand: Reverse

Name: ypdA [H]

Synonym: SAB2458c

Alternate gene names: 82752165

Gene position: 2598428-2597322 (Counterclockwise)

Preceding gene: 82752166

Following gene: 82752164

Centisome position: 94.75

GC content: 35.32

Gene sequence:

>1107_bases
ATGCAACATCATAAAGTGGCTATTATCGGTGCCGGTGCTGCAGGTATAGGTATGGCCATTACCTTAAAAGATTTCGGTAT
AACAGATGTCATTATTTTAGAAAAAGGAACAGTAGGACATTCATTTAAACATTGGCCGAAATCGACCCGTACGATTACGC
CATCATTTACGTCTAATGGATTTGGCATGCCTGATATGAATGCAATTTCCATGGATACTTCACCAGCATTTACATTTAAT
GAAGAACATATTTCCGGAGAAACATATGCTGAATATTTACAAGTGGTTGCCAACCATTACGAGCTGAATATTTTTGAAAA
TACAATTGTCACAAATATATCTGTAGATGATGCATATTATACGATTGCAACGACAACAGAGACATATCACGCGGATTATA
TCTTTGTCGCAACAGGTGATTATAATTTCCCTAAAAAGCCATTTAAATATGGTATTCATTATAGTGAAATTGAAGACTTT
GATAACTTTAATAATGGGCAATATGTGGTTATCGGAGGTAATGAAAGTGGCTTTGATGCTGCATATCAACTTGCAAAAAA
TGGCTCTGACATCGCACTTTATACTAGCACAACCGGTTTAAATGATCCGGATGCTGATCCTAGTGTTAGATTGTCACCTT
ATACACGTCAGCGACTAGGTAATGTCATTAAGCAAGGTGCTCGCATTGAAATGAATGTACATTATACAGTTAAAGATATT
AATTTTAACAACGGACAGTATCATATCAGTTTTGATAGCGGACAAAGTGTGCATACGCCTCATGAACCAATACTAGCAAC
TGGCTTTGATGCAACAAAAAATCCAATCGTTCAACAATTATTTGTGACAACAAATCAAGATATTAAATTAACAACACATG
ATGAATCGACACGTTATCCGAATATTTTTATGATTGGTGCAACAGTTGAAAATGATAATGCCAAATTATGCTATATCTAT
AAATTCAGAGCGCGATTTGCAGTACTTGCACATCTTTTAACACAGCGGGAAGGCTTACCAGCTAAACAAGAGGTCATTGA
AAATTACCAAAAAAATCAAATGTATTTAGATGATTATTCATGTTGTGAAGTGTCATGCACATGTTAG

Upstream 100 bases:

>100_bases
TGAAATTTCTCAAGGATAGGTCTATACTTTATAAATCGTAATTATTACGATTTATAACCAAAAACAATAACTTGAAATAG
ATCATTGAGGGAGTGTTAAT

Downstream 100 bases:

>100_bases
AAGTGAAATATGATATGAGAACGGGGCATTATACGCCCATACCTAATGAACCTCATTATTTGGTTATTAGTCATGCGGAT
AAACTTACCGCAACAGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN
EEHISGETYAEYLQVVANHYELNIFENTIVTNISVDDAYYTIATTTETYHADYIFVATGDYNFPKKPFKYGIHYSEIEDF
DNFNNGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDI
NFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIY
KFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC

Sequences:

>Translated_368_residues
MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN
EEHISGETYAEYLQVVANHYELNIFENTIVTNISVDDAYYTIATTTETYHADYIFVATGDYNFPKKPFKYGIHYSEIEDF
DNFNNGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDI
NFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIY
KFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC
>Mature_368_residues
MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN
EEHISGETYAEYLQVVANHYELNIFENTIVTNISVDDAYYTIATTTETYHADYIFVATGDYNFPKKPFKYGIHYSEIEDF
DNFNNGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDI
NFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIY
KFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR001327
- InterPro:   IPR000103 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 41194; Mature: 41194

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNG
CCCEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHCCCCCCCEECCCCCCCC
FGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTIVTNISVDDAYY
CCCCCCCEEEECCCCCEEECHHHCCCHHHHHHHHHHHCCEEEEEECCEEEEEEEECCEEE
TIATTTETYHADYIFVATGDYNFPKKPFKYGIHYSEIEDFDNFNNGQYVVIGGNESGFDA
EEEEECEEEECCEEEEEECCCCCCCCHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCHHH
AYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDI
HHHHHCCCCEEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHCCCEEEEEEEEEEEEE
NFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYP
ECCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHEEEEECCCCEEEEECCCCCCCC
NIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYS
EEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEECCCC
CCEVSCTC
EEEEEECC
>Mature Secondary Structure
MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNG
CCCEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHCCCCCCCEECCCCCCCC
FGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTIVTNISVDDAYY
CCCCCCCEEEECCCCCEEECHHHCCCHHHHHHHHHHHCCEEEEEECCEEEEEEEECCEEE
TIATTTETYHADYIFVATGDYNFPKKPFKYGIHYSEIEDFDNFNNGQYVVIGGNESGFDA
EEEEECEEEECCEEEEEECCCCCCCCHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCHHH
AYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDI
HHHHHCCCCEEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHCCCEEEEEEEEEEEEE
NFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYP
ECCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHEEEEECCCCEEEEECCCCCCCC
NIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYS
EEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEECCCC
CCEVSCTC
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]