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The map label for this gene is 82752135

Identifier: 82752135

GI number: 82752135

Start: 2566085

End: 2566633

Strand: Direct

Name: 82752135

Synonym: SAB2427

Alternate gene names: NA

Gene position: 2566085-2566633 (Clockwise)

Preceding gene: 82752131

Following gene: 82752138

Centisome position: 93.57

GC content: 29.33

Gene sequence:

>549_bases
ATGAAAGAGACCGATTTAAGAGTGATTAAGACAAAGAAAGCATTGTCTTCAAGTTTGCTTCAATTGTTAGAACAACATTT
GTTCCAGACAATTACTGTCAACCAAATTTGTCATAACGCGCTCGTACACCGTACAACATTTTATAAACATTTTTATGATA
AATATGACTTACTTGAATATTTGTTCAATCAATTGACCAAAGCATATTTTGCGACTGATATTAGTGATCGCCTTAACCAC
CCATTCCAAACGATTAACGATACAATTAATAATAAAGAAGACTTACAAAAAGTAGCAGACTTCCAACAAGAAGATGCAGA
GTTTAATAAAGTTTTAAAAAATGTTTGCATTAAAATTATGAATGACGACATCAAAAACAATAGCGACAGAATTGATGTCG
ATGGAGATATTCCTAATAATTTACTATTTTATATATACGGTTCATTGATTGAAGGATTTTTATATTGGATTAAAGATGAA
AAAATTGATTGGCCTAGCGAGGAAATTGATAAAATTTTCCATAAGGTAATAAATATAAAGATTAAGTAG

Upstream 100 bases:

>100_bases
CAGTGTAGATTATTGTTCGATTATAGTATCTATACCATGCATCTTAAAGAACTAATTTTTGAATTCTGTATTTTAAACTA
CATATTAAGGAGAAATGTAG

Downstream 100 bases:

>100_bases
TAGATGAGAAACTCATAAGCGTTACCAACATTCATAAAAAAACGATAGTGTACACGTTAATGAATGCGTGTACTACTATC
GTTTTTTATTTTTATCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: TetR Family Regulatory Protein; Transcriptional Regulator; Transcriptional Regulator TetR-Family; Regulatory Protein TetR

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKETDLRVIKTKKALSSSLLQLLEQHLFQTITVNQICHNALVHRTTFYKHFYDKYDLLEYLFNQLTKAYFATDISDRLNH
PFQTINDTINNKEDLQKVADFQQEDAEFNKVLKNVCIKIMNDDIKNNSDRIDVDGDIPNNLLFYIYGSLIEGFLYWIKDE
KIDWPSEEIDKIFHKVINIKIK

Sequences:

>Translated_182_residues
MKETDLRVIKTKKALSSSLLQLLEQHLFQTITVNQICHNALVHRTTFYKHFYDKYDLLEYLFNQLTKAYFATDISDRLNH
PFQTINDTINNKEDLQKVADFQQEDAEFNKVLKNVCIKIMNDDIKNNSDRIDVDGDIPNNLLFYIYGSLIEGFLYWIKDE
KIDWPSEEIDKIFHKVINIKIK
>Mature_182_residues
MKETDLRVIKTKKALSSSLLQLLEQHLFQTITVNQICHNALVHRTTFYKHFYDKYDLLEYLFNQLTKAYFATDISDRLNH
PFQTINDTINNKEDLQKVADFQQEDAEFNKVLKNVCIKIMNDDIKNNSDRIDVDGDIPNNLLFYIYGSLIEGFLYWIKDE
KIDWPSEEIDKIFHKVINIKIK

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21610; Mature: 21610

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETDLRVIKTKKALSSSLLQLLEQHLFQTITVNQICHNALVHRTTFYKHFYDKYDLLEY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFNQLTKAYFATDISDRLNHPFQTINDTINNKEDLQKVADFQQEDAEFNKVLKNVCIKIM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NDDIKNNSDRIDVDGDIPNNLLFYIYGSLIEGFLYWIKDEKIDWPSEEIDKIFHKVINIK
HHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
IK
CC
>Mature Secondary Structure
MKETDLRVIKTKKALSSSLLQLLEQHLFQTITVNQICHNALVHRTTFYKHFYDKYDLLEY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFNQLTKAYFATDISDRLNHPFQTINDTINNKEDLQKVADFQQEDAEFNKVLKNVCIKIM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NDDIKNNSDRIDVDGDIPNNLLFYIYGSLIEGFLYWIKDEKIDWPSEEIDKIFHKVINIK
HHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
IK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA