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The map label for this gene is clpL

Identifier: 82752131

GI number: 82752131

Start: 2558644

End: 2560752

Strand: Direct

Name: clpL

Synonym: SAB2423

Alternate gene names: 82752131

Gene position: 2558644-2560752 (Clockwise)

Preceding gene: 82752128

Following gene: 82752135

Centisome position: 93.29

GC content: 35.99

Gene sequence:

>2109_bases
ATGAATAACAATTTTTTCAATAGTGACTTCGATTCTATTTTACGAAGAATGATGCAAGACATGCAAAACTCAAATCAGAC
TAGTAACAAGAAATACTATATTAATGGTAAAGAAGTTTCACAGGAAGAATTAGCACAATTTACGCAACAAGGTGGTAATC
ATTCTGCCGAACAAAGTGCGCAAGCTTTTCAACAAGCAGCACTAAGACAACAAGGTCAACAAAGTGGCAATGGCAATTAT
TTAGAACAAATTGGTCGTAACTTAACGCAAGAGGCTCGTGACGGATTATTAGATCCAGTCATCGGTCGTGATAAAGAAAT
CCAAGAAACTGCAGAAGTCTTAAGTAGACGCACTAAAAACAATCCTATCCTAGTCGGAGAAGCTGGAGTTGGTAAAACTG
CGATTGTCGAAGGTTTAGCGCAAGCAATCGTTGAAGGGAACGTACCTGCAGCAATCAAAGATAAAGAAATTATATCTATA
GATATTTCATCGCTTGAAGCTGGAACGCAATATCGTGGCGCCTTTGAAGAAAACATCCAAAAGTTAGTTGAAGGCGTTAA
ATCATCACAAAATGCTGTGCTCTTCTTTGACGAAATTCACCAAATCATCGGTTCCGGCGCAACAGGAAGTGATTCTGGTA
GTAAAGGGTTATCTGATATTTTAAAACCAGCATTAAGTCGTGGTGAAATTTCAATTATAGGTGCAACGACTCAAGATGAA
TATCGCAATAATATCCTGAAAGACGCTGCATTAACACGTCGTTTTAACGAGGTACTGGTTAACGAACCAAGCGCAAAAGA
TACGGTTGAAATTTTAAAAGGAATTCGCGAAAAATTTGAAACACACCATCAAGTCAAATTACCTGATGACGTATTAAAGG
CATGTGTAGACTTATCCATTCAATATATTCCACAACGCTTATTACCTGACAAAGCAATCGATGTATTAGATATTACAGCT
GCACATTTATCTGCACAAAGCCCTGCTATTGATAAAGTTGCGACTGAAAAACGTATTTCTGAATTGGAACATGATAAGCG
TAAAGCTGTAAGTGCTGAAGAATATAAAAAAGCAGATGACATTCAAAATGAAATTAAATCTCTACAAGATAAATTAGAAA
ACAGTAATGGTGAACATACTGCAGTAGCAACGGTGCATGATATTTCTGATACCATTCAACGATTAACTGGTATTCCTGTA
TCTCAAATGGATGCCAATGACATTGAACGTTTAAAAAATATTTCTAGTCGTTTAAGAAGTAAAATCATCGGTCAAGATAA
AGCTGTAGAAATGGTTTCTCGTGCCATTCGTCGTAATCGAGCTGGTTTTGATGATGGCAATCGTCCAATTGGTAGCTTCC
TATTTGTCGGTCCTACTGGTGTTGGTAAAACAGAGCTTGCCAAACAGTTAGCCATTGATTTATTTGGTAATAAAGAAGCA
CTGATTCGACTTGATATGAGTGAATATAGTGATACTACTGCTATTTCTAAAATGATTGGTACAACTGCTGGTTATGTCGG
TTATGACGATAATTCAAATACATTAACTGAAAAAGTACGACGCAATCCATATTCAGTCATTCTATTTGATGAAATTGAAA
AGGCTAATCCACAAATATTAACATTATTACTACAAGTGATGGATGATGGTAATTTAACAGATGGTCAAGGTAACGTCATC
AACTTTAAAAACACAATCATTATTTGTACGTCAAACGCTGGTTTTGGTAACGGTACAGACCAAGAATACGATGACATTAT
GCAAGAAATGAAAAAATTCTTCCGCCCTGAATTTCTTAACCGCTTCAACGGCATCGTTGAATTCTTACATTTAGATAAAG
ATGCATTACAAGATATCGTCAACTTATTATTAGACGATGTACAAGTTACATTAGATAAAAAAGGTATTACGATGAATGTC
TCTCAAGATGCAAAAGATTGGTTAATTGAAGAGGGATATGATGAAGAGTTAGGCGCACGCCCATTAAGACGCATTGTTGA
ACAACAAGTGCGTGACAAAATAACAGATTATTATTTAGATCATACAGACGTTAAACATGTGGATTTAGATATCGAAGACA
ACGAATTAGTCGTCAAAGGTAAATCATGA

Upstream 100 bases:

>100_bases
CTACAATGGTGGAAAATAGAATTGCCATTGTTTATAGTTTGCATATAGTTTCAATGTATTTTCTTTTACTTATTAGTTTA
AAAATTTAGAGGTGATGTTT

Downstream 100 bases:

>100_bases
TACTTTAACATATAGCGTATCAAAAAATGAGCATCAGGACGCCCTCGCCTGTGCTCATTTTTTAAATTATTTCCCAGGAA
AATGATTCGCTGTACGTTGT

Product: ATP-dependent proteinase chain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 702; Mature: 702

Protein sequence:

>702_residues
MNNNFFNSDFDSILRRMMQDMQNSNQTSNKKYYINGKEVSQEELAQFTQQGGNHSAEQSAQAFQQAALRQQGQQSGNGNY
LEQIGRNLTQEARDGLLDPVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISI
DISSLEAGTQYRGAFEENIQKLVEGVKSSQNAVLFFDEIHQIIGSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDE
YRNNILKDAALTRRFNEVLVNEPSAKDTVEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITA
AHLSAQSPAIDKVATEKRISELEHDKRKAVSAEEYKKADDIQNEIKSLQDKLENSNGEHTAVATVHDISDTIQRLTGIPV
SQMDANDIERLKNISSRLRSKIIGQDKAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEA
LIRLDMSEYSDTTAISKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVI
NFKNTIIICTSNAGFGNGTDQEYDDIMQEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMNV
SQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYLDHTDVKHVDLDIEDNELVVKGKS

Sequences:

>Translated_702_residues
MNNNFFNSDFDSILRRMMQDMQNSNQTSNKKYYINGKEVSQEELAQFTQQGGNHSAEQSAQAFQQAALRQQGQQSGNGNY
LEQIGRNLTQEARDGLLDPVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISI
DISSLEAGTQYRGAFEENIQKLVEGVKSSQNAVLFFDEIHQIIGSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDE
YRNNILKDAALTRRFNEVLVNEPSAKDTVEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITA
AHLSAQSPAIDKVATEKRISELEHDKRKAVSAEEYKKADDIQNEIKSLQDKLENSNGEHTAVATVHDISDTIQRLTGIPV
SQMDANDIERLKNISSRLRSKIIGQDKAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEA
LIRLDMSEYSDTTAISKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVI
NFKNTIIICTSNAGFGNGTDQEYDDIMQEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMNV
SQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYLDHTDVKHVDLDIEDNELVVKGKS
>Mature_702_residues
MNNNFFNSDFDSILRRMMQDMQNSNQTSNKKYYINGKEVSQEELAQFTQQGGNHSAEQSAQAFQQAALRQQGQQSGNGNY
LEQIGRNLTQEARDGLLDPVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISI
DISSLEAGTQYRGAFEENIQKLVEGVKSSQNAVLFFDEIHQIIGSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDE
YRNNILKDAALTRRFNEVLVNEPSAKDTVEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITA
AHLSAQSPAIDKVATEKRISELEHDKRKAVSAEEYKKADDIQNEIKSLQDKLENSNGEHTAVATVHDISDTIQRLTGIPV
SQMDANDIERLKNISSRLRSKIIGQDKAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEA
LIRLDMSEYSDTTAISKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVI
NFKNTIIICTSNAGFGNGTDQEYDDIMQEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMNV
SQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYLDHTDVKHVDLDIEDNELVVKGKS

Specific function: Required for the development of induced thermotolerance

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 UVR domain

Homologues:

Organism=Homo sapiens, GI13540606, Length=303, Percent_Identity=35.3135313531353, Blast_Score=163, Evalue=7e-40,
Organism=Escherichia coli, GI1788943, Length=697, Percent_Identity=40.0286944045911, Blast_Score=496, Evalue=1e-141,
Organism=Escherichia coli, GI1787109, Length=685, Percent_Identity=39.1240875912409, Blast_Score=485, Evalue=1e-138,
Organism=Saccharomyces cerevisiae, GI6320464, Length=696, Percent_Identity=39.5114942528736, Blast_Score=479, Evalue=1e-136,
Organism=Saccharomyces cerevisiae, GI6323002, Length=685, Percent_Identity=37.6642335766423, Blast_Score=450, Evalue=1e-127,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): CLPL_STAAB (Q2YWB1)

Other databases:

- EMBL:   AJ938182
- RefSeq:   YP_417872.1
- ProteinModelPortal:   Q2YWB1
- SMR:   Q2YWB1
- STRING:   Q2YWB1
- EnsemblBacteria:   EBSTAT00000013001
- GeneID:   3794834
- GenomeReviews:   AJ938182_GR
- KEGG:   sab:SAB2423
- NMPDR:   fig|273036.3.peg.2353
- eggNOG:   COG0542
- GeneTree:   EBGT00050000023658
- HOGENOM:   HBG413133
- OMA:   RVIEQQI
- ProtClustDB:   CLSK877125
- BioCyc:   SAUR273036:SAB2423-MONOMER
- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR001943
- PRINTS:   PR00300
- SMART:   SM00382

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small; PF02151 UVR

EC number: NA

Molecular weight: Translated: 78094; Mature: 78094

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00870 CLPAB_1; PS00871 CLPAB_2; PS50151 UVR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNFFNSDFDSILRRMMQDMQNSNQTSNKKYYINGKEVSQEELAQFTQQGGNHSAEQSA
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHH
QAFQQAALRQQGQQSGNGNYLEQIGRNLTQEARDGLLDPVIGRDKEIQETAEVLSRRTKN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC
NPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISIDISSLEAGTQYRGAFEENIQ
CCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCHHCCHHHHHHH
KLVEGVKSSQNAVLFFDEIHQIIGSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDE
HHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHH
YRNNILKDAALTRRFNEVLVNEPSAKDTVEILKGIREKFETHHQVKLPDDVLKACVDLSI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QYIPQRLLPDKAIDVLDITAAHLSAQSPAIDKVATEKRISELEHDKRKAVSAEEYKKADD
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IQNEIKSLQDKLENSNGEHTAVATVHDISDTIQRLTGIPVSQMDANDIERLKNISSRLRS
HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
KIIGQDKAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEA
HHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCE
LIRLDMSEYSDTTAISKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQIL
EEEEEHHHCCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHCCCCEEEEEECCCCCCHHHH
TLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGFGNGTDQEYDDIMQEMKKFFRPEFLN
HHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHHH
RFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMNVSQDAKDWLIEEGYDEELGAR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCEEECCCCHHHHHHCCCCCHHCCHH
PLRRIVEQQVRDKITDYYLDHTDVKHVDLDIEDNELVVKGKS
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCC
>Mature Secondary Structure
MNNNFFNSDFDSILRRMMQDMQNSNQTSNKKYYINGKEVSQEELAQFTQQGGNHSAEQSA
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHH
QAFQQAALRQQGQQSGNGNYLEQIGRNLTQEARDGLLDPVIGRDKEIQETAEVLSRRTKN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC
NPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISIDISSLEAGTQYRGAFEENIQ
CCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCHHCCHHHHHHH
KLVEGVKSSQNAVLFFDEIHQIIGSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDE
HHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHH
YRNNILKDAALTRRFNEVLVNEPSAKDTVEILKGIREKFETHHQVKLPDDVLKACVDLSI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QYIPQRLLPDKAIDVLDITAAHLSAQSPAIDKVATEKRISELEHDKRKAVSAEEYKKADD
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IQNEIKSLQDKLENSNGEHTAVATVHDISDTIQRLTGIPVSQMDANDIERLKNISSRLRS
HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
KIIGQDKAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEA
HHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCE
LIRLDMSEYSDTTAISKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQIL
EEEEEHHHCCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHCCCCEEEEEECCCCCCHHHH
TLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGFGNGTDQEYDDIMQEMKKFFRPEFLN
HHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHHH
RFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMNVSQDAKDWLIEEGYDEELGAR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCEEECCCCHHHHHHCCCCCHHCCHH
PLRRIVEQQVRDKITDYYLDHTDVKHVDLDIEDNELVVKGKS
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA