| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is gntK
Identifier: 82752087
GI number: 82752087
Start: 2513406
End: 2514959
Strand: Reverse
Name: gntK
Synonym: SAB2378c
Alternate gene names: 82752087
Gene position: 2514959-2513406 (Counterclockwise)
Preceding gene: 82752088
Following gene: 82752086
Centisome position: 91.7
GC content: 37.77
Gene sequence:
>1554_bases ATGAAATATATGATTGGTGTCGACATTGGAACGACGAGTACCAAGTCAGTCTTATATGATGAAAATGGAACTTTCATCAT GAAACATCAAATCGGCTATGATTTACACACACCAAACGTTGATGTCTCAGAAGAAAACCCAGATGAATTATTTGATGCGG TATTAATGACAATTAAATACATAATGAGGGAATCGAAAGTTAATCAAGATGATATTAAATTTGTGTCATTTAGTGCGCAA ATGCATAGCTTGATTGCGATGGATCAGCAACATCAAAGATTAACAAATAATATTACTTGGGCAGATAACCGCGCTGCAAA ATATGCAACAGTAATAAACGAAGTGCATGATGGCAATGCGATTTATCAGCGAACAGGTACGCCTATTCATCCTATGTCGC CATTAGCGAAGATTTTTTGGATGAAACATGAATGGCAAGATGTATTTCAACGTACTACTAAATTTGCAGATATTAAAACA TACATTTTCTATCATTTGTTTGATAGATATATCATTGATTATTCAATGGCTTCCGCAACAGGGATGTTTAATTTAGAAAC ATTAGATTGGGATGTTGGGGCATTAGAATTGCTTGGTATTTCCGAGGAAATGTTGCCGGAATTAGTGCCAACAACGTACG TGATGAAAGGCATGAAAGAACGTTATGCAACATTAATGGGGCTTAATGAAGATACACCGTTTGTTATTGGTGCGAGTGAT GGGGTCCTTTCTAATTTGGGTGTCAATAGTGTTGGTAAAGGAGAAGTTGCTGTCACAATCGGTACATCTGGGGCGATTCG TACTGTGATAGATAAACCACGTACTGATTACAAAGGTAGAATATTTTGTTATGTCTTAACAGAGGACCACTACGTCATTG GAGGCCCTGTAAATAATGGTGGTGTCGTATTGAGATGGTTGCGCGATGAGTTGTTAGCAAGTGAAGTTGAAACTGCGAAA CGTCTCGGTGTTGATCCTTATGATGTTTTAACTCAAATTGCAAAGCGTGTTAAACCAGGTGCAGATGGTTTAATATTCCA TCCCTATTTAGCTGGAGAACGTGCGCCGCTTTGGAACGCAAATGCAAGAGGTTCATTCTTCGGTTTAACTTTATCTCATA AAAAAGAACATATGATTCGCGCCGCATTAGAAGGTGTTCTTTACAATTTGTATACCGTCTATCTTGCGCTTATTGAAGTA ATGAATGAAACGCCTAAGATGATAAAAGCAACAGGTGGTTTTGCGAAAAGTGAAGTATGGCGTCAAATGATGTCAGATAT ATTTGACACAGAGTTAGTGGTTCCTGAAAGTTATGAAAGTTCATGCTTAGGTGCCTGCGTACTCGGACTTAAAGCTGTAG GTGACATTGAAGATTTTTCAATCGTTTCATCGATGGTCGGTGCCACAAACAATCATACGCCGATTGAAGAAAATGTCGCT GTTTACCAAGAGCTCGTATCCATTTTTATCAATTTAAGTCGTTCTTTAACAGAGAATTATGAACAAATTGCAGATTTTCA ACGCCAACATATGGCTGAAAATAAAACACAATAA
Upstream 100 bases:
>100_bases TCAAATTTTGAAAGAAGCGTTTCATTTAAATTTCGACGATGTTGGTAAAGATATTGAAGGATTTTGGTTGAATTAAAATG AAAAGAAAGAAGGATTTGTC
Downstream 100 bases:
>100_bases ATACGTCACTCAAGCATCTTAGATAAAGTTGTTGTGCCATGACTACTATATATTATGTGGAATATGTGCGCGACGACGGT GTTACATTCTATTGAAAAGA
Product: gluconokinase
Products: NA
Alternate protein names: Gluconate kinase [H]
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MKYMIGVDIGTTSTKSVLYDENGTFIMKHQIGYDLHTPNVDVSEENPDELFDAVLMTIKYIMRESKVNQDDIKFVSFSAQ MHSLIAMDQQHQRLTNNITWADNRAAKYATVINEVHDGNAIYQRTGTPIHPMSPLAKIFWMKHEWQDVFQRTTKFADIKT YIFYHLFDRYIIDYSMASATGMFNLETLDWDVGALELLGISEEMLPELVPTTYVMKGMKERYATLMGLNEDTPFVIGASD GVLSNLGVNSVGKGEVAVTIGTSGAIRTVIDKPRTDYKGRIFCYVLTEDHYVIGGPVNNGGVVLRWLRDELLASEVETAK RLGVDPYDVLTQIAKRVKPGADGLIFHPYLAGERAPLWNANARGSFFGLTLSHKKEHMIRAALEGVLYNLYTVYLALIEV MNETPKMIKATGGFAKSEVWRQMMSDIFDTELVVPESYESSCLGACVLGLKAVGDIEDFSIVSSMVGATNNHTPIEENVA VYQELVSIFINLSRSLTENYEQIADFQRQHMAENKTQ
Sequences:
>Translated_517_residues MKYMIGVDIGTTSTKSVLYDENGTFIMKHQIGYDLHTPNVDVSEENPDELFDAVLMTIKYIMRESKVNQDDIKFVSFSAQ MHSLIAMDQQHQRLTNNITWADNRAAKYATVINEVHDGNAIYQRTGTPIHPMSPLAKIFWMKHEWQDVFQRTTKFADIKT YIFYHLFDRYIIDYSMASATGMFNLETLDWDVGALELLGISEEMLPELVPTTYVMKGMKERYATLMGLNEDTPFVIGASD GVLSNLGVNSVGKGEVAVTIGTSGAIRTVIDKPRTDYKGRIFCYVLTEDHYVIGGPVNNGGVVLRWLRDELLASEVETAK RLGVDPYDVLTQIAKRVKPGADGLIFHPYLAGERAPLWNANARGSFFGLTLSHKKEHMIRAALEGVLYNLYTVYLALIEV MNETPKMIKATGGFAKSEVWRQMMSDIFDTELVVPESYESSCLGACVLGLKAVGDIEDFSIVSSMVGATNNHTPIEENVA VYQELVSIFINLSRSLTENYEQIADFQRQHMAENKTQ >Mature_517_residues MKYMIGVDIGTTSTKSVLYDENGTFIMKHQIGYDLHTPNVDVSEENPDELFDAVLMTIKYIMRESKVNQDDIKFVSFSAQ MHSLIAMDQQHQRLTNNITWADNRAAKYATVINEVHDGNAIYQRTGTPIHPMSPLAKIFWMKHEWQDVFQRTTKFADIKT YIFYHLFDRYIIDYSMASATGMFNLETLDWDVGALELLGISEEMLPELVPTTYVMKGMKERYATLMGLNEDTPFVIGASD GVLSNLGVNSVGKGEVAVTIGTSGAIRTVIDKPRTDYKGRIFCYVLTEDHYVIGGPVNNGGVVLRWLRDELLASEVETAK RLGVDPYDVLTQIAKRVKPGADGLIFHPYLAGERAPLWNANARGSFFGLTLSHKKEHMIRAALEGVLYNLYTVYLALIEV MNETPKMIKATGGFAKSEVWRQMMSDIFDTELVVPESYESSCLGACVLGLKAVGDIEDFSIVSSMVGATNNHTPIEENVA VYQELVSIFINLSRSLTENYEQIADFQRQHMAENKTQ
Specific function: Unknown
COG id: COG1070
COG function: function code G; Sugar (pentulose and hexulose) kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI42794763, Length=459, Percent_Identity=24.400871459695, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI189409120, Length=459, Percent_Identity=24.400871459695, Blast_Score=112, Evalue=9e-25, Organism=Homo sapiens, GI4504007, Length=459, Percent_Identity=24.400871459695, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI41393575, Length=448, Percent_Identity=22.9910714285714, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI88196792, Length=489, Percent_Identity=23.3128834355828, Blast_Score=101, Evalue=1e-21, Organism=Escherichia coli, GI1789987, Length=498, Percent_Identity=25.7028112449799, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI1787789, Length=503, Percent_Identity=25.0497017892644, Blast_Score=150, Evalue=3e-37, Organism=Escherichia coli, GI1790361, Length=465, Percent_Identity=26.4516129032258, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI1790005, Length=524, Percent_Identity=23.6641221374046, Blast_Score=128, Evalue=8e-31, Organism=Escherichia coli, GI1789168, Length=461, Percent_Identity=20.824295010846, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1789138, Length=516, Percent_Identity=23.062015503876, Blast_Score=97, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17535599, Length=468, Percent_Identity=24.7863247863248, Blast_Score=118, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6321755, Length=360, Percent_Identity=24.7222222222222, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI17864214, Length=487, Percent_Identity=24.2299794661191, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI24655555, Length=447, Percent_Identity=25.503355704698, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24655560, Length=447, Percent_Identity=25.503355704698, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24655570, Length=447, Percent_Identity=25.503355704698, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24655574, Length=447, Percent_Identity=25.503355704698, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24655565, Length=447, Percent_Identity=25.503355704698, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24656367, Length=507, Percent_Identity=22.6824457593688, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI21357867, Length=518, Percent_Identity=22.972972972973, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI24654573, Length=413, Percent_Identity=24.455205811138, Blast_Score=108, Evalue=9e-24, Organism=Drosophila melanogaster, GI24656372, Length=323, Percent_Identity=25.3869969040248, Blast_Score=90, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR006002 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 58112; Mature: 58112
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYMIGVDIGTTSTKSVLYDENGTFIMKHQIGYDLHTPNVDVSEENPDELFDAVLMTIKY CCEEEEEECCCCCCCEEEEECCCCEEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHH IMRESKVNQDDIKFVSFSAQMHSLIAMDQQHQRLTNNITWADNRAAKYATVINEVHDGNA HHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCE IYQRTGTPIHPMSPLAKIFWMKHEWQDVFQRTTKFADIKTYIFYHLFDRYIIDYSMASAT EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GMFNLETLDWDVGALELLGISEEMLPELVPTTYVMKGMKERYATLMGLNEDTPFVIGASD CCEEEEEECCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCC GVLSNLGVNSVGKGEVAVTIGTSGAIRTVIDKPRTDYKGRIFCYVLTEDHYVIGGPVNNG CHHHHCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCEEEEEEEECCCEEEECCCCCC GVVLRWLRDELLASEVETAKRLGVDPYDVLTQIAKRVKPGADGLIFHPYLAGERAPLWNA CEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCC NARGSFFGLTLSHKKEHMIRAALEGVLYNLYTVYLALIEVMNETPKMIKATGGFAKSEVW CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCHHHHHH RQMMSDIFDTELVVPESYESSCLGACVLGLKAVGDIEDFSIVSSMVGATNNHTPIEENVA HHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHH VYQELVSIFINLSRSLTENYEQIADFQRQHMAENKTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKYMIGVDIGTTSTKSVLYDENGTFIMKHQIGYDLHTPNVDVSEENPDELFDAVLMTIKY CCEEEEEECCCCCCCEEEEECCCCEEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHH IMRESKVNQDDIKFVSFSAQMHSLIAMDQQHQRLTNNITWADNRAAKYATVINEVHDGNA HHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCE IYQRTGTPIHPMSPLAKIFWMKHEWQDVFQRTTKFADIKTYIFYHLFDRYIIDYSMASAT EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GMFNLETLDWDVGALELLGISEEMLPELVPTTYVMKGMKERYATLMGLNEDTPFVIGASD CCEEEEEECCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCC GVLSNLGVNSVGKGEVAVTIGTSGAIRTVIDKPRTDYKGRIFCYVLTEDHYVIGGPVNNG CHHHHCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCEEEEEEEECCCEEEECCCCCC GVVLRWLRDELLASEVETAKRLGVDPYDVLTQIAKRVKPGADGLIFHPYLAGERAPLWNA CEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCC NARGSFFGLTLSHKKEHMIRAALEGVLYNLYTVYLALIEVMNETPKMIKATGGFAKSEVW CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCHHHHHH RQMMSDIFDTELVVPESYESSCLGACVLGLKAVGDIEDFSIVSSMVGATNNHTPIEENVA HHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHH VYQELVSIFINLSRSLTENYEQIADFQRQHMAENKTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3020045; 7584049; 9384377 [H]