| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is tcaA
Identifier: 82751951
GI number: 82751951
Start: 2364361
End: 2365743
Strand: Reverse
Name: tcaA
Synonym: SAB2235c
Alternate gene names: 82751951
Gene position: 2365743-2364361 (Counterclockwise)
Preceding gene: 82751952
Following gene: 82751950
Centisome position: 86.26
GC content: 31.74
Gene sequence:
>1383_bases ATGAAATCTTGCCCGAAGTGCGGACAACAAGCACAAGATGATGTACAGATATGTACACAATGTGGACATAAATTTGATAG TCGTCAAGCATTATATAGAAAGTCAACCGATGAAGATATACAAACTAATAACATCAAGATGAGAAAAATGGTGCCTTGGG CAATTGGTTTTTTCATTTTAATCTTAATTATTATATTGTTCTTTTTACTAAGAAACTTCAATTCACCTGAAGCGCAAACA AAAATATTAGTTAATGCGATTGAGAATAATGATAAACAAAAAGTAGCAACATTATTAAGTACTAAAGATAATAAAGTAGA TTCTGAAGAAGCGAAAGTATACATTAACTATATCAAAGATGAAGTTGGGCTTAAGCAATTTGTCAGCGACCTTAAAAATA CGGTACATAAATTGAATAAGAGTAAGACCAGCGTAGCTTCTTATATTCAAACCAGATCTGGTCAAAATATATTACGTGTA AGTAAAAATGGCACACGTTATATCTTTTTCGATAATATGAGCTTTACTGCACCTACCAAGCAACCAATTGTTAAACCGAA AGAAAAAACAAAATATGAGTTTAAATCTGGTGGTAAGAAAAAGATGGTTATAGCTGAAGCAAATAAAGTGACGCCAATAG GTAATTTTATACCGGGGACATATAGAATTCCAGCTATGAAATCAACTGAGAACGGTGATTTTGCAGGCCATTTAAAATTT GATTTTAGACAAAGTAATTCTGAAACGGTAGATGTTACTGAAGATTTTGAAGAAGCAAATATATCTGTAACTTTAAAAGG CGATACAAAATTAAATGATAGTTCTAAAAAAGTAACTATAAATGACCGTGAAATGGCATTTTCAAGTTCCAAAACGTATG GTCCATATCCACAAAATAAAGATATTACCATTTCAGCTTCAGGTAAAGCGAAAGGTAAAACATTTACAACACAGACGAAG ACGATTAAAGCCAGCGATTTAAAATACAGTACAGAAATAACTTTGAATTTTGACAGTGAAGATATCGAAGACTATGTTGA AAAAAAAGAAAAAGAAGAAAACAGCTTGAAGAACAAATTGATAGAATTCTTTGCTGGATATTCTTTAGCGAATAATGCTG CGTTTAATCAGTCGGATTTTGATTTTGTATCGTCATATATAAAAAAAGGATCATCTTTTTATGATGATGTAAAGAAGCGT GTATCTAAAGGAAGTTTAATGATGATTAGTTCACCACAAATTATAGATGCCGAAAAACATGGTGATAAGATTACCGCAAC CGTAAGACTAATAAATGAGAACGGTAAGCAAGTAGATAAAGAATATGAGCTTGAACAAGGTTCGCAAGACCGCTTGCAAT TAATCAAGACATCAGAAAAATAG
Upstream 100 bases:
>100_bases TTCTTGGGATAATATTTGTAAAATAATAATGGTAAAATAATAAAATAATTTTTGTGATATACATATAACAATTGAAGAGG AACAGAATTGAGGTGAAAGT
Downstream 100 bases:
>100_bases AGTATAAATCTTAAATAAGATGCATGTGTCATGGAATATAAACAACATCCTTTCAAAGTATTTACAATTAGTGTGAATTA CTTTGAAGGGATTGTTTTTT
Product: bicyclomycin and teicoplanin resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFILILIIILFFLLRNFNSPEAQT KILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNKDITISASGKAKGKTFTTQTK TIKASDLKYSTEITLNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKR VSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
Sequences:
>Translated_460_residues MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFILILIIILFFLLRNFNSPEAQT KILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNKDITISASGKAKGKTFTTQTK TIKASDLKYSTEITLNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKR VSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK >Mature_460_residues MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFILILIIILFFLLRNFNSPEAQT KILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNKDITISASGKAKGKTFTTQTK TIKASDLKYSTEITLNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKR VSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
Specific function: Unknown
COG id: COG4640
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tcaA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52049; Mature: 52049
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS01300 RECR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFIL CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHH ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD HHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHEEEEEHHHH EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCEECCCCC QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF CCCCCCCHHCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEE DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNK EEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECHHHHEECCCCCCCCCCCCC DITISASGKAKGKTFTTQTKTIKASDLKYSTEITLNFDSEDIEDYVEKKEKEENSLKNKL CEEEEECCCCCCCEEEEECCEEEECCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHH IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH HHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEEHHHC GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK CCEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHCCCC >Mature Secondary Structure MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFIL CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHH ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD HHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHEEEEEHHHH EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCEECCCCC QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF CCCCCCCHHCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEE DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNK EEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECHHHHEECCCCCCCCCCCCC DITISASGKAKGKTFTTQTKTIKASDLKYSTEITLNFDSEDIEDYVEKKEKEENSLKNKL CEEEEECCCCCCCEEEEECCEEEECCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHH IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH HHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEEHHHC GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK CCEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA