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The map label for this gene is yneJ [C]

Identifier: 82751925

GI number: 82751925

Start: 2340351

End: 2340992

Strand: Direct

Name: yneJ [C]

Synonym: SAB2209

Alternate gene names: 82751925

Gene position: 2340351-2340992 (Clockwise)

Preceding gene: 82751917

Following gene: 82751928

Centisome position: 85.34

GC content: 31.15

Gene sequence:

>642_bases
ATGTATGATTTAAGCGTTACATCAGAACCAAGGATAAAAATGGGGACTCTTGAATCTACGAATCAATGGATTGCGAATTT
AATTCGAAAGCACCATTCCGACTACCCTGAACAGCAATATCGTTTATATGAAATACATGATAAACATCAATCTATAGAGC
AATTACTGAATTTTAATATTCATTTAGCTATAACAAATGAAAAAATAACCCACGAAGATATAAGATCCATTCCTTTATAT
GAGGAATCTTACATTTTATTAGCACCTAAAGAAACATTTAAAAATCAAAATTGGGTAGATGTTGAAAATTTGCCACTCAT
ATTGCCAAACAAAAATTCTCAAGTGCGCAAACACTTAGATGACTATTTTAATAGAAGAAATATTCGTCCAAATGTCGTTG
TAGAAACAGATCGATTCGAATCAGCAGTTGGATTTGTTCATCTTGGCTTAGGTTACGCTATCATTCCGAGATTTTATTAC
CAATCATTTCACACGTCCAATTTAGAATATAAAAAAATTCGTCCAAACTTAGGCCGAAAAATTTATATCAATTATCATAA
AAAACGTAAACACTCCGAACAAGTACATACATTCGTACAACAATGTCAAGATTATTTATATGGACTTTTAGAGGCTCTTT
AA

Upstream 100 bases:

>100_bases
TTACACGTTCAACAAAAGACATCAAGATTACCGAAAAAGGAATACAGTTTTATCGTTATGCGAGCGAATTAGTTCAACAA
TATCGATCCACGATGGAAAA

Downstream 100 bases:

>100_bases
CTTAAGTAATTAGAGCCTCTTATGCAGTTGCTCAGTCAACTGTATAAGAATTTCACAACCAATTTTATGATTTCCATGTA
TAAATCATTACATTCAGACC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; HTH-Type Transcriptional Regulator; LysR Family Regulatory Protein

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MYDLSVTSEPRIKMGTLESTNQWIANLIRKHHSDYPEQQYRLYEIHDKHQSIEQLLNFNIHLAITNEKITHEDIRSIPLY
EESYILLAPKETFKNQNWVDVENLPLILPNKNSQVRKHLDDYFNRRNIRPNVVVETDRFESAVGFVHLGLGYAIIPRFYY
QSFHTSNLEYKKIRPNLGRKIYINYHKKRKHSEQVHTFVQQCQDYLYGLLEAL

Sequences:

>Translated_213_residues
MYDLSVTSEPRIKMGTLESTNQWIANLIRKHHSDYPEQQYRLYEIHDKHQSIEQLLNFNIHLAITNEKITHEDIRSIPLY
EESYILLAPKETFKNQNWVDVENLPLILPNKNSQVRKHLDDYFNRRNIRPNVVVETDRFESAVGFVHLGLGYAIIPRFYY
QSFHTSNLEYKKIRPNLGRKIYINYHKKRKHSEQVHTFVQQCQDYLYGLLEAL
>Mature_213_residues
MYDLSVTSEPRIKMGTLESTNQWIANLIRKHHSDYPEQQYRLYEIHDKHQSIEQLLNFNIHLAITNEKITHEDIRSIPLY
EESYILLAPKETFKNQNWVDVENLPLILPNKNSQVRKHLDDYFNRRNIRPNVVVETDRFESAVGFVHLGLGYAIIPRFYY
QSFHTSNLEYKKIRPNLGRKIYINYHKKRKHSEQVHTFVQQCQDYLYGLLEAL

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25531; Mature: 25531

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDLSVTSEPRIKMGTLESTNQWIANLIRKHHSDYPEQQYRLYEIHDKHQSIEQLLNFNI
CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCHHHHEEHHHHHHHHHHHHHHCCEE
HLAITNEKITHEDIRSIPLYEESYILLAPKETFKNQNWVDVENLPLILPNKNSQVRKHLD
EEEEECCCCCHHHHHCCCCCCCCEEEEECHHHHCCCCCEECCCCEEEECCCCHHHHHHHH
DYFNRRNIRPNVVVETDRFESAVGFVHLGLGYAIIPRFYYQSFHTSNLEYKKIRPNLGRK
HHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCE
IYINYHKKRKHSEQVHTFVQQCQDYLYGLLEAL
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MYDLSVTSEPRIKMGTLESTNQWIANLIRKHHSDYPEQQYRLYEIHDKHQSIEQLLNFNI
CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCHHHHEEHHHHHHHHHHHHHHCCEE
HLAITNEKITHEDIRSIPLYEESYILLAPKETFKNQNWVDVENLPLILPNKNSQVRKHLD
EEEEECCCCCHHHHHCCCCCCCCEEEEECHHHHCCCCCEECCCCEEEECCCCHHHHHHHH
DYFNRRNIRPNVVVETDRFESAVGFVHLGLGYAIIPRFYYQSFHTSNLEYKKIRPNLGRK
HHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCE
IYINYHKKRKHSEQVHTFVQQCQDYLYGLLEAL
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA