Click here to switch to the map view.

The map label for this gene is ybxG [H]

Identifier: 82751909

GI number: 82751909

Start: 2323655

End: 2325034

Strand: Reverse

Name: ybxG [H]

Synonym: SAB2193c

Alternate gene names: 82751909

Gene position: 2325034-2323655 (Counterclockwise)

Preceding gene: 82751912

Following gene: 82751906

Centisome position: 84.78

GC content: 34.06

Gene sequence:

>1380_bases
ATGGAGAACAATGAACTAAAAAGGGGATTGAGTGCCCGTCAAATTCAAATGATTGCACTTGGTGGTACGATTGGCGTGGG
GCTTTTCATGGGTGCGACAAGTACAATTAAATGGACGGGCCCATCAGTTATCCTTGCATATTTAATTGCGGGTATCTTTT
TATTTTTAATCATGAGAGCAATGGGGGAAATGATTTATTTAAACCCTACAACAGGATCATTTGCAACATTTGCAAGTGAT
TATATACATCCTGCAACAGGTTATATGACAGCATGGAGTAATATATTCCAATGGATTGTTGTTGGTATGAGTGAGGTCAT
CGCAGTAGGAGAATATATGAAGTTTTGGTTCCCGGAATTGCCAACTTGGATTCCTGGTATTATTGCTATTTTATTATTAA
TGGCAGCGAATTTATTCTCGGTAAAAGCGTTTGGAGAATTTGAATTTTGGTTTGCTTTAATTAAAGTTGTAACAATTATT
TTAATGATTATTGCTGGTTTTGGTCTTATTTTCTTTGGTTTTGGAAATGGTGGCCATGCGGTAGGTATTTCTAATCTATG
GACAAATGGCGGATTTATGCCAAATGGTATTGTTGGTTTCTTCTTTGCATTATCAATTGTAATTGGTTCATACCAAGGTG
TGGAACTGATAGGTATTACTGCAGGTGAAACTAAAGATCCTCAGAAAAATATCGTTAAAGCAGTGAATGGTGTTATCTGG
AGAATTTTAATTTTCTATTTAGGTGCTATTTTTGTTATTGTTTCAGTGTATCCTTGGAATCAATTAGGAGACATTGGAAG
TCCGTTTGTTGCAACATTTGCTAAAATCGGTATTACATTTGCAGCTGGATTAATTAACTTTGTTGTATTAACTGCAGCAA
TGTCAGGATGTAACTCAGGTATTTTCAGTGCGAGTCGTATGATTTATACACTTGCTCATAAAGGTGAAATGCCGAAAATA
TTTACTAAAATCATGAGAAATGGTGTACCATTGTACACTGTTGTTGCAGTATCTCTTGGTATTTTAATTGGTGCTTTATT
AAACGTAATTTTACCTTTATATATCGATGGAGCGAAGAGTATTTTCGTATACGTTTATAGTGCGTCTATTTTACCAGGTA
TGATTCCTTGGTTTATGATTTTATTCAGTCACTTACGTTTTAGAAAATTACACCCTGAAGAAGTGGAAGGTCACCCATTC
AAAATGCCTGGTGGCGCAGTAAGTAACTACTTAACAATATTATTCTTAATATTAGTATTGGTTGGTATGGTATTTAATGT
TGAAACTAGAATATCAGTGCTTATTGGCGTTATCTTCTTAACGATTGTAACGATTTATTATTTTATTAGATATAATAAAA
ATAATGTAAAAGCAAAATAG

Upstream 100 bases:

>100_bases
AAATATTAATGTACTAAAATCGATAATTTTATAGTATAATTACGGCAATAAGTTTTTTTATGGATTTATTTAGTATCAAT
CAGAGATGGGGTAAGAAGTT

Downstream 100 bases:

>100_bases
TATGATTATAATGTGCGCTTATTTTATGACAAACTTGGCCCTAGCTTATTAAAGTTAAATAGCCAAAGAAATGTTATGAG
TAGGCGCATTTTTTTATAAA

Product: amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MENNELKRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASD
YIHPATGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGIIAILLLMAANLFSVKAFGEFEFWFALIKVVTII
LMIIAGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIW
RILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKI
FTKIMRNGVPLYTVVAVSLGILIGALLNVILPLYIDGAKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEEVEGHPF
KMPGGAVSNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFIRYNKNNVKAK

Sequences:

>Translated_459_residues
MENNELKRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASD
YIHPATGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGIIAILLLMAANLFSVKAFGEFEFWFALIKVVTII
LMIIAGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIW
RILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKI
FTKIMRNGVPLYTVVAVSLGILIGALLNVILPLYIDGAKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEEVEGHPF
KMPGGAVSNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFIRYNKNNVKAK
>Mature_459_residues
MENNELKRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASD
YIHPATGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGIIAILLLMAANLFSVKAFGEFEFWFALIKVVTII
LMIIAGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIW
RILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKI
FTKIMRNGVPLYTVVAVSLGILIGALLNVILPLYIDGAKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEEVEGHPF
KMPGGAVSNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFIRYNKNNVKAK

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG1113

COG function: function code E; Gamma-aminobutyrate permease and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI4507047, Length=373, Percent_Identity=23.3243967828418, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI48994972, Length=463, Percent_Identity=58.5313174946004, Blast_Score=521, Evalue=1e-149,
Organism=Escherichia coli, GI1786602, Length=459, Percent_Identity=45.7516339869281, Blast_Score=377, Evalue=1e-106,
Organism=Escherichia coli, GI1790653, Length=434, Percent_Identity=41.0138248847926, Blast_Score=343, Evalue=1e-95,
Organism=Escherichia coli, GI1786302, Length=459, Percent_Identity=40.7407407407407, Blast_Score=340, Evalue=1e-94,
Organism=Escherichia coli, GI1786789, Length=434, Percent_Identity=41.705069124424, Blast_Score=332, Evalue=4e-92,
Organism=Escherichia coli, GI87081708, Length=462, Percent_Identity=35.4978354978355, Blast_Score=281, Evalue=7e-77,
Organism=Escherichia coli, GI87081915, Length=425, Percent_Identity=35.7647058823529, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1788480, Length=413, Percent_Identity=37.046004842615, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1789017, Length=456, Percent_Identity=35.7456140350877, Blast_Score=260, Evalue=1e-70,
Organism=Escherichia coli, GI87081869, Length=327, Percent_Identity=24.1590214067278, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87082023, Length=328, Percent_Identity=23.780487804878, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324061, Length=484, Percent_Identity=32.2314049586777, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6320772, Length=448, Percent_Identity=33.0357142857143, Blast_Score=196, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6324924, Length=415, Percent_Identity=31.3253012048193, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6324990, Length=470, Percent_Identity=30, Blast_Score=183, Evalue=6e-47,
Organism=Saccharomyces cerevisiae, GI6322892, Length=442, Percent_Identity=29.8642533936652, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6324059, Length=408, Percent_Identity=33.0882352941176, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6324553, Length=395, Percent_Identity=30.8860759493671, Blast_Score=166, Evalue=8e-42,
Organism=Saccharomyces cerevisiae, GI6319824, Length=444, Percent_Identity=29.0540540540541, Blast_Score=155, Evalue=9e-39,
Organism=Saccharomyces cerevisiae, GI6321629, Length=457, Percent_Identity=25.8205689277899, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6322967, Length=402, Percent_Identity=28.1094527363184, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6321053, Length=408, Percent_Identity=28.921568627451, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6319543, Length=435, Percent_Identity=26.6666666666667, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6320717, Length=447, Percent_Identity=26.6219239373602, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6319542, Length=442, Percent_Identity=27.8280542986425, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6320251, Length=439, Percent_Identity=27.7904328018223, Blast_Score=143, Evalue=6e-35,
Organism=Saccharomyces cerevisiae, GI6319608, Length=364, Percent_Identity=29.1208791208791, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6324981, Length=394, Percent_Identity=29.1878172588832, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6320364, Length=492, Percent_Identity=23.1707317073171, Blast_Score=73, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50369; Mature: 50369

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNELKRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRA
CCCCHHHCCCCHHHEEEEEECCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
MGEMIYLNPTTGSFATFASDYIHPATGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPEL
HCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PTWIPGIIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMIIAGFGLIFFGFGNGGHA
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCE
VGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIW
EEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
RILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSG
HHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IFSASRMIYTLAHKGEMPKIFTKIMRNGVPLYTVVAVSLGILIGALLNVILPLYIDGAKS
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IFVYVYSASILPGMIPWFMILFSHLRFRKLHPEEVEGHPFKMPGGAVSNYLTILFLILVL
EEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VGMVFNVETRISVLIGVIFLTIVTIYYFIRYNKNNVKAK
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MENNELKRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRA
CCCCHHHCCCCHHHEEEEEECCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
MGEMIYLNPTTGSFATFASDYIHPATGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPEL
HCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PTWIPGIIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMIIAGFGLIFFGFGNGGHA
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCE
VGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIW
EEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
RILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSG
HHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IFSASRMIYTLAHKGEMPKIFTKIMRNGVPLYTVVAVSLGILIGALLNVILPLYIDGAKS
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IFVYVYSASILPGMIPWFMILFSHLRFRKLHPEEVEGHPFKMPGGAVSNYLTILFLILVL
EEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VGMVFNVETRISVLIGVIFLTIVTIYYFIRYNKNNVKAK
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 9016963 [H]