| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82751889
Identifier: 82751889
GI number: 82751889
Start: 2303863
End: 2305056
Strand: Reverse
Name: 82751889
Synonym: SAB2173c
Alternate gene names: NA
Gene position: 2305056-2303863 (Counterclockwise)
Preceding gene: 82751890
Following gene: 82751886
Centisome position: 84.05
GC content: 35.68
Gene sequence:
>1194_bases ATGCCTGCAATTTTAATTATACTAGCGGTAGGAATTATAGTAGGCAGTTGGATGTTTTCTGGCACAGTGCCAGCCTTGAT TTATTATGGCTTAGATTTATTGAATCCAAGCTATTTTTTAATATCAGCCTTTTTTATAAGTGCTGTTACATCTGTAGCAA CTGGTACAGCATGGGGCTCTGCATCAACTGCAGGGATTGCACTTATTTCTATTGGTAATCAATTGGGGATTCCTCCAGGG ATGGCAGCAGGTGCTATTATAGCAGGGGCTGTGTTTGGCGATAAAATGTCACCATTATCAGATACAACTAATTTAGCGGC GCTTGTTACTAAAGTTAATATATTTAAACATATACATTCGATGATGTGGACGACGATACCTGCGTCAATCATAGGTTTAT TAGTATGGTTTATTGCTGGATTTCAATTTAAAGGGCATTCAAATGATAAACAGATCCAAACTTTGTTATCAGAGCTTGCA CAGATTTATCAAATTAACATATGGGTCTGGGTTCCCTTAATTGTGATCATTGTTTGTTTGCTATTTAAAATGGCTACAGT GCCAGCTATGCTAATATCAAGCTTTTCTGCCATTATAGTGGGGACTTTTAATCATCATTTCAAAATGACAGATGGTTTCA AAGCAACATTTAGTGGTTTTAACGACTCAATGATACATCAGTCTCATATTTCATCCAGTGTGAAAAGCTTGTTAGAACAG GGTGGTATGATGAGTATGACCCAAATATTAGTAACGATATTTTGCGGATATGCATTTGCAGGTATTGTAGAAAAAGCAGG ATGTTTAGAAGTCTTATTAACTACTATTTCTAAAGGCATCCATTCTGTAGGAAGTTTAATATGTATTACTGTTATTTGTT GTATTGCGCTTGTATTCGCTGCAGGTGTTGCTTCGATTGTAATTATTATGGTCGGTGTGTTAATGAAAGATTTGTTCGAA AAATACCAAGTCTCTCGTTCCGTTTTATCAAGAACACTTGAAGACTCAAGTACGATGGTCTTACCATTAATACCATGGGG AACATCAGGTATTTACTATACGAATCAACTTCATGTCTCTGTTGGAGAATTTTTCATATGGACAGTACCATGTTATTTAT GCGCAATTATAGCAATTATCTATGGTTTTACAGGGATAGGTATTAAAAAGTCATCGAATTCACGTTTAACTTAA
Upstream 100 bases:
>100_bases TTAATTATTGCCTCAGCATATGCCACATGGATTGCAAAACGTGTAGGCTTAACATGGCAAGATTTAGAAAAAGCGCATTG CAGAACGTTTAAATACTGCA
Downstream 100 bases:
>100_bases TGTGAGCGTGGAATATATATAATATGTTGAAACACTTTAATCATTTATAATTGTAGCGGTTATAATTTGAAAAGGTTTTA ACTTAGAATAAATATCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTSVATGTAWGSASTAGIALISIGNQLGIPPG MAAGAIIAGAVFGDKMSPLSDTTNLAALVTKVNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELA QIYQINIWVWVPLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNDSMIHQSHISSSVKSLLEQ GGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITVICCIALVFAAGVASIVIIMVGVLMKDLFE KYQVSRSVLSRTLEDSSTMVLPLIPWGTSGIYYTNQLHVSVGEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
Sequences:
>Translated_397_residues MPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTSVATGTAWGSASTAGIALISIGNQLGIPPG MAAGAIIAGAVFGDKMSPLSDTTNLAALVTKVNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELA QIYQINIWVWVPLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNDSMIHQSHISSSVKSLLEQ GGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITVICCIALVFAAGVASIVIIMVGVLMKDLFE KYQVSRSVLSRTLEDSSTMVLPLIPWGTSGIYYTNQLHVSVGEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT >Mature_396_residues PAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTSVATGTAWGSASTAGIALISIGNQLGIPPGM AAGAIIAGAVFGDKMSPLSDTTNLAALVTKVNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQ IYQINIWVWVPLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNDSMIHQSHISSSVKSLLEQG GMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITVICCIALVFAAGVASIVIIMVGVLMKDLFEK YQVSRSVLSRTLEDSSTMVLPLIPWGTSGIYYTNQLHVSVGEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
Specific function: Unknown
COG id: COG1757
COG function: function code C; Na+/H+ antiporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nhaC Na(+)/H(+) antiporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004770 - InterPro: IPR018461 [H]
Pfam domain/function: PF03553 Na_H_antiporter [H]
EC number: NA
Molecular weight: Translated: 42583; Mature: 42452
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTSVATGTAWGS CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC ASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTKVNIFKHIHS CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH MMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWVPLIVIIVCL HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNDSMIHQSHISSSVKSLLEQ HHHHHHHHHHHHHCCHHHEEECCCCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHC GGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITVICCIALVFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGIYYTNQLHVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEEEE VGEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC >Mature Secondary Structure PAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTSVATGTAWGS CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC ASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTKVNIFKHIHS CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH MMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWVPLIVIIVCL HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNDSMIHQSHISSSVKSLLEQ HHHHHHHHHHHHHCCHHHEEECCCCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHC GGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITVICCIALVFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGIYYTNQLHVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEEEE VGEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]