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The map label for this gene is yijO [C]

Identifier: 82751886

GI number: 82751886

Start: 2300047

End: 2302002

Strand: Reverse

Name: yijO [C]

Synonym: SAB2170c

Alternate gene names: 82751886

Gene position: 2302002-2300047 (Counterclockwise)

Preceding gene: 82751889

Following gene: 82751885

Centisome position: 83.94

GC content: 28.07

Gene sequence:

>1956_bases
ATGACAGATAATTATTCACTACATATTTTTAAAAGTATGAAAATGAGTAGTGTTAAGGAAGCAAACTTAAAAATTATATA
TTGGCTACAAGGTACAGGTGTAGTTTCAATCAATCTACAACAATATGATGTAAAAAGAAATGATGTCACCGTTATTATGT
TGAATGATTTATATCAGATTGATGGTCATGATGATAGTGTATGTTGTGTTGTTGAAGTAAGTGCAAAGACATTTTTGAAG
TTTATGAATGCAAACTATATGATGCGTGGCAAGATATTAACAAATGAGGTTGCTAGCACTTTTAGAATCTTGATTAAGTA
TTTAATCTACAGCAAAATTAAACAACAGCCTTATAATGCTAATGATAAGATTATTAATTACATGTGTGTTGAATTAATGT
CATTAAATACATACGATGATAGTCGTCATTTAGTAGCCGAAGAAGTGCACGATTATTTAACAAACAACCACCATAAAAAG
ATAAATAGGAAAGATGTCATTAATCAAGTTAGTATCACAAACAAAGCTTTAAGTGACATGTTTAAAGCGACACCTTATAG
TAATTTTATTCAATATTTAAATCATATTAGACTGGAGCATTGCTTAATTGATATTTTAACTTCTAAGAAGCCCATTGAAG
AAATCGCAAGTAGTCATGGTTTTAATCATTATTCTCGTTTTATACACCTCTTTAAAGAAACGTATGGTGACACTCCTAAA
TTAATTAGAAAAAGATATAGTCCAACATCTCATTCAATTAACCATTCCCAATTAGTTGAAATTGATAAAAATATAATTGA
ATTATTTGATGATACTAATCAAAGTTCTTCAAGTATGCGCGAGATTGATATACCTTTTGAGCCTACAAAAAGGAGTCAAA
TGTATCAACCTAAAAACATCTATATTAAAGGAAGTAATTTTTATTGGATGGATTACTATACTATTAAACAAATCATTCAA
AGATTAGGTGTTAATCCTGAAAACTTGCATATAATTGTTACATTCGATACAAGCAATGAGCTATCGATTGAACAAATGAC
TTTATTACTTCAAAAGATAGTGAATTACAATGTAAATGTAGTATTTCGTATTAAACATGAATATAAGGAATTGTTAACAA
GTACTGAAAGAGGCAAGATAGAAAAGCTAGTAGCTACAATTTTTAATATGACTTTTGAGAGTAATAGATGTAAGATTGCA
TTTTTAATTAACGACTTAAATACTACTGCAATTCAAAAACTGAAACGTTTAATAGATAATTATATAGGAGTATTTGAATT
AATATATCATCTGGAACCAAATGAGTTGAATACGCGCTATGATAAAGAAATTGATCATCTAATAGACTATTTTATCTTAC
CGCTAAGACAAATAGAACAGGTGTCTATTGCACGTTCTAAAATTATATGTGATGTAGATTTGATTAATGAGAATAATGAC
TTAAAAGAAAAAATCACAATTTCTGATATTAATAAGGTTACTGAACTTTTGACAAATTATACAAAATTTCGAGGACTTAT
TATGCACATGTCAATTATAAGTGAAGCGAGCAAAGAAATAAATTTGACTAGATTATCAATCTTCATTTTTATCATAAATA
TACTTAAACAATTACGAGGGATTGTTATTTATCAAAATGACACGATGATTGTAACGAAGTTCAAACATGAAGTACAATGT
GTCATTTGTTTGCCAGCCGCATTGTTAAATGAGAATTCAGACGCTATACGTTTATCGTGTAAGGGTCTTCAACAATTTAG
CCATGCTAAAACTAAACAAATTGTTTTAAGTATAGATAAAGATAATCATACTTCCGAAAATGGTGTACTTGTGAATGATA
TTATGCAACAACACAGTTATTGGAAAGCTAATTTTATAGAAAGAAATATTTATGATCATTCATTAATGGTCTCAAGCAAT
AGTATTGTTCATTTGAAATATCATCTTGAGATATAG

Upstream 100 bases:

>100_bases
ATGTGGCGATATAATTGGTAGTGAATATTAGATGTTGACAATTGATTTGAGAAAGACAAACAGGAGTAAATCAATATATT
TGTATATATGAGGATGTAAG

Downstream 100 bases:

>100_bases
GCATGGTTTAAGAGAGGTTTTAAAGATGTCTAAATTTAAAGTTAAGCGTTTAACTGCACACATACTAATGTTGAAAGTCA
TTAATGATATGTTGAAATAT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcription Regulator; AraC Family Transcriptional Regulator

Number of amino acids: Translated: 651; Mature: 650

Protein sequence:

>651_residues
MTDNYSLHIFKSMKMSSVKEANLKIIYWLQGTGVVSINLQQYDVKRNDVTVIMLNDLYQIDGHDDSVCCVVEVSAKTFLK
FMNANYMMRGKILTNEVASTFRILIKYLIYSKIKQQPYNANDKIINYMCVELMSLNTYDDSRHLVAEEVHDYLTNNHHKK
INRKDVINQVSITNKALSDMFKATPYSNFIQYLNHIRLEHCLIDILTSKKPIEEIASSHGFNHYSRFIHLFKETYGDTPK
LIRKRYSPTSHSINHSQLVEIDKNIIELFDDTNQSSSSMREIDIPFEPTKRSQMYQPKNIYIKGSNFYWMDYYTIKQIIQ
RLGVNPENLHIIVTFDTSNELSIEQMTLLLQKIVNYNVNVVFRIKHEYKELLTSTERGKIEKLVATIFNMTFESNRCKIA
FLINDLNTTAIQKLKRLIDNYIGVFELIYHLEPNELNTRYDKEIDHLIDYFILPLRQIEQVSIARSKIICDVDLINENND
LKEKITISDINKVTELLTNYTKFRGLIMHMSIISEASKEINLTRLSIFIFIINILKQLRGIVIYQNDTMIVTKFKHEVQC
VICLPAALLNENSDAIRLSCKGLQQFSHAKTKQIVLSIDKDNHTSENGVLVNDIMQQHSYWKANFIERNIYDHSLMVSSN
SIVHLKYHLEI

Sequences:

>Translated_651_residues
MTDNYSLHIFKSMKMSSVKEANLKIIYWLQGTGVVSINLQQYDVKRNDVTVIMLNDLYQIDGHDDSVCCVVEVSAKTFLK
FMNANYMMRGKILTNEVASTFRILIKYLIYSKIKQQPYNANDKIINYMCVELMSLNTYDDSRHLVAEEVHDYLTNNHHKK
INRKDVINQVSITNKALSDMFKATPYSNFIQYLNHIRLEHCLIDILTSKKPIEEIASSHGFNHYSRFIHLFKETYGDTPK
LIRKRYSPTSHSINHSQLVEIDKNIIELFDDTNQSSSSMREIDIPFEPTKRSQMYQPKNIYIKGSNFYWMDYYTIKQIIQ
RLGVNPENLHIIVTFDTSNELSIEQMTLLLQKIVNYNVNVVFRIKHEYKELLTSTERGKIEKLVATIFNMTFESNRCKIA
FLINDLNTTAIQKLKRLIDNYIGVFELIYHLEPNELNTRYDKEIDHLIDYFILPLRQIEQVSIARSKIICDVDLINENND
LKEKITISDINKVTELLTNYTKFRGLIMHMSIISEASKEINLTRLSIFIFIINILKQLRGIVIYQNDTMIVTKFKHEVQC
VICLPAALLNENSDAIRLSCKGLQQFSHAKTKQIVLSIDKDNHTSENGVLVNDIMQQHSYWKANFIERNIYDHSLMVSSN
SIVHLKYHLEI
>Mature_650_residues
TDNYSLHIFKSMKMSSVKEANLKIIYWLQGTGVVSINLQQYDVKRNDVTVIMLNDLYQIDGHDDSVCCVVEVSAKTFLKF
MNANYMMRGKILTNEVASTFRILIKYLIYSKIKQQPYNANDKIINYMCVELMSLNTYDDSRHLVAEEVHDYLTNNHHKKI
NRKDVINQVSITNKALSDMFKATPYSNFIQYLNHIRLEHCLIDILTSKKPIEEIASSHGFNHYSRFIHLFKETYGDTPKL
IRKRYSPTSHSINHSQLVEIDKNIIELFDDTNQSSSSMREIDIPFEPTKRSQMYQPKNIYIKGSNFYWMDYYTIKQIIQR
LGVNPENLHIIVTFDTSNELSIEQMTLLLQKIVNYNVNVVFRIKHEYKELLTSTERGKIEKLVATIFNMTFESNRCKIAF
LINDLNTTAIQKLKRLIDNYIGVFELIYHLEPNELNTRYDKEIDHLIDYFILPLRQIEQVSIARSKIICDVDLINENNDL
KEKITISDINKVTELLTNYTKFRGLIMHMSIISEASKEINLTRLSIFIFIINILKQLRGIVIYQNDTMIVTKFKHEVQCV
ICLPAALLNENSDAIRLSCKGLQQFSHAKTKQIVLSIDKDNHTSENGVLVNDIMQQHSYWKANFIERNIYDHSLMVSSNS
IVHLKYHLEI

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76131; Mature: 76000

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNYSLHIFKSMKMSSVKEANLKIIYWLQGTGVVSINLQQYDVKRNDVTVIMLNDLYQI
CCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCEEEEEEEEEECCCCCEEEEEEECEEEE
DGHDDSVCCVVEVSAKTFLKFMNANYMMRGKILTNEVASTFRILIKYLIYSKIKQQPYNA
CCCCCCEEEEEEECHHHHHHHHCCCEEEECEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NDKIINYMCVELMSLNTYDDSRHLVAEEVHDYLTNNHHKKINRKDVINQVSITNKALSDM
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
FKATPYSNFIQYLNHIRLEHCLIDILTSKKPIEEIASSHGFNHYSRFIHLFKETYGDTPK
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH
LIRKRYSPTSHSINHSQLVEIDKNIIELFDDTNQSSSSMREIDIPFEPTKRSQMYQPKNI
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCEE
YIKGSNFYWMDYYTIKQIIQRLGVNPENLHIIVTFDTSNELSIEQMTLLLQKIVNYNVNV
EEECCCEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEE
VFRIKHEYKELLTSTERGKIEKLVATIFNMTFESNRCKIAFLINDLNTTAIQKLKRLIDN
EEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHH
YIGVFELIYHLEPNELNTRYDKEIDHLIDYFILPLRQIEQVSIARSKIICDVDLINENND
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCC
LKEKITISDINKVTELLTNYTKFRGLIMHMSIISEASKEINLTRLSIFIFIINILKQLRG
CHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
IVIYQNDTMIVTKFKHEVQCVICLPAALLNENSDAIRLSCKGLQQFSHAKTKQIVLSIDK
EEEEECCEEEEEEECCCEEEEEEECHHHHCCCCCEEEEEEHHHHHHHCCCCEEEEEEEEC
DNHTSENGVLVNDIMQQHSYWKANFIERNIYDHSLMVSSNSIVHLKYHLEI
CCCCCCCCEEHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCEEEEEEEEEC
>Mature Secondary Structure 
TDNYSLHIFKSMKMSSVKEANLKIIYWLQGTGVVSINLQQYDVKRNDVTVIMLNDLYQI
CCCEEEEEEECCCCCCCCCCCEEEEEEEECCCEEEEEEEEEECCCCCEEEEEEECEEEE
DGHDDSVCCVVEVSAKTFLKFMNANYMMRGKILTNEVASTFRILIKYLIYSKIKQQPYNA
CCCCCCEEEEEEECHHHHHHHHCCCEEEECEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NDKIINYMCVELMSLNTYDDSRHLVAEEVHDYLTNNHHKKINRKDVINQVSITNKALSDM
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
FKATPYSNFIQYLNHIRLEHCLIDILTSKKPIEEIASSHGFNHYSRFIHLFKETYGDTPK
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH
LIRKRYSPTSHSINHSQLVEIDKNIIELFDDTNQSSSSMREIDIPFEPTKRSQMYQPKNI
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCEE
YIKGSNFYWMDYYTIKQIIQRLGVNPENLHIIVTFDTSNELSIEQMTLLLQKIVNYNVNV
EEECCCEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEE
VFRIKHEYKELLTSTERGKIEKLVATIFNMTFESNRCKIAFLINDLNTTAIQKLKRLIDN
EEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHH
YIGVFELIYHLEPNELNTRYDKEIDHLIDYFILPLRQIEQVSIARSKIICDVDLINENND
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCC
LKEKITISDINKVTELLTNYTKFRGLIMHMSIISEASKEINLTRLSIFIFIINILKQLRG
CHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
IVIYQNDTMIVTKFKHEVQCVICLPAALLNENSDAIRLSCKGLQQFSHAKTKQIVLSIDK
EEEEECCEEEEEEECCCEEEEEEECHHHHCCCCCEEEEEEHHHHHHHCCCCEEEEEEEEC
DNHTSENGVLVNDIMQQHSYWKANFIERNIYDHSLMVSSNSIVHLKYHLEI
CCCCCCCCEEHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA