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The map label for this gene is ureD

Identifier: 82751882

GI number: 82751882

Start: 2297088

End: 2297924

Strand: Direct

Name: ureD

Synonym: SAB2166

Alternate gene names: 82751882

Gene position: 2297088-2297924 (Clockwise)

Preceding gene: 82751881

Following gene: 82751887

Centisome position: 83.76

GC content: 30.82

Gene sequence:

>837_bases
ATGGATGAACAACAATGGACTGGGCAACTTGATTTAACAGTGTTTTTTGATGGCAACCGATCAGTATCAAGAGATATTTT
CTTTGAAAAAGCACTTAAAGTGATACGTCCAGTTTATCTAAATCAATCTACCATTCCTACATTTTATATAGTGAATGTAG
GTGGTGGTTATTTAGATGGAGATCGTTACCGTATGAATGTGAATATCGAAGATAACGCTAAAGTGACATTGACATCTCAA
GGTGCAACAAAAATATACAAGACACCTTCCAATCATGTTGAGCAGTATCAAACTTTTAATTTGAAAGATAACGCATATTT
AGAATATGTCGCTGATCCAATCATCGCATATGAAAATGCTAAATTTTATCAACACAATACGTTGAATCTCAATAATTCTA
GTTCATTATTTTATACTGATATTTTAACTCCTGGTTATTCAAAAACTGGCGAAGCCTTCAAGTATCAATATATGCATTTA
ATAAATGAAATTTATATTGAAGATGAGCTAGTCACATATGATAATTTATTATTGAATCCTAATAAACAATCGATCAATGA
AATAGGTTATATGGAACATTACTCTCATTATGGCTCTGCTTACTTCATACATGAAGATGTTAACCAAAAACTAATCGATT
CAGTTTATGAAACCATTAGTTCTTATAGCAATACATTCGATTGTCGTGTTGCTATTTCTCAATTGCCTACACATGGTTTT
GCAGTTAGAATTTTTGCTTATCGCACACAAATTATAGAGAAAATACTTGGAACCATCCAAAGCTATATCGCAGAAAATAT
TTATGATCGTAAACTTGATTTTCTAAGAAAATATTAA

Upstream 100 bases:

>100_bases
ATAAACGTCCATTTACTTTTACTAACTTAAAAACCGACGAAGGTTTGGATGAAGTTATCGATTGGATTAAACGCGACACT
TTACTCAAAGGATTATCATA

Downstream 100 bases:

>100_bases
AATAAAAAGACTAGTGTACCTTGTTTCAAGCTTAATAAGCTGAAATAAGGTATGGCTAGTCTTTAACTTTAATTAAAGCA
TCTTCAATATTTAAATTTTA

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MDEQQWTGQLDLTVFFDGNRSVSRDIFFEKALKVIRPVYLNQSTIPTFYIVNVGGGYLDGDRYRMNVNIEDNAKVTLTSQ
GATKIYKTPSNHVEQYQTFNLKDNAYLEYVADPIIAYENAKFYQHNTLNLNNSSSLFYTDILTPGYSKTGEAFKYQYMHL
INEIYIEDELVTYDNLLLNPNKQSINEIGYMEHYSHYGSAYFIHEDVNQKLIDSVYETISSYSNTFDCRVAISQLPTHGF
AVRIFAYRTQIIEKILGTIQSYIAENIYDRKLDFLRKY

Sequences:

>Translated_278_residues
MDEQQWTGQLDLTVFFDGNRSVSRDIFFEKALKVIRPVYLNQSTIPTFYIVNVGGGYLDGDRYRMNVNIEDNAKVTLTSQ
GATKIYKTPSNHVEQYQTFNLKDNAYLEYVADPIIAYENAKFYQHNTLNLNNSSSLFYTDILTPGYSKTGEAFKYQYMHL
INEIYIEDELVTYDNLLLNPNKQSINEIGYMEHYSHYGSAYFIHEDVNQKLIDSVYETISSYSNTFDCRVAISQLPTHGF
AVRIFAYRTQIIEKILGTIQSYIAENIYDRKLDFLRKY
>Mature_278_residues
MDEQQWTGQLDLTVFFDGNRSVSRDIFFEKALKVIRPVYLNQSTIPTFYIVNVGGGYLDGDRYRMNVNIEDNAKVTLTSQ
GATKIYKTPSNHVEQYQTFNLKDNAYLEYVADPIIAYENAKFYQHNTLNLNNSSSLFYTDILTPGYSKTGEAFKYQYMHL
INEIYIEDELVTYDNLLLNPNKQSINEIGYMEHYSHYGSAYFIHEDVNQKLIDSVYETISSYSNTFDCRVAISQLPTHGF
AVRIFAYRTQIIEKILGTIQSYIAENIYDRKLDFLRKY

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 32418; Mature: 32418

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEQQWTGQLDLTVFFDGNRSVSRDIFFEKALKVIRPVYLNQSTIPTFYIVNVGGGYLDG
CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEECC
DRYRMNVNIEDNAKVTLTSQGATKIYKTPSNHVEQYQTFNLKDNAYLEYVADPIIAYENA
CEEEEEEEECCCCEEEEEECCCEEEEECCCHHHHHHEEECCCCCCHHHHHHCCEEEECCC
KFYQHNTLNLNNSSSLFYTDILTPGYSKTGEAFKYQYMHLINEIYIEDELVTYDNLLLNP
EEEECCEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCEEECC
NKQSINEIGYMEHYSHYGSAYFIHEDVNQKLIDSVYETISSYSNTFDCRVAISQLPTHGF
CHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCE
AVRIFAYRTQIIEKILGTIQSYIAENIYDRKLDFLRKY
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDEQQWTGQLDLTVFFDGNRSVSRDIFFEKALKVIRPVYLNQSTIPTFYIVNVGGGYLDG
CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEECC
DRYRMNVNIEDNAKVTLTSQGATKIYKTPSNHVEQYQTFNLKDNAYLEYVADPIIAYENA
CEEEEEEEECCCCEEEEEECCCEEEEECCCHHHHHHEEECCCCCCHHHHHHCCEEEECCC
KFYQHNTLNLNNSSSLFYTDILTPGYSKTGEAFKYQYMHLINEIYIEDELVTYDNLLLNP
EEEECCEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCEEECC
NKQSINEIGYMEHYSHYGSAYFIHEDVNQKLIDSVYETISSYSNTFDCRVAISQLPTHGF
CHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCE
AVRIFAYRTQIIEKILGTIQSYIAENIYDRKLDFLRKY
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA