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The map label for this gene is yfmE [H]

Identifier: 82751773

GI number: 82751773

Start: 2201838

End: 2202806

Strand: Reverse

Name: yfmE [H]

Synonym: SAB2056c

Alternate gene names: 82751773

Gene position: 2202806-2201838 (Counterclockwise)

Preceding gene: 82751774

Following gene: 82751772

Centisome position: 80.32

GC content: 33.33

Gene sequence:

>969_bases
ATGATGACAACGAAAATTATACGTCGTTATAGTTTAATCACAATCCTTTTAATTGTGAGTATATTCATAAGTTTATGTGT
AGGGTCTGTCATGATTCATCCGATTGATGCTATTAAGGGAATCTTTACACAAGATGATTTTATTTTAAATGAGTATCGTA
TACCTAGAACATTACTTGGTATTATTATCGGTAGTAGCTTGGGTATATCAGGTGCAATTATACAAGCTGTAATAAGAAAC
CCGTTAGCCTCACCTGATGTTATAGGTATTTCTAAAGGTGCCAGTTTAGCTGCTGTGATTATTATTATGATCTTTCCAAC
AGCACCATTGTTTGTGTTACCTATAGGTTCATTCTTAGGTGCCTTTGCAGTAAGTTTATTTTTATCATTTTTAATTTCAA
AATATGATGTTAAAGGTTCAAAGCTTGCCTTAATTGGTTTAGCAATAGGCGCAATATGTACGGCGATTGTGCAGTTCTTA
TTAATCAGAAATCCACTGGAAGCAAACAAAGCGCTTGTTTGGTTGACAGGTAGTCTATATGGTCATGATATGTCGAATAT
TTATACTATATTACCTTGGTTTTTAATAACGATACCAATCATCATTTTATTGAGTTATCAATTAGATGTATTGAATCTAG
GTGATGCTGTTGCAACCGCACTCGGTTTAAAAGTTAAAACTATTAAAATGATATTGCTAATTTTAGCAGTAATATTAGCT
GGATCCGCAATTTCAGTTGTCGGTGGTATTAGCTTTTTAGGATTAATTGCACCTCATATTGCGAGACAATTAATAGGAAA
TAAAACATTACACGTTATTATTATGTCGGGGTTAATTGGTGCTATATTGTTAACATTTGGAGATGGTTTAACCCGTGGCA
TTCATCCGCCACTGGATATTCCTGTAGGGGTTATCATTGCAATTATCGGTGCACCATACTTCTTAATATTATTACGAAGA
ATGAAATAA

Upstream 100 bases:

>100_bases
GTTTGATTACATATCCTTATGAATCACCAGTAGGGATTGTTACATCATTCGTAGGTGCACTTTACTTCTTATTTATAACG
ATTAAAGGGGTGAAAAGAAT

Downstream 100 bases:

>100_bases
CTAACATATGATTAGAGTTAAAAAAGGTTAAGTACGAAATCAGTAATTGTACTTAACCTTTTTTGAATTCACCTTGAAAA
ATTACAAGAAATAGCGTATA

Product: ferrichrome ABC transporter

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: Ferric-citrate import system permease protein [H]

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MMTTKIIRRYSLITILLIVSIFISLCVGSVMIHPIDAIKGIFTQDDFILNEYRIPRTLLGIIIGSSLGISGAIIQAVIRN
PLASPDVIGISKGASLAAVIIIMIFPTAPLFVLPIGSFLGAFAVSLFLSFLISKYDVKGSKLALIGLAIGAICTAIVQFL
LIRNPLEANKALVWLTGSLYGHDMSNIYTILPWFLITIPIIILLSYQLDVLNLGDAVATALGLKVKTIKMILLILAVILA
GSAISVVGGISFLGLIAPHIARQLIGNKTLHVIIMSGLIGAILLTFGDGLTRGIHPPLDIPVGVIIAIIGAPYFLILLRR
MK

Sequences:

>Translated_322_residues
MMTTKIIRRYSLITILLIVSIFISLCVGSVMIHPIDAIKGIFTQDDFILNEYRIPRTLLGIIIGSSLGISGAIIQAVIRN
PLASPDVIGISKGASLAAVIIIMIFPTAPLFVLPIGSFLGAFAVSLFLSFLISKYDVKGSKLALIGLAIGAICTAIVQFL
LIRNPLEANKALVWLTGSLYGHDMSNIYTILPWFLITIPIIILLSYQLDVLNLGDAVATALGLKVKTIKMILLILAVILA
GSAISVVGGISFLGLIAPHIARQLIGNKTLHVIIMSGLIGAILLTFGDGLTRGIHPPLDIPVGVIIAIIGAPYFLILLRR
MK
>Mature_322_residues
MMTTKIIRRYSLITILLIVSIFISLCVGSVMIHPIDAIKGIFTQDDFILNEYRIPRTLLGIIIGSSLGISGAIIQAVIRN
PLASPDVIGISKGASLAAVIIIMIFPTAPLFVLPIGSFLGAFAVSLFLSFLISKYDVKGSKLALIGLAIGAICTAIVQFL
LIRNPLEANKALVWLTGSLYGHDMSNIYTILPWFLITIPIIILLSYQLDVLNLGDAVATALGLKVKTIKMILLILAVILA
GSAISVVGGISFLGLIAPHIARQLIGNKTLHVIIMSGLIGAILLTFGDGLTRGIHPPLDIPVGVIIAIIGAPYFLILLRR
MK

Specific function: Part of the ABC transporter complex yfmCDEF involved in citrate-dependent Fe(3+) import. Involved in the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=279, Percent_Identity=41.2186379928315, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1790741, Length=326, Percent_Identity=30.3680981595092, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1786347, Length=309, Percent_Identity=32.0388349514563, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1786804, Length=322, Percent_Identity=31.3664596273292, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1786805, Length=295, Percent_Identity=34.9152542372881, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788004, Length=301, Percent_Identity=29.2358803986711, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34377; Mature: 34377

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTTKIIRRYSLITILLIVSIFISLCVGSVMIHPIDAIKGIFTQDDFILNEYRIPRTLLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHH
IIIGSSLGISGAIIQAVIRNPLASPDVIGISKGASLAAVIIIMIFPTAPLFVLPIGSFLG
HHHHCCCCCHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
AFAVSLFLSFLISKYDVKGSKLALIGLAIGAICTAIVQFLLIRNPLEANKALVWLTGSLY
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
GHDMSNIYTILPWFLITIPIIILLSYQLDVLNLGDAVATALGLKVKTIKMILLILAVILA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHC
GSAISVVGGISFLGLIAPHIARQLIGNKTLHVIIMSGLIGAILLTFGDGLTRGIHPPLDI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC
PVGVIIAIIGAPYFLILLRRMK
CHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMTTKIIRRYSLITILLIVSIFISLCVGSVMIHPIDAIKGIFTQDDFILNEYRIPRTLLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHH
IIIGSSLGISGAIIQAVIRNPLASPDVIGISKGASLAAVIIIMIFPTAPLFVLPIGSFLG
HHHHCCCCCHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
AFAVSLFLSFLISKYDVKGSKLALIGLAIGAICTAIVQFLLIRNPLEANKALVWLTGSLY
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
GHDMSNIYTILPWFLITIPIIILLSYQLDVLNLGDAVATALGLKVKTIKMILLILAVILA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHC
GSAISVVGGISFLGLIAPHIARQLIGNKTLHVIIMSGLIGAILLTFGDGLTRGIHPPLDI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC
PVGVIIAIIGAPYFLILLRRMK
CHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]