| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is ylmA [H]
Identifier: 82751750
GI number: 82751750
Start: 2164991
End: 2165773
Strand: Reverse
Name: ylmA [H]
Synonym: SAB2033c
Alternate gene names: 82751750
Gene position: 2165773-2164991 (Counterclockwise)
Preceding gene: 82751751
Following gene: 82751749
Centisome position: 78.97
GC content: 34.74
Gene sequence:
>783_bases ATGTTAATTCAATTAGATCAAGTTGGGCGAATGAAGCAAGGAAAAACAATTTTAAAAAATATTTCTTGGCAAATTAATGG AGGTGACAAATGGATTCTATATGGTTTAAATGGTGCTGGTAAGACAACGCTATTAAATATATTAAATGCATATGAGCCTG CGACAAATGGCGGTGTTAATCTATTTGGTAAAATGCCGAGCAAGGTAGGGTATTCTGCAGAGACTGTACGACAACATATA GGTTTTGTATCTCATAGTTTACTGGAAAAGTTTCAAGAGGGTGAAAGAGTAATCGATGTGGTGATAAGCGGTGCTTTTAA ATCAATTGGTGTTTATCAAGATATTGATGATGAGGTACGTAATGAAGCACATCAATTACTTAAATTAGTTGGAATGTCTG CTAAAGCGCAACAATATATTGGTTATTTATCTACAGGTGAAAAACAACGAGTGATGATTGCGCGAGCTTTAATGGGGCAA CCCCAGGTTTTAATTTTAGATGAGCCAGTAGCTGGTTTAGACTTTATTGCACGAGAATCGTTGTTAAGTATACTTGACTC ATTATCAGATTCATATCCAACGCTTGCGATGATTTATGTGACGCACTTTATTGAAGAAATTACTGGAAACTTTACTAAAA TTTTGCTATTAAAAGATGGGGAAAGTGTACAACAAGGGTTAATAGATGATATTTTGACATCTGAAAACATGTCTCATTTC TTCCGGAAAAAAGTAGCAGTTCAAAGATGGAATAATCGATTTTCTATGGCGATGTTAGAGTAA
Upstream 100 bases:
>100_bases AATGAAGTAGTTTATTTATTTAAATAGTCTGACAATTAAGGGTGTTATGTTAATATGATTTTATGAGAAGTATGGAGAAG CAATAAAGGGGTGACCTCGC
Downstream 100 bases:
>100_bases ATATTTTGCAAATACTAACTAATAATGACAAAATTTAATTAAGCTAAAATTGACAGTGGAGGGCAATATGGATAACGTAA AAGCAATATTTTTGGACATG
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MLIQLDQVGRMKQGKTILKNISWQINGGDKWILYGLNGAGKTTLLNILNAYEPATNGGVNLFGKMPSKVGYSAETVRQHI GFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEVRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQ PQVLILDEPVAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLKDGESVQQGLIDDILTSENMSHF FRKKVAVQRWNNRFSMAMLE
Sequences:
>Translated_260_residues MLIQLDQVGRMKQGKTILKNISWQINGGDKWILYGLNGAGKTTLLNILNAYEPATNGGVNLFGKMPSKVGYSAETVRQHI GFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEVRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQ PQVLILDEPVAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLKDGESVQQGLIDDILTSENMSHF FRKKVAVQRWNNRFSMAMLE >Mature_260_residues MLIQLDQVGRMKQGKTILKNISWQINGGDKWILYGLNGAGKTTLLNILNAYEPATNGGVNLFGKMPSKVGYSAETVRQHI GFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEVRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQ PQVLILDEPVAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLKDGESVQQGLIDDILTSENMSHF FRKKVAVQRWNNRFSMAMLE
Specific function: Involved In The Transport Of Molybdenum Into The Cell. Involved In Photorepair. Could Act On Uv-Induced DNA Damage Other Than Pyrimidine Dimers. [C]
COG id: COG1119
COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI153792144, Length=191, Percent_Identity=31.413612565445, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI27881501, Length=219, Percent_Identity=27.8538812785388, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI30795238, Length=219, Percent_Identity=27.8538812785388, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI46592915, Length=225, Percent_Identity=26.2222222222222, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI46592971, Length=225, Percent_Identity=26.2222222222222, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI46592964, Length=225, Percent_Identity=26.2222222222222, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI27477115, Length=190, Percent_Identity=30.5263157894737, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI46592956, Length=225, Percent_Identity=26.2222222222222, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI46592978, Length=225, Percent_Identity=26.2222222222222, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI46592898, Length=225, Percent_Identity=26.2222222222222, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI31657092, Length=190, Percent_Identity=27.8947368421053, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI27262624, Length=197, Percent_Identity=27.9187817258883, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI27262626, Length=197, Percent_Identity=27.9187817258883, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI116734710, Length=220, Percent_Identity=26.8181818181818, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI9955968, Length=225, Percent_Identity=28.4444444444444, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI9955966, Length=219, Percent_Identity=28.7671232876712, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI45243524, Length=219, Percent_Identity=28.7671232876712, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI27436953, Length=191, Percent_Identity=27.7486910994764, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI105990541, Length=211, Percent_Identity=26.0663507109005, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI45446740, Length=174, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI47078218, Length=174, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI150417984, Length=191, Percent_Identity=29.3193717277487, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI215820660, Length=223, Percent_Identity=23.3183856502242, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI20143975, Length=223, Percent_Identity=23.3183856502242, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI4505771, Length=232, Percent_Identity=27.5862068965517, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI9961252, Length=232, Percent_Identity=27.5862068965517, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1786975, Length=209, Percent_Identity=34.4497607655502, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1786563, Length=207, Percent_Identity=32.3671497584541, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1786319, Length=211, Percent_Identity=34.1232227488152, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI87081834, Length=228, Percent_Identity=31.5789473684211, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787089, Length=253, Percent_Identity=28.8537549407115, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787105, Length=211, Percent_Identity=31.7535545023697, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1786398, Length=221, Percent_Identity=28.9592760180996, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1787029, Length=230, Percent_Identity=27.8260869565217, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1788225, Length=227, Percent_Identity=29.5154185022026, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1788761, Length=235, Percent_Identity=30.6382978723404, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786345, Length=228, Percent_Identity=27.6315789473684, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787370, Length=234, Percent_Identity=26.0683760683761, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789873, Length=212, Percent_Identity=29.2452830188679, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789672, Length=232, Percent_Identity=26.2931034482759, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787712, Length=204, Percent_Identity=29.9019607843137, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786703, Length=219, Percent_Identity=30.1369863013699, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1790544, Length=255, Percent_Identity=27.0588235294118, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789032, Length=230, Percent_Identity=29.1304347826087, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=28.3261802575107, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1788506, Length=238, Percent_Identity=26.890756302521, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI87081709, Length=233, Percent_Identity=26.1802575107296, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1788897, Length=217, Percent_Identity=29.0322580645161, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789891, Length=223, Percent_Identity=24.6636771300448, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786872, Length=198, Percent_Identity=26.7676767676768, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1789593, Length=232, Percent_Identity=25.4310344827586, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787547, Length=227, Percent_Identity=28.1938325991189, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790525, Length=222, Percent_Identity=27.027027027027, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786654, Length=243, Percent_Identity=26.7489711934156, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788450, Length=242, Percent_Identity=25.2066115702479, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789991, Length=207, Percent_Identity=27.536231884058, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1788644, Length=229, Percent_Identity=28.82096069869, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1786253, Length=218, Percent_Identity=24.7706422018349, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1786803, Length=228, Percent_Identity=26.3157894736842, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI48995001, Length=216, Percent_Identity=27.3148148148148, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1790467, Length=226, Percent_Identity=27.8761061946903, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1789864, Length=227, Percent_Identity=24.6696035242291, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1786981, Length=236, Percent_Identity=27.5423728813559, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1787164, Length=209, Percent_Identity=29.1866028708134, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789962, Length=238, Percent_Identity=24.7899159663866, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI145693107, Length=272, Percent_Identity=26.1029411764706, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI87081782, Length=216, Percent_Identity=27.3148148148148, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI87082268, Length=182, Percent_Identity=29.1208791208791, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1788210, Length=223, Percent_Identity=28.6995515695067, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI48994943, Length=229, Percent_Identity=24.0174672489083, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787112, Length=242, Percent_Identity=25.2066115702479, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1788472, Length=220, Percent_Identity=24.0909090909091, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI48994883, Length=239, Percent_Identity=23.8493723849372, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1790190, Length=225, Percent_Identity=24.8888888888889, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1787113, Length=230, Percent_Identity=26.0869565217391, Blast_Score=61, Evalue=7e-11, Organism=Escherichia coli, GI1787182, Length=223, Percent_Identity=25.5605381165919, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17569143, Length=228, Percent_Identity=29.8245614035088, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17569145, Length=224, Percent_Identity=30.3571428571429, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI193209708, Length=228, Percent_Identity=27.1929824561404, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193202349, Length=236, Percent_Identity=29.2372881355932, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI212646699, Length=232, Percent_Identity=25, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI86563255, Length=243, Percent_Identity=27.1604938271605, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193211017, Length=224, Percent_Identity=28.125, Blast_Score=64, Evalue=8e-11, Organism=Caenorhabditis elegans, GI193211015, Length=224, Percent_Identity=28.125, Blast_Score=64, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6320266, Length=231, Percent_Identity=25.5411255411255, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324985, Length=243, Percent_Identity=27.5720164609054, Blast_Score=72, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6321081, Length=246, Percent_Identity=25.2032520325203, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24582014, Length=198, Percent_Identity=30.3030303030303, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24582012, Length=198, Percent_Identity=30.3030303030303, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI28574150, Length=213, Percent_Identity=28.6384976525822, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI116007328, Length=213, Percent_Identity=28.6384976525822, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI281363262, Length=222, Percent_Identity=29.7297297297297, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24653245, Length=222, Percent_Identity=29.7297297297297, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI116007184, Length=243, Percent_Identity=26.7489711934156, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI221500365, Length=243, Percent_Identity=26.7489711934156, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24659289, Length=217, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24643674, Length=226, Percent_Identity=26.9911504424779, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI19920532, Length=223, Percent_Identity=27.8026905829596, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24580930, Length=223, Percent_Identity=27.8026905829596, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI23397593, Length=241, Percent_Identity=30.7053941908714, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28574744, Length=178, Percent_Identity=29.7752808988764, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI85725262, Length=201, Percent_Identity=30.8457711442786, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI17647959, Length=235, Percent_Identity=27.2340425531915, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24650853, Length=199, Percent_Identity=27.6381909547739, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI24650855, Length=199, Percent_Identity=27.6381909547739, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 29029; Mature: 29029
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIQLDQVGRMKQGKTILKNISWQINGGDKWILYGLNGAGKTTLLNILNAYEPATNGGVN CEEECCHHCCHHCCHHHHHHCCEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCE LFGKMPSKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEVR EEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH NEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPVAGLDFIARES HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH LLSILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLKDGESVQQGLIDDILTSENMSHF HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH FRKKVAVQRWNNRFSMAMLE HHHHHHHHHHCCCCEEEECC >Mature Secondary Structure MLIQLDQVGRMKQGKTILKNISWQINGGDKWILYGLNGAGKTTLLNILNAYEPATNGGVN CEEECCHHCCHHCCHHHHHHCCEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCE LFGKMPSKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEVR EEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH NEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPVAGLDFIARES HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH LLSILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLKDGESVQQGLIDDILTSENMSHF HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH FRKKVAVQRWNNRFSMAMLE HHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]