| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is czrB
Identifier: 82751747
GI number: 82751747
Start: 2161215
End: 2162195
Strand: Direct
Name: czrB
Synonym: SAB2030
Alternate gene names: 82751747
Gene position: 2161215-2162195 (Clockwise)
Preceding gene: 82751746
Following gene: 82751748
Centisome position: 78.8
GC content: 33.33
Gene sequence:
>981_bases ATGTCTCATTCACATCATCATCATGACCATATGCATAGTCATGTAACTACAAATAATAAGAAAGTATTGTTTATATCGTT TTTAATAATCGGTCTATATATGTTTATCGAAATCATCGGCGGTCTCCTTGCTAATAGTTTGGCATTATTATCTGACGGTA TCCATATGTTTAGCGACACATTCTCATTAGGTGTTGCTTTAATCGCATTTATATATGCTGAAAAGAACGCCATAGCTACG AAAACATTTGGTTATAAACGTTTCGAAGTACTCGCAGCGTTATTTAATGGTGTAACGCTTTTTGTAATAAGTATTTTGAT TGTTTTTGAAGCGATTAAACGCTTCTTTGTTCCTTCTGAAGTTCAATCAAAAGAAATGTTAATCATTAGCATTATTGGTT TAATTGTCAATATCGTTGTTGCATTCTTTATGTTTAAAGGCGGCGACACGTCACACAATTTAAATATGCGTGGTGCTTTT CTACATGTTATCGGAGACTTATTAGGTTCAGTTGGCGCCATTACTGCAGCTATTTTAATTTGGGCATTTGGATGGACAAT CGCCGATCCTATCGCAAGTATTTTAGTTTCCGTTATTATTTTAAAAAGTGCTTGGGGTATCACAAAATCTTCAATTAACA TTTTAATGGAAGGCACACCAAGTGATGTTGATATAGATGAAGTTATAACTACTATTAAAAAGGATTCACGAATACAAAGT GTGCATGATTGCCATGTTTGGACAATTTCAAATGATATGAATGCATTAAGTTGTCATGTTGTTGTAGACCATACATTGAC AATGAAAGAATGTGAATTATTATTAGAAAACATCGAGCATGATTTATTACATTTAAATATCCACCATATGACTATTCAAT TAGAAACGCCTAATCACAAACATGATGAATCGATGATATGTTCAGGAACACATAGTCATTCGCATAACCATCATGCTCAT CATCACGCGCATGTACATTAA
Upstream 100 bases:
>100_bases GGCCAATCAATGATTTATTCATTAGATGACATCCACGTAGCAACTATGTTAAAGCAAGCCATACATCACGCGAATCATCC TAAAGAAAGTGGGTTATAAT
Downstream 100 bases:
>100_bases TAATTTTAACCTACTGCCATTACATCGATTAAACTTTTCAATGGCAGTAGGTTTTTATGTCTTTATGGCGACTTGTTTAG TCTTTGATGATGCAATGTTT
Product: cation-efflux system membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDTFSLGVALIAFIYAEKNAIAT KTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSEVQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAF LHVIGDLLGSVGAITAAILIWAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQS VHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHKHDESMICSGTHSHSHNHHAH HHAHVH
Sequences:
>Translated_326_residues MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDTFSLGVALIAFIYAEKNAIAT KTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSEVQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAF LHVIGDLLGSVGAITAAILIWAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQS VHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHKHDESMICSGTHSHSHNHHAH HHAHVH >Mature_325_residues SHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDTFSLGVALIAFIYAEKNAIATK TFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSEVQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFL HVIGDLLGSVGAITAAILIWAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQSV HDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHKHDESMICSGTHSHSHNHHAHH HAHVH
Specific function: Involved in divalent cation and potassium homeostasis in the cell. Catalyzes the active efflux of zinc, cadmium and cobalt, in exchange for potassium and H(+) ions [H]
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily [H]
Homologues:
Organism=Homo sapiens, GI52352805, Length=327, Percent_Identity=28.1345565749235, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI20070323, Length=319, Percent_Identity=27.8996865203762, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI21361112, Length=336, Percent_Identity=27.0833333333333, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI21359890, Length=321, Percent_Identity=27.1028037383178, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI289803013, Length=285, Percent_Identity=28.4210526315789, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI289803009, Length=285, Percent_Identity=28.4210526315789, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI289803007, Length=285, Percent_Identity=28.4210526315789, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI289803003, Length=285, Percent_Identity=28.4210526315789, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI64762489, Length=288, Percent_Identity=28.4722222222222, Blast_Score=124, Evalue=8e-29, Organism=Homo sapiens, GI14210520, Length=237, Percent_Identity=27.4261603375527, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI52351208, Length=192, Percent_Identity=31.25, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI222080086, Length=109, Percent_Identity=33.0275229357798, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI40255009, Length=109, Percent_Identity=33.0275229357798, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI52352803, Length=124, Percent_Identity=35.4838709677419, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1786966, Length=288, Percent_Identity=42.7083333333333, Blast_Score=189, Evalue=3e-49, Organism=Caenorhabditis elegans, GI193210990, Length=328, Percent_Identity=28.9634146341463, Blast_Score=153, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17555794, Length=325, Percent_Identity=30.7692307692308, Blast_Score=144, Evalue=7e-35, Organism=Caenorhabditis elegans, GI17555796, Length=327, Percent_Identity=30.5810397553517, Blast_Score=140, Evalue=7e-34, Organism=Caenorhabditis elegans, GI32564488, Length=324, Percent_Identity=29.9382716049383, Blast_Score=139, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6320411, Length=191, Percent_Identity=34.5549738219895, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6324892, Length=134, Percent_Identity=39.5522388059701, Blast_Score=86, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6323899, Length=139, Percent_Identity=38.1294964028777, Blast_Score=83, Evalue=5e-17, Organism=Drosophila melanogaster, GI24656728, Length=337, Percent_Identity=27.299703264095, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24656724, Length=337, Percent_Identity=27.299703264095, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24656720, Length=337, Percent_Identity=27.299703264095, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24656715, Length=337, Percent_Identity=27.299703264095, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI21357035, Length=337, Percent_Identity=27.299703264095, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24583858, Length=333, Percent_Identity=25.5255255255255, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI24645863, Length=141, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24584409, Length=162, Percent_Identity=30.8641975308642, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI28574430, Length=162, Percent_Identity=30.8641975308642, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24585900, Length=144, Percent_Identity=31.25, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24585898, Length=144, Percent_Identity=31.25, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24585896, Length=144, Percent_Identity=31.25, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI19921672, Length=144, Percent_Identity=31.25, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 36281; Mature: 36150
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDT CCCCCCCHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FSLGVALIAFIYAEKNAIATKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSE HHHHHHHHHHHHHCCCCCEEHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC VQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILI CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHH VHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHK HHCEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHCCHHHEEEEEEEEEEEEECCCCC HDESMICSGTHSHSHNHHAHHHAHVH CCCCEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDT CCCCCCHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FSLGVALIAFIYAEKNAIATKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSE HHHHHHHHHHHHHCCCCCEEHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC VQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILI CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHH VHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHK HHCEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHCCHHHEEEEEEEEEEEEECCCCC HDESMICSGTHSHSHNHHAHHHAHVH CCCCEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9308178; 9384377; 9099864 [H]