| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is pmi [H]
Identifier: 82751744
GI number: 82751744
Start: 2158702
End: 2159640
Strand: Reverse
Name: pmi [H]
Synonym: SAB2027c
Alternate gene names: 82751744
Gene position: 2159640-2158702 (Counterclockwise)
Preceding gene: 82751745
Following gene: 82751743
Centisome position: 78.75
GC content: 34.19
Gene sequence:
>939_bases ATGCCATTATTTTTACAACCAATTTTAAAAACAAAATTATGGGGCGGTCAACGTCTAAGTGTGTTTGGATATCAATTAGA CAATGATACAACTGGGGAATGTTGGTGTGTGTCAGCACATCCAAATGGTACGAGCGAGATTATTAATGGACCATATCAAG GTCAAACATTAGACCGTATTTGGTCAGAACATCGTGAATTGTTTGGTGATTTCCCAAGCAAAGATTTTCCGCTTCTAACT AAAATAGTGGATGCAAGAGAATCACTTTCTATTCATGTGCACCCTGATAATTCTTATGCTTATGAGCATGAAAATGGGCA ATATGGCAAATCTGAATGTTGGTATATTATAGATGCAGAAGAAGATGCAGAAATAATTATAGGGACATTAGCAGAGTCTA GAGAAGAAGTTGCGAATCATGTTCAACACGGAACGATAGAGTCGATACTTAGATATATTAAAGTAAAACCTGGAGAATTC TATTTTATTCCAGCAGGAACAGTACATACTATTTCTTCAGGAATATTAGCATACGAAACGATGCAATCGTCAGACATTAC ATATAGACTTTATGATTTCAATCGTCAAGATAATCAATATAATGATAGACCGTTAAATATTGAAAAAGCTTTAGACGTTA TTCAGTACAATGCACCATTACCTAATATTTTGCCTGAAAGTGAAATTATTGAAAACCATAAGTGTACACACATTGTATCG AATGATTTCTTTACATTGGTTAAATGGGAAATTTCTGGCACGTTAAATTATATGAAGCCTAGAGAGTTCTGTTTAGTTAC AGTGTTGGAAGGTGAAGGGCAAATGATTGTCGATGGTGAAATTTTCAAACTGACTACTGGTACAAACTTTATTTTGACTT CTGAAGATTTGGATAGTGTCTTTGAAGGTGATTTTACATTGATGATTAGCTATGTGTAA
Upstream 100 bases:
>100_bases GGAAGTTTATAATACGATGTAAATGAGAACAAAATCAAAATATAATGGAACAACAACATCAGAGTTCTATTGCTTACTTA ATCACAATGGAGGTGCAACA
Downstream 100 bases:
>100_bases TAGTGTAATAACAATTTAGGAGTGAATGATTTGAAGCAATTTCTATATATTGTGTTAGTATGTGGTGTGATAGCAGGTCT TGGTGCTTTCTTACATATAC
Product: mannose-6-phosphate isomerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPLFLQPILKTKLWGGQRLSVFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLT KIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAEEDAEIIIGTLAESREEVANHVQHGTIESILRYIKVKPGEF YFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSVFEGDFTLMISYV
Sequences:
>Translated_312_residues MPLFLQPILKTKLWGGQRLSVFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLT KIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAEEDAEIIIGTLAESREEVANHVQHGTIESILRYIKVKPGEF YFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSVFEGDFTLMISYV >Mature_311_residues PLFLQPILKTKLWGGQRLSVFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLTK IVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAEEDAEIIIGTLAESREEVANHVQHGTIESILRYIKVKPGEFY FIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVSN DFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSVFEGDFTLMISYV
Specific function: Unknown
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR014628 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 35627; Mature: 35496
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLFLQPILKTKLWGGQRLSVFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRI CCEEHHHHHHHHCCCCCEEEEEEEEECCCCCCCEEEEECCCCCHHHHCCCCCCCCHHHHH WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE HHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCCCEEEEEECC EDAEIIIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET CCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHCCEEEEEE MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS ECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEC NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSV CCEEEEEEEEEECEEECCCCCCEEEEEEEECCCCEEECCEEEEEECCCEEEEECCCHHHH FEGDFTLMISYV HCCCEEEEEEEC >Mature Secondary Structure PLFLQPILKTKLWGGQRLSVFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRI CEEHHHHHHHHCCCCCEEEEEEEEECCCCCCCEEEEECCCCCHHHHCCCCCCCCHHHHH WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE HHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCCCEEEEEECC EDAEIIIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET CCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHCCEEEEEE MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS ECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEC NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSV CCEEEEEEEEEECEEECCCCCCEEEEEEEECCCCEEECCEEEEEECCCEEEEECCCHHHH FEGDFTLMISYV HCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8293960; 12397186 [H]