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The map label for this gene is ydiC [H]

Identifier: 82751654

GI number: 82751654

Start: 2062241

End: 2062903

Strand: Reverse

Name: ydiC [H]

Synonym: SAB1936c

Alternate gene names: 82751654

Gene position: 2062903-2062241 (Counterclockwise)

Preceding gene: 82751655

Following gene: 82751653

Centisome position: 75.22

GC content: 34.99

Gene sequence:

>663_bases
ATGAATTCGCTGCTCATTGATACATCGAATCAACCATTATCAGTAGCATTGATGCAAAACGATGAAGTTTTAGCTGAAAT
AACTACGGATTCTAAACAAAATCATTCAGTGCAATTAATGCCTGCGATTAGTCAGCTATTTGAGCAGAGCAAAATAGCTA
AACAGCAATTAGATGCGATTATTGTTGCTGAAGGTCCTGGTTCATATACTGGCTTACGTATCGGTGTTACTGTTGCTAAA
ACATTAGCGTATGCGTTAGATGTTAAATTATATGGTGTTTCATCATTAAAGGCATTGGCAGCAACAATCGATCATACTGA
TAAATTATTGGTTCCTGTATTTGATGCAAGACGACAAGCAGTTTATACAGGCATATTCCAGTGGCAAAATGGTCAATTAG
TGACTATTTTAGAAGATCAATATATGTCGATAGAAGCATTGCGAGCTTTTTTAGAAGATTTAAACCAACCATTTATTTAT
ATTGGAAAAGATACTGTAAAATTACCAGATGAATTACAAGGTGATGGGATTGCGCAGCTACCAAATGCATCAGTCATGTA
TCAATTGATAGATAAACCTTCAGACGTACATACATTTACTCCTAAATACCATAAATTAGCTGAGGCGGAACGAAATTGGA
TCAACAGTCAAAAGAACAATTAA

Upstream 100 bases:

>100_bases
CATTTATCTATTAACATTTCAACAATATCTGAAAATTCAAGACAAATTGAGTTGTTCGCGCAAGGAGAACATTATGAACA
AATTAAGGAGGCAATTATCC

Downstream 100 bases:

>100_bases
ACATTAGAGAGATGACCAAAGAAGATGTGCCACAAGTCTTTGATATTGAGCGTCGGAGTTTCAATGATAGTTCTTGGACA
ATTGACGCATTTTATCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSKIAKQQLDAIIVAEGPGSYTGLRIGVTVAK
TLAYALDVKLYGVSSLKALAATIDHTDKLLVPVFDARRQAVYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIY
IGKDTVKLPDELQGDGIAQLPNASVMYQLIDKPSDVHTFTPKYHKLAEAERNWINSQKNN

Sequences:

>Translated_220_residues
MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSKIAKQQLDAIIVAEGPGSYTGLRIGVTVAK
TLAYALDVKLYGVSSLKALAATIDHTDKLLVPVFDARRQAVYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIY
IGKDTVKLPDELQGDGIAQLPNASVMYQLIDKPSDVHTFTPKYHKLAEAERNWINSQKNN
>Mature_220_residues
MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSKIAKQQLDAIIVAEGPGSYTGLRIGVTVAK
TLAYALDVKLYGVSSLKALAATIDHTDKLLVPVFDARRQAVYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIY
IGKDTVKLPDELQGDGIAQLPNASVMYQLIDKPSDVHTFTPKYHKLAEAERNWINSQKNN

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=173, Percent_Identity=26.5895953757225, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 24449; Mature: 24449

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSKIAKQQLDAI
CCCEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCEE
IVAEGPGSYTGLRIGVTVAKTLAYALDVKLYGVSSLKALAATIDHTDKLLVPVFDARRQA
EEECCCCCCCEEEEHHHHHHHHHHHHEEEEECHHHHHHHHHHHCCCCCEEEEEHHHHHHH
VYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIYIGKDTVKLPDELQGDGIAQL
EEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHCCCCCCCC
PNASVMYQLIDKPSDVHTFTPKYHKLAEAERNWINSQKNN
CCHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSKIAKQQLDAI
CCCEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCEE
IVAEGPGSYTGLRIGVTVAKTLAYALDVKLYGVSSLKALAATIDHTDKLLVPVFDARRQA
EEECCCCCCCEEEEHHHHHHHHHHHHEEEEECHHHHHHHHHHHCCCCCEEEEEHHHHHHH
VYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIYIGKDTVKLPDELQGDGIAQL
EEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHCCCCCCCC
PNASVMYQLIDKPSDVHTFTPKYHKLAEAERNWINSQKNN
CCHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]