Definition Staphylococcus aureus RF122, complete genome.
Accession NC_007622
Length 2,742,531

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The map label for this gene is ydjE [H]

Identifier: 82751642

GI number: 82751642

Start: 2048716

End: 2049675

Strand: Reverse

Name: ydjE [H]

Synonym: SAB1924c

Alternate gene names: 82751642

Gene position: 2049675-2048716 (Counterclockwise)

Preceding gene: 82751643

Following gene: 82751634

Centisome position: 74.74

GC content: 34.17

Gene sequence:

>960_bases
ATGAGACGTCTATTTTCAATAGGAGAAGCATTAATTGATTTTATTCCAAATATTACAAATGCGAATTTAAAAGATGTTCA
AACATTTATGAAGCAAATTGATGGCGCACCTTGTAATGTAGCTTGTACAGTTCAAAAGTTAGGACAACAAGCGTATATGA
TTACACAATTAGGTAATGATGCATTTGGAGATATCATTATTGAAACGATATCAAGTATTGGTGTAGATGTATCAAAAGTG
TATCGCACGAATGAAGCAAACACTGCGTTAGCTTTTGTGAGTTTGACTGAAGCGGGCGAGCGAGATTTTTCTTTTTATCG
TAAGCCCTCTGCTGATATGTTATTTGAACCAAGTTTTGTGAATGATATTGATGTGAATGAAAACGATATAGTACATTTTT
GTTCTGTTGATTTGGTCGATAGTCCGATGAGAGATGCACATTATCAATTGATTACCAAAACATTAAATGCAAATGGTACT
GTCGTATTTGATCCTAATGTAAGATTGCCATTATGGGATAACGCTGAAGATTTAAGACAAACTATTCATACCTTTTTGCC
ATTGGCGCATATTATAAAAGTTTCAGATGAAGAATTAGAATTTATTACATGTATTCATGATGAAAATGAAGCCATTCAAT
CTTTATTTACAGGTAATGTCACTGTAGTCATTTATACGAAGGGAGCAGATGGTGCTGCCGTATATTTGAAAAATGGTATT
AGTCATTATCATAGTGGCTATAAGGTAAAACCTGTTGATACAACTGGGGCAGGGGATGCCTTTATTGGTGCAGTTATTAG
CAGGATTTTAGCAACCGATGTGTTAAATTTAACTCAGTTATTTGAAAATGAAGGTGAGGAAATTTTAGCGTTTAGCAATC
GCGTTGCTGCAATAGTGACAACGAAGTATGGTGCTATTAATAGTTTGCCAACATTACAAGAGGTTGAACAAGCATTTTAA

Upstream 100 bases:

>100_bases
GAATTTTCCCGACAGAAGACGCACTAGGTATTAAAACATCAACAGAATCAGGGCAAGTATATTTACAATTTACTAAATAC
GATTTAAAGGATGAACATAA

Downstream 100 bases:

>100_bases
ATAATTCATTTATAAAACAGTGTAGGAAGCAAGTTGAATCTTGTGCTACACTGTTTTTTAAAACAAAATAAGATTCACGG
GGTAGGAAATTGTAGCATTT

Product: fructokinase

Products: ADP; D-fructose 6-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRRLFSIGEALIDFIPNITNANLKDVQTFMKQIDGAPCNVACTVQKLGQQAYMITQLGNDAFGDIIIETISSIGVDVSKV
YRTNEANTALAFVSLTEAGERDFSFYRKPSADMLFEPSFVNDIDVNENDIVHFCSVDLVDSPMRDAHYQLITKTLNANGT
VVFDPNVRLPLWDNAEDLRQTIHTFLPLAHIIKVSDEELEFITCIHDENEAIQSLFTGNVTVVIYTKGADGAAVYLKNGI
SHYHSGYKVKPVDTTGAGDAFIGAVISRILATDVLNLTQLFENEGEEILAFSNRVAAIVTTKYGAINSLPTLQEVEQAF

Sequences:

>Translated_319_residues
MRRLFSIGEALIDFIPNITNANLKDVQTFMKQIDGAPCNVACTVQKLGQQAYMITQLGNDAFGDIIIETISSIGVDVSKV
YRTNEANTALAFVSLTEAGERDFSFYRKPSADMLFEPSFVNDIDVNENDIVHFCSVDLVDSPMRDAHYQLITKTLNANGT
VVFDPNVRLPLWDNAEDLRQTIHTFLPLAHIIKVSDEELEFITCIHDENEAIQSLFTGNVTVVIYTKGADGAAVYLKNGI
SHYHSGYKVKPVDTTGAGDAFIGAVISRILATDVLNLTQLFENEGEEILAFSNRVAAIVTTKYGAINSLPTLQEVEQAF
>Mature_319_residues
MRRLFSIGEALIDFIPNITNANLKDVQTFMKQIDGAPCNVACTVQKLGQQAYMITQLGNDAFGDIIIETISSIGVDVSKV
YRTNEANTALAFVSLTEAGERDFSFYRKPSADMLFEPSFVNDIDVNENDIVHFCSVDLVDSPMRDAHYQLITKTLNANGT
VVFDPNVRLPLWDNAEDLRQTIHTFLPLAHIIKVSDEELEFITCIHDENEAIQSLFTGNVTVVIYTKGADGAAVYLKNGI
SHYHSGYKVKPVDTTGAGDAFIGAVISRILATDVLNLTQLFENEGEEILAFSNRVAAIVTTKYGAINSLPTLQEVEQAF

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87082343, Length=317, Percent_Identity=25.8675078864353, Blast_Score=83, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17532905, Length=292, Percent_Identity=27.7397260273973, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: 2.7.1.4

Molecular weight: Translated: 35167; Mature: 35167

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLFSIGEALIDFIPNITNANLKDVQTFMKQIDGAPCNVACTVQKLGQQAYMITQLGND
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHCCCEEEEECCCCC
AFGDIIIETISSIGVDVSKVYRTNEANTALAFVSLTEAGERDFSFYRKPSADMLFEPSFV
HHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCEEECCCCC
NDIDVNENDIVHFCSVDLVDSPMRDAHYQLITKTLNANGTVVFDPNVRLPLWDNAEDLRQ
CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCHHHHHH
TIHTFLPLAHIIKVSDEELEFITCIHDENEAIQSLFTGNVTVVIYTKGADGAAVYLKNGI
HHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHCCCEEEEEEECCCCCEEEEEHHCH
SHYHSGYKVKPVDTTGAGDAFIGAVISRILATDVLNLTQLFENEGEEILAFSNRVAAIVT
HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEE
TKYGAINSLPTLQEVEQAF
ECCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MRRLFSIGEALIDFIPNITNANLKDVQTFMKQIDGAPCNVACTVQKLGQQAYMITQLGND
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHCCCEEEEECCCCC
AFGDIIIETISSIGVDVSKVYRTNEANTALAFVSLTEAGERDFSFYRKPSADMLFEPSFV
HHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCEEECCCCC
NDIDVNENDIVHFCSVDLVDSPMRDAHYQLITKTLNANGTVVFDPNVRLPLWDNAEDLRQ
CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCHHHHHH
TIHTFLPLAHIIKVSDEELEFITCIHDENEAIQSLFTGNVTVVIYTKGADGAAVYLKNGI
HHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHCCCEEEEEEECCCCCEEEEEHHCH
SHYHSGYKVKPVDTTGAGDAFIGAVISRILATDVLNLTQLFENEGEEILAFSNRVAAIVT
HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEE
TKYGAINSLPTLQEVEQAF
ECCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-fructose

Specific reaction: ATP + D-fructose = ADP + D-fructose 6-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]