| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is ydiL [H]
Identifier: 82751633
GI number: 82751633
Start: 2040572
End: 2041315
Strand: Direct
Name: ydiL [H]
Synonym: SAB1915
Alternate gene names: 82751633
Gene position: 2040572-2041315 (Clockwise)
Preceding gene: 82751630
Following gene: 82751635
Centisome position: 74.4
GC content: 30.24
Gene sequence:
>744_bases ATGACAAGACTATGGGCATCATTGCTAACTGTTATTATTTATATATTGTCTCAATTTTTACCGCTTCTCATTGTAAAAAA ATTACCATTTGTACAATATAGTGGCATAGAACTGACTAAAGCAGTCAATTACATACAACTTGTTCTATTTTTAATCGCCG CCACGACGATTATTTTAATTAATTTAAAAATTAAAAATCCAACAAAATTAGAATTAGAAGTTAAAGAACCTAAAAAATAT ATCATTCCATGGGCATTGCTTGGATTTGCACTGGTAATGATTTATCAAATGGTAGTTAGTATTGTATATACTCAAATTTT TGGCACACAACAAACAAGTCCAAATACTGAGCGTTTAATCGTTATTGCACGAAAGATTCCATTGTTTATCTTTTTCGTAT CAATCGTTGGTCCTCTATTAGAAGAATATGTATTTAGAAAAGTAATCTTTGGCGAATTATTTAATGCAATTAAAGGTAAC CGTATCGTCGCATTTGCTATTGCAACGACTGTAAGCTCATTAATCTTTGCTTTAGCGCATAATGACTATAAATTTATTCC TATTTACTTTGGTATGGGCGTCATTTTTTCATTAGCATATGTATGGACGAAACGACTTGCTGTTCCAATTATTATTCATA TGTTACAAAATGGATTTGTCGTTATATTCCAATTACTTAATCCTGAAGCTTTGAAAAAAGCCACGGAACAAGCGAATTTT ATATATCACTTTTTTTTTCCATAA
Upstream 100 bases:
>100_bases AATTTGGTCAAAATTTCAAGTCATAACCTTTCAATTAAATTTTGTAACTTCAAGTTATTTACGATAAAATAAATTATAAA CAAATATTTGGAGGAAAATT
Downstream 100 bases:
>100_bases TATAAAAAACGAATCACACACGGATTATCGTCGCTGTGATTCGTTTTTATTTTTCTTTTTATTTCGCTTTACAAATAAGA ATAGCATGATTGAAAATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTRLWASLLTVIIYILSQFLPLLIVKKLPFVQYSGIELTKAVNYIQLVLFLIAATTIILINLKIKNPTKLELEVKEPKKY IIPWALLGFALVMIYQMVVSIVYTQIFGTQQTSPNTERLIVIARKIPLFIFFVSIVGPLLEEYVFRKVIFGELFNAIKGN RIVAFAIATTVSSLIFALAHNDYKFIPIYFGMGVIFSLAYVWTKRLAVPIIIHMLQNGFVVIFQLLNPEALKKATEQANF IYHFFFP
Sequences:
>Translated_247_residues MTRLWASLLTVIIYILSQFLPLLIVKKLPFVQYSGIELTKAVNYIQLVLFLIAATTIILINLKIKNPTKLELEVKEPKKY IIPWALLGFALVMIYQMVVSIVYTQIFGTQQTSPNTERLIVIARKIPLFIFFVSIVGPLLEEYVFRKVIFGELFNAIKGN RIVAFAIATTVSSLIFALAHNDYKFIPIYFGMGVIFSLAYVWTKRLAVPIIIHMLQNGFVVIFQLLNPEALKKATEQANF IYHFFFP >Mature_246_residues TRLWASLLTVIIYILSQFLPLLIVKKLPFVQYSGIELTKAVNYIQLVLFLIAATTIILINLKIKNPTKLELEVKEPKKYI IPWALLGFALVMIYQMVVSIVYTQIFGTQQTSPNTERLIVIARKIPLFIFFVSIVGPLLEEYVFRKVIFGELFNAIKGNR IVAFAIATTVSSLIFALAHNDYKFIPIYFGMGVIFSLAYVWTKRLAVPIIIHMLQNGFVVIFQLLNPEALKKATEQANFI YHFFFP
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase U48 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003675 [H]
Pfam domain/function: PF02517 Abi [H]
EC number: NA
Molecular weight: Translated: 28301; Mature: 28169
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLWASLLTVIIYILSQFLPLLIVKKLPFVQYSGIELTKAVNYIQLVLFLIAATTIILI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHEE NLKIKNPTKLELEVKEPKKYIIPWALLGFALVMIYQMVVSIVYTQIFGTQQTSPNTERLI EEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE VIARKIPLFIFFVSIVGPLLEEYVFRKVIFGELFNAIKGNRIVAFAIATTVSSLIFALAH EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHC NDYKFIPIYFGMGVIFSLAYVWTKRLAVPIIIHMLQNGFVVIFQLLNPEALKKATEQANF CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCHHHHHHHHHHCCE IYHFFFP EEEEECC >Mature Secondary Structure TRLWASLLTVIIYILSQFLPLLIVKKLPFVQYSGIELTKAVNYIQLVLFLIAATTIILI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHEE NLKIKNPTKLELEVKEPKKYIIPWALLGFALVMIYQMVVSIVYTQIFGTQQTSPNTERLI EEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE VIARKIPLFIFFVSIVGPLLEEYVFRKVIFGELFNAIKGNRIVAFAIATTVSSLIFALAH EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHC NDYKFIPIYFGMGVIFSLAYVWTKRLAVPIIIHMLQNGFVVIFQLLNPEALKKATEQANF CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCHHHHHHHHHHCCE IYHFFFP EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]