Click here to switch to the map view.

The map label for this gene is ytfH [C]

Identifier: 82751557

GI number: 82751557

Start: 1971358

End: 1971711

Strand: Reverse

Name: ytfH [C]

Synonym: SAB1836c

Alternate gene names: 82751557

Gene position: 1971711-1971358 (Counterclockwise)

Preceding gene: 82751559

Following gene: 82751555

Centisome position: 71.89

GC content: 29.1

Gene sequence:

>354_bases
ATGGTTAAAATATGTAACGATGGATTTGATGAAAATTTTATTGAAGAACATAGAAATCTATATAGCATTGCATACACACA
AAATGTGTTATCTGGAAGATATAAAAATCTAATTATTTGGTACTTAAAAACAGAGGGAAAACGATTTGGTGAAATTAAGA
AATTTTTCGCAAATATATCTCAAGGATCACTAACAAAACAGCTTAAAGAATTAGAATCAGATGGTATTTTAAATAGAGAA
GTATATGCAGAAGTTCCGCCTAGAGTTATATATAGTTTGACTGACAAAGGTAAAGATATCTTGCCCTTAATTGATTTGAT
GGAGAAATACGGTCGAATGTATGGTGATAAATAG

Upstream 100 bases:

>100_bases
ATATATAAAATACGTTAGTATATATGATATAAATAGGGAAGTAGGCAAAAATTATTAACTAAGTACTAACAATCATACTA
ATGTGGAGAGGTAGAGCTAA

Downstream 100 bases:

>100_bases
CTTCTAAATTAGATGATACATTTTTAATGGAATAGCGATTAAAAAATTAAACTTTAACATAGAAAAATCGATTGAGAAAT
AATTTTCAGGTTATTTCAAC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MVKICNDGFDENFIEEHRNLYSIAYTQNVLSGRYKNLIIWYLKTEGKRFGEIKKFFANISQGSLTKQLKELESDGILNRE
VYAEVPPRVIYSLTDKGKDILPLIDLMEKYGRMYGDK

Sequences:

>Translated_117_residues
MVKICNDGFDENFIEEHRNLYSIAYTQNVLSGRYKNLIIWYLKTEGKRFGEIKKFFANISQGSLTKQLKELESDGILNRE
VYAEVPPRVIYSLTDKGKDILPLIDLMEKYGRMYGDK
>Mature_117_residues
MVKICNDGFDENFIEEHRNLYSIAYTQNVLSGRYKNLIIWYLKTEGKRFGEIKKFFANISQGSLTKQLKELESDGILNRE
VYAEVPPRVIYSLTDKGKDILPLIDLMEKYGRMYGDK

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13678; Mature: 13678

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKICNDGFDENFIEEHRNLYSIAYTQNVLSGRYKNLIIWYLKTEGKRFGEIKKFFANIS
CCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCC
QGSLTKQLKELESDGILNREVYAEVPPRVIYSLTDKGKDILPLIDLMEKYGRMYGDK
CCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVKICNDGFDENFIEEHRNLYSIAYTQNVLSGRYKNLIIWYLKTEGKRFGEIKKFFANIS
CCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCC
QGSLTKQLKELESDGILNREVYAEVPPRVIYSLTDKGKDILPLIDLMEKYGRMYGDK
CCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]