| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82751542
Identifier: 82751542
GI number: 82751542
Start: 1955012
End: 1955998
Strand: Direct
Name: 82751542
Synonym: SAB1821
Alternate gene names: NA
Gene position: 1955012-1955998 (Clockwise)
Preceding gene: 82751536
Following gene: 82751546
Centisome position: 71.28
GC content: 32.22
Gene sequence:
>987_bases ATGAACGATCAATGGTATAAACATTTAATTGGTGCCAGAACAATTAAAACTGGTATTGCCATTTTTTTAACAGCTGTCTT TTGTATGGCACTAGATTTAACACCCATCTATGCCATTTTAACAGCTGTAGTCACAATTGAACCAACTGCCAAGGCATCAC TTATTAAAGGTTATCGTAGATTACCTGCTACGGTAATTGGTGCAGGCTTTGCAGTATTATTTACATATTTATTCGGCGAT CAATCACCTTTTACATATGCATTGAGTGCGACGTTCACGATTTTATTCTGTACAAAACTCAAATTGCAAGTTGGTACGAA TGTTGCTGTACTAACATCATTAGCTATGATTCCAGGTATTCATGATGCCTACATATTCAACTTTTTGTCTCGAACATTGA CAGCGATTATTGGACTCGTGACATCAGGTTTAATTAACTTCATGGTGTTTCCACCTAAGTATTATGGTCAGGTCGAAGAA AAATTAAGTAAGACAGATGCCTTGATGTATAAATTATTTTACAATCGCTGCCAAGAACTTATCTTATCAAGACTGCAATC TGATAAAAGCGAAAAAGCATATAAAAATATTTTCAATTTAAACAATCAAGTTGAAACGTTAATAAGTTATCAACGTGATG AATTAAGCTATCATAAGAAAAAAGAATGTGATTGGAAATTACTCAATCAATTAACTAAACGTGCATATACGAATCGTTTG TTTATCACTCATTTATCAAATATCATTTACTTGCCTAAAAATACTCGTGTTAACTTTTCAGGTGACGAAAAAATGGCATT ACTAAAAATTAGTAGTAGCATCAAAGATATTTTTTATGATGGTTCATTTAAGAGAGAAGATGATTCTGTAGAAACTTTAC GTTCGACAATAAAAGCACTTGAAATTAGTGGTGAAAATCAAATTAAAAGTCATATACTATACGAAGTTCTAATGATTTAT CGACTGCTAGACAGCAGATATGCTTAA
Upstream 100 bases:
>100_bases ATGATTATTTCAAATATTTTACATACATGAACTTTTCCAATGTACGATACTATTATTATAAAGCGCTCGCTAAGATTTTA CGATGATTAGAGGTTAAAAA
Downstream 100 bases:
>100_bases TTTAAGTACCTTATGCTAATTGGCACCATTGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACC CCAACTTGCATTGTCTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVVTIEPTAKASLIKGYRRLPATVIGAGFAVLFTYLFGD QSPFTYALSATFTILFCTKLKLQVGTNVAVLTSLAMIPGIHDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEE KLSKTDALMYKLFYNRCQELILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYHKKKECDWKLLNQLTKRAYTNRL FITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKDIFYDGSFKREDDSVETLRSTIKALEISGENQIKSHILYEVLMIY RLLDSRYA
Sequences:
>Translated_328_residues MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVVTIEPTAKASLIKGYRRLPATVIGAGFAVLFTYLFGD QSPFTYALSATFTILFCTKLKLQVGTNVAVLTSLAMIPGIHDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEE KLSKTDALMYKLFYNRCQELILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYHKKKECDWKLLNQLTKRAYTNRL FITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKDIFYDGSFKREDDSVETLRSTIKALEISGENQIKSHILYEVLMIY RLLDSRYA >Mature_328_residues MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVVTIEPTAKASLIKGYRRLPATVIGAGFAVLFTYLFGD QSPFTYALSATFTILFCTKLKLQVGTNVAVLTSLAMIPGIHDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEE KLSKTDALMYKLFYNRCQELILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYHKKKECDWKLLNQLTKRAYTNRL FITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKDIFYDGSFKREDDSVETLRSTIKALEISGENQIKSHILYEVLMIY RLLDSRYA
Specific function: Unknown
COG id: COG4129
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0421 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010343 [H]
Pfam domain/function: PF06081 DUF939 [H]
EC number: NA
Molecular weight: Translated: 37436; Mature: 37436
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVVTIEPTAKASLIKGYRR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LPATVIGAGFAVLFTYLFGDQSPFTYALSATFTILFCTKLKLQVGTNVAVLTSLAMIPGI CCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC HDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEEKLSKTDALMYKLFYNRCQEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYHKKKECDWKLLNQLTKRAYTNRL HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHH FITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKDIFYDGSFKREDDSVETLRSTIKAL HEEECCCEEECCCCCEEECCCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH EISGENQIKSHILYEVLMIYRLLDSRYA HCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVVTIEPTAKASLIKGYRR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LPATVIGAGFAVLFTYLFGDQSPFTYALSATFTILFCTKLKLQVGTNVAVLTSLAMIPGI CCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC HDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEEKLSKTDALMYKLFYNRCQEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYHKKKECDWKLLNQLTKRAYTNRL HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHH FITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKDIFYDGSFKREDDSVETLRSTIKAL HEEECCCEEECCCCCEEECCCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH EISGENQIKSHILYEVLMIYRLLDSRYA HCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11418146 [H]