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The map label for this gene is ygeY [C]

Identifier: 82751340

GI number: 82751340

Start: 1749865

End: 1751274

Strand: Reverse

Name: ygeY [C]

Synonym: SAB1611c

Alternate gene names: 82751340

Gene position: 1751274-1749865 (Counterclockwise)

Preceding gene: 82751341

Following gene: 82751339

Centisome position: 63.86

GC content: 34.75

Gene sequence:

>1410_bases
ATGTGGAAAGAAAAAGTTCAACAATACGAAGATCAAATCATTAATGACTTAAAAGGATTATTAGCAATTGAAAGTGTGAG
AGATGATGCAAAAGCATCAGAAGACGCACCAGTTGGTCCAGGTCCTCGTAAGGCATTAGACTACATGTATGAAATTGCAC
ATAGAGATGGATTTACAACACATGATGTGGATCATATTGCAGGAAGAATTGAGGCAGGTAAAGGAAATGACGTATTAGGT
ATCTTATGTCATGTTGACGTTGTTCCTGCTGGTGATGGATGGGATAGTAATCCGTTTGAACCGGTCGTAACAGAAGATGC
TATCATAGCTAGAGGTACACTTGATGATAAAGGTCCAACAATTGCTGCTTATTATGCAATTAAGATATTAGAAGATATGA
ATGTGGATTGGAAGAAACGTATTCATATGATTATTGGTACGGATGAAGAATCTGATTGGAAATGTACGGATCGCTATTTT
AAAACAGAAGAAATGCCAACATTAGGTTTTGCACCAGATGCAGAATTTCCGTGTATTCATGGTGAAAAAGGCATTACAAC
ATTTGACTTAGTTCAAAATAAGCTTGCTGAAGATCAAGATGAATCTGATTATGAATTAATAACTTTTAAATCTGGTGAAC
GTTACAACATGGTACCTGATCATGCAGAAGCAAGAGTGCTTGTTAAAGAAAATATGACAGACGTTATTCAAGACTTTGAG
TACTTTTTAGAACAAAATCATTTACAAGGTGATAGTACTGTTGATAGTGGCATTCTAGTTTTAACAGTTGAAGGTAAAGC
GGTTCATGGTATGGATCCATCTATCGGTGTGAATGCGGGTCTTTACTTACTAAAATTCTTAGCATCATTAAATCTTGATA
ATAATGCACAAGCGTTTGTAGCATTTAGTAATCGCTACTTATTTAATTCAGATTTTGGTGAAAAGATGGGAATGAAATTC
CATACAGATGTCATGGGTGATGTGACAACTAACATTGGTGTTATTACATATGATAATGAAAATGCGGGTCTTTTCGGTAT
CAACTTACGCTACCCAGAGGGATTTGAATTTGAAAAAGCTATGGATCGTTTTGCAAATGAGATTCAACAATATGGCTTTG
AAGTGAAATTAGGTAAAGTCCAACCACCACATTATGTTGATAAAAATGATCCTTTTGTACAAAAGTTAGTTACTGCATAT
AGAAATCAAACAAATGATATGACTGAACCTTATACTATAGGTGGCGGTACTTATGCGAGAAACTTAGACAAGGGTGTAGC
ATTTGGCGCAATGTTTAGTGATTCTGAAGATTTAATGCATCAGAAAAATGAATATATCACTAAAAAACAGTTATTTAACG
CAACTAGTATTTACTTAGAAGCAATTTATTCATTATGCGTGGAGGAATAA

Upstream 100 bases:

>100_bases
TTTTGTTCCTTTTTATTATTTTCTGACATCTTATTGTAGTTTTTATATCATTTCATGTAAAATAGAGTTTAACTTATAGA
AAAAAGGAAGTCGATTTCGA

Downstream 100 bases:

>100_bases
TATATGGAAAAAATTTTTTTAAATGGTGAGTTTGTAAGTCCAAGTGAAGCAAAGGTTTCATACAACGACAGAGGATACGT
ATTTGGCGATGGTATTTATG

Product: dipeptidase PepV

Products: succinate; LL-2,6-diaminoheptanedioate

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVDHIAGRIEAGKGNDVLG
ILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYF
KTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLAEDQDESDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFE
YFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKF
HTDVMGDVTTNIGVITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQYGFEVKLGKVQPPHYVDKNDPFVQKLVTAY
RNQTNDMTEPYTIGGGTYARNLDKGVAFGAMFSDSEDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEE

Sequences:

>Translated_469_residues
MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVDHIAGRIEAGKGNDVLG
ILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYF
KTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLAEDQDESDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFE
YFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKF
HTDVMGDVTTNIGVITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQYGFEVKLGKVQPPHYVDKNDPFVQKLVTAY
RNQTNDMTEPYTIGGGTYARNLDKGVAFGAMFSDSEDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEE
>Mature_469_residues
MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVDHIAGRIEAGKGNDVLG
ILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYF
KTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLAEDQDESDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFE
YFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKF
HTDVMGDVTTNIGVITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQYGFEVKLGKVQPPHYVDKNDPFVQKLVTAY
RNQTNDMTEPYTIGGGTYARNLDKGVAFGAMFSDSEDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEE

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010964
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: 3.5.1.18

Molecular weight: Translated: 52785; Mature: 52785

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
HDVDHIAGRIEAGKGNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPT
CCHHHHHCEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCEECCCCEEEECCCCCCCCE
IAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEMPTLGFAPDAEFPCIH
EEEHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEE
GEKGITTFDLVQNKLAEDQDESDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFE
CCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
YFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFV
HHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE
AFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVITYDNENAGLFGINLRYPEGFEFEKA
EEECCEEEECCCHHHCCCEEECCHHCCHHCCEEEEEEECCCCCEEEEEECCCCCCCHHHH
MDRFANEIQQYGFEVKLGKVQPPHYVDKNDPFVQKLVTAYRNQTNDMTEPYTIGGGTYAR
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCHHHH
NLDKGVAFGAMFSDSEDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEE
HHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
HDVDHIAGRIEAGKGNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPT
CCHHHHHCEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCEECCCCEEEECCCCCCCCE
IAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEMPTLGFAPDAEFPCIH
EEEHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEE
GEKGITTFDLVQNKLAEDQDESDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFE
CCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
YFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFV
HHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE
AFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVITYDNENAGLFGINLRYPEGFEFEKA
EEECCEEEECCCHHHCCCEEECCHHCCHHCCEEEEEEECCCCCEEEEEECCCCCCCHHHH
MDRFANEIQQYGFEVKLGKVQPPHYVDKNDPFVQKLVTAYRNQTNDMTEPYTIGGGTYAR
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCHHHH
NLDKGVAFGAMFSDSEDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEE
HHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N-succinyl-LL-2,6-diaminoheptanedioate; H2O

Specific reaction: N-succinyl-LL-2,6-diaminoheptanedioate + H2O = succinate + LL-2,6-diaminoheptanedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA