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The map label for this gene is yrrN [H]

Identifier: 82751213

GI number: 82751213

Start: 1598393

End: 1599322

Strand: Reverse

Name: yrrN [H]

Synonym: SAB1484c

Alternate gene names: 82751213

Gene position: 1599322-1598393 (Counterclockwise)

Preceding gene: 82751214

Following gene: 82751212

Centisome position: 58.32

GC content: 34.3

Gene sequence:

>930_bases
ATGACTATGACAGAATTACTTGTCACACCCAAGTCATTAAGCCATATGGAAACACTTATTGATTTAGGTGCAGATGCTTT
TGTAATTGGCGAGCAAAAGTTTGGTTTAAGACTTCCAGGGGAATTCAATAGACAACAAATGACAGAGGCTGTCGCATTAG
CTCACAAAAACGATAAAAAAGTATATGCGGCGGTGAATGGATTATTTCATAATTATCATTTAGATGCTGTAGAAGATTAT
ATTAATTTTTTACATGAAATACGAGTTGACAGAATTATTTTCGGGGATCCAGCAGTAGTAATGTATGTGAAGGCGCAAGA
GAATCCAATACCACTTCATTGGAATGCAGAGACGTTAGTAACTAATCATTTTCAATGTAATTACTGGGGTAAAAGAGGCG
CATCAAGAGCTGTCTTAGCACGTGAGCTGAATTTGGATGAAATTATTAATATAAAAGAAAATTCAAATGTGGAAATTGAG
GTGCAAGTTCAAGGAATGACTTGTATGTTCCAATCAAAGCGTATGCTACTAGGCAATTATTATACGTTCCAAGATCGCCA
AATGAAAATTGAACGTCGCAATGATGAACAATCTTTATTACTTTATGATGAAGAAAGACAAAATAATTACCCAGTTTACG
AAGATTACAATGGTACGCACATTATGTCACCAAACGACATTTGTTTAATTGAAGAATTAGCACCATTTTTTGAGGCGGGT
ATAGATTCATTTAAAATCGATGGTATTCTACAAACGGAAGAATATATTAATGTGGTAACGGAACAGTATCGTCAAGCGAT
AGATTTGTACAATGAAGATCCTGAAATCTATGAAGATGAGAAATTTATGTTGATGGACCCAATTGAAGAAATTCAACCTG
ATCATCGACCATTTGACGAAGGTTTCTTATATAAACAAACAGTATATTAA

Upstream 100 bases:

>100_bases
AAAAGGTTCAAGATTATAACGAGTGGTTAATAAAGCAACCAGGATATAGAACGAATTTTTTAAATATAGACGATGGATTA
GCGATTTCAATTAAAGGAGA

Downstream 100 bases:

>100_bases
GGAGGTTAATCATGAAGACAATAGAAGAGATTAAATCAACTCCTAAAACAGTTATGAAGAAACCAGAATTATTAGCACCT
GCTGGAAACTTAGAAAAGTT

Product: proteinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTMTELLVTPKSLSHMETLIDLGADAFVIGEQKFGLRLPGEFNRQQMTEAVALAHKNDKKVYAAVNGLFHNYHLDAVEDY
INFLHEIRVDRIIFGDPAVVMYVKAQENPIPLHWNAETLVTNHFQCNYWGKRGASRAVLARELNLDEIINIKENSNVEIE
VQVQGMTCMFQSKRMLLGNYYTFQDRQMKIERRNDEQSLLLYDEERQNNYPVYEDYNGTHIMSPNDICLIEELAPFFEAG
IDSFKIDGILQTEEYINVVTEQYRQAIDLYNEDPEIYEDEKFMLMDPIEEIQPDHRPFDEGFLYKQTVY

Sequences:

>Translated_309_residues
MTMTELLVTPKSLSHMETLIDLGADAFVIGEQKFGLRLPGEFNRQQMTEAVALAHKNDKKVYAAVNGLFHNYHLDAVEDY
INFLHEIRVDRIIFGDPAVVMYVKAQENPIPLHWNAETLVTNHFQCNYWGKRGASRAVLARELNLDEIINIKENSNVEIE
VQVQGMTCMFQSKRMLLGNYYTFQDRQMKIERRNDEQSLLLYDEERQNNYPVYEDYNGTHIMSPNDICLIEELAPFFEAG
IDSFKIDGILQTEEYINVVTEQYRQAIDLYNEDPEIYEDEKFMLMDPIEEIQPDHRPFDEGFLYKQTVY
>Mature_308_residues
TMTELLVTPKSLSHMETLIDLGADAFVIGEQKFGLRLPGEFNRQQMTEAVALAHKNDKKVYAAVNGLFHNYHLDAVEDYI
NFLHEIRVDRIIFGDPAVVMYVKAQENPIPLHWNAETLVTNHFQCNYWGKRGASRAVLARELNLDEIINIKENSNVEIEV
QVQGMTCMFQSKRMLLGNYYTFQDRQMKIERRNDEQSLLLYDEERQNNYPVYEDYNGTHIMSPNDICLIEELAPFFEAGI
DSFKIDGILQTEEYINVVTEQYRQAIDLYNEDPEIYEDEKFMLMDPIEEIQPDHRPFDEGFLYKQTVY

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=349, Percent_Identity=27.2206303724928, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI87081910, Length=267, Percent_Identity=27.7153558052434, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1789548, Length=301, Percent_Identity=23.9202657807309, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 36191; Mature: 36060

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTELLVTPKSLSHMETLIDLGADAFVIGEQKFGLRLPGEFNRQQMTEAVALAHKNDKK
CCCHHEEECCHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHCCCCCE
VYAAVNGLFHNYHLDAVEDYINFLHEIRVDRIIFGDPAVVMYVKAQENPIPLHWNAETLV
EEEEEHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCEEEEEEEECCCCEEEEECCHHEE
TNHFQCNYWGKRGASRAVLARELNLDEIINIKENSNVEIEVQVQGMTCMFQSKRMLLGNY
ECCEEEECCCCCCCCHHHHHHHCCHHHEEEECCCCCEEEEEEECCEEEEEECCCEEECCE
YTFQDRQMKIERRNDEQSLLLYDEERQNNYPVYEDYNGTHIMSPNDICLIEELAPFFEAG
EEECCCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCEEECCCCEEEHHHHHHHHHCC
IDSFKIDGILQTEEYINVVTEQYRQAIDLYNEDPEIYEDEKFMLMDPIEEIQPDHRPFDE
CCCEEECEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHCCCCCCCCCC
GFLYKQTVY
CCEEEEECC
>Mature Secondary Structure 
TMTELLVTPKSLSHMETLIDLGADAFVIGEQKFGLRLPGEFNRQQMTEAVALAHKNDKK
CCHHEEECCHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHCCCCCE
VYAAVNGLFHNYHLDAVEDYINFLHEIRVDRIIFGDPAVVMYVKAQENPIPLHWNAETLV
EEEEEHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCEEEEEEEECCCCEEEEECCHHEE
TNHFQCNYWGKRGASRAVLARELNLDEIINIKENSNVEIEVQVQGMTCMFQSKRMLLGNY
ECCEEEECCCCCCCCHHHHHHHCCHHHEEEECCCCCEEEEEEECCEEEEEECCCEEECCE
YTFQDRQMKIERRNDEQSLLLYDEERQNNYPVYEDYNGTHIMSPNDICLIEELAPFFEAG
EEECCCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCEEECCCCEEEHHHHHHHHHCC
IDSFKIDGILQTEEYINVVTEQYRQAIDLYNEDPEIYEDEKFMLMDPIEEIQPDHRPFDE
CCCEEECEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHCCCCCCCCCC
GFLYKQTVY
CCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]