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The map label for this gene is bin3 [H]

Identifier: 82751033

GI number: 82751033

Start: 1420349

End: 1420960

Strand: Direct

Name: bin3 [H]

Synonym: SAB1298

Alternate gene names: 82751033

Gene position: 1420349-1420960 (Clockwise)

Preceding gene: 82751032

Following gene: 82751034

Centisome position: 51.79

GC content: 32.35

Gene sequence:

>612_bases
ATGATTGTTGGCTATGCGAGAGTCTCATCTATTGACCAAAATTTAGAAAGACAACTTGAAAATTTAAAAACATTTGGCGT
AGAGAAAATATTTACAGAGAAACAATCGGGCAAGTCAGTAGAAAATAGACCTGTATTTCAAGAAGCACTTAACTTTGTGA
GAATGGGAGATCGGTTTGTTGTGGAATCGATTGATCGTTTAGGACGTAATTATGATGAAGTTATTAATACAGTTCATTAT
TTAAAAGACAAAGAGGTTCAATTGATGATTACCAGTTTACCTACGATGAACGAAGTCATTAGCAATCCATTATTAGACAA
ATTTATGAAAGATTTAATTATACAGATATTAGCAATGGTTTCAGAACAAGAACGAAATGAAAGTAAACGTAGACAAGCAC
AAGGTATTAAAGTCGCGAAAGAAAAAGGTGTGTATAAAGGGCGCCCTTTATTATATTCGGCCGATGCGAAAGACCCTCAA
AAACGTATTATTTATAAAAGAGTTGTAGAAATGTTAGAAGGAGGGCAAACAATTAGTAAAATTGCCAAAGAAGTTAATAT
TACAAGACAAACAGTTTATAGAATTAAACATGATAAGGGATTATCTTGGTAA

Upstream 100 bases:

>100_bases
GTATTATTTAGGTACACCCTAATCATACAAGAAAAGTTGTTGAATTTATAGCAACTCAAACGTATGATTAGGGTGTATAT
TTATTAAGAGGTGAAAATCG

Downstream 100 bases:

>100_bases
ATGGATTGTCAATGCAAATGAGCGTTTCTCACAGCGTCCCAAAATATATGTTAATCATGTATTATGAGATTTTAATAATA
AGACAGGAAAAAGAGAGAGC

Product: recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MIVGYARVSSIDQNLERQLENLKTFGVEKIFTEKQSGKSVENRPVFQEALNFVRMGDRFVVESIDRLGRNYDEVINTVHY
LKDKEVQLMITSLPTMNEVISNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIKVAKEKGVYKGRPLLYSADAKDPQ
KRIIYKRVVEMLEGGQTISKIAKEVNITRQTVYRIKHDKGLSW

Sequences:

>Translated_203_residues
MIVGYARVSSIDQNLERQLENLKTFGVEKIFTEKQSGKSVENRPVFQEALNFVRMGDRFVVESIDRLGRNYDEVINTVHY
LKDKEVQLMITSLPTMNEVISNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIKVAKEKGVYKGRPLLYSADAKDPQ
KRIIYKRVVEMLEGGQTISKIAKEVNITRQTVYRIKHDKGLSW
>Mature_203_residues
MIVGYARVSSIDQNLERQLENLKTFGVEKIFTEKQSGKSVENRPVFQEALNFVRMGDRFVVESIDRLGRNYDEVINTVHY
LKDKEVQLMITSLPTMNEVISNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIKVAKEKGVYKGRPLLYSADAKDPQ
KRIIYKRVVEMLEGGQTISKIAKEVNITRQTVYRIKHDKGLSW

Specific function: Potential DNA invertase [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787638, Length=200, Percent_Identity=28.5, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1787827, Length=200, Percent_Identity=28.5, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1787404, Length=150, Percent_Identity=31.3333333333333, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 23507; Mature: 23507

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVGYARVSSIDQNLERQLENLKTFGVEKIFTEKQSGKSVENRPVFQEALNFVRMGDRFV
CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHH
VESIDRLGRNYDEVINTVHYLKDKEVQLMITSLPTMNEVISNPLLDKFMKDLIIQILAMV
HHHHHHHCCCHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
SEQERNESKRRQAQGIKVAKEKGVYKGRPLLYSADAKDPQKRIIYKRVVEMLEGGQTISK
HHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHH
IAKEVNITRQTVYRIKHDKGLSW
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIVGYARVSSIDQNLERQLENLKTFGVEKIFTEKQSGKSVENRPVFQEALNFVRMGDRFV
CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHH
VESIDRLGRNYDEVINTVHYLKDKEVQLMITSLPTMNEVISNPLLDKFMKDLIIQILAMV
HHHHHHHCCCHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
SEQERNESKRRQAQGIKVAKEKGVYKGRPLLYSADAKDPQKRIIYKRVVEMLEGGQTISK
HHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHH
IAKEVNITRQTVYRIKHDKGLSW
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2555186 [H]