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The map label for this gene is paiB [H]

Identifier: 82750992

GI number: 82750992

Start: 1372614

End: 1373231

Strand: Reverse

Name: paiB [H]

Synonym: SAB1256c

Alternate gene names: 82750992

Gene position: 1373231-1372614 (Counterclockwise)

Preceding gene: 82750993

Following gene: 82750982

Centisome position: 50.07

GC content: 31.39

Gene sequence:

>618_bases
ATGCATGTGCCAAAGTATTTTCAAGTAGATGATTTTAAAGAAATCGAAATGTTTATTCAAAGTAATTCTTTTGGAATGAT
TGTAACTGTGGATCAAGGAAAGCCTATAGCTACCCATGTACCATTAGTTTTAGATAAAAAAGGGGACGACTATTATATTA
GTGGGCATCTAGCTAAAACTAATCCTCAATGTAATACATTAAAAGATAATCAAAATGTATTAATCATATATCAAGGTGCA
CATTCTTACGTTTCTTCAGCGTGGTATGAAAAAGAAAATGTACCTACATGGAATTATCAAGCAGTTCATTTATATGGTGA
ATCAAGTATATTAAGTGAGGAAGAATTAATAGATGACTTGAAAAGACTATTGGTAAAGTATGAAAGGCATCGTGAAGACC
CAGTATTATGGGACAATATTTCTGAAAATACCAAAATGCAGGCCAAAGGTATTGTAGGCTTTAAAGTCAAGATACACAAG
ATAGAGGCTGCATACAAAATGAGTCAGAATCGTAATGAAAAGGATTATAATAATATAATTGAAAAGCTTGAAGATGAATC
TAATGCAAGCAGTGTTGCTGTAGCTGAAGTAATGAAAAATATTCATCCATATTCATAA

Upstream 100 bases:

>100_bases
TAAACGAGTGATACTATGGCATTACTCTAACTTATTTATCCTTAGATTTTTTAATGATAAAATATATTAAAATGAATTGT
TATTCACAGGGGGAGATCAT

Downstream 100 bases:

>100_bases
ACCAACAAGCAATAAACTCTTAATTAAATAATCTTAAAAATTCCCCGAGTCACAGTATAATTTTCTGTTCTTCGGGGATT
ACTTTATTTATTTTTATTTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MHVPKYFQVDDFKEIEMFIQSNSFGMIVTVDQGKPIATHVPLVLDKKGDDYYISGHLAKTNPQCNTLKDNQNVLIIYQGA
HSYVSSAWYEKENVPTWNYQAVHLYGESSILSEEELIDDLKRLLVKYERHREDPVLWDNISENTKMQAKGIVGFKVKIHK
IEAAYKMSQNRNEKDYNNIIEKLEDESNASSVAVAEVMKNIHPYS

Sequences:

>Translated_205_residues
MHVPKYFQVDDFKEIEMFIQSNSFGMIVTVDQGKPIATHVPLVLDKKGDDYYISGHLAKTNPQCNTLKDNQNVLIIYQGA
HSYVSSAWYEKENVPTWNYQAVHLYGESSILSEEELIDDLKRLLVKYERHREDPVLWDNISENTKMQAKGIVGFKVKIHK
IEAAYKMSQNRNEKDYNNIIEKLEDESNASSVAVAEVMKNIHPYS
>Mature_205_residues
MHVPKYFQVDDFKEIEMFIQSNSFGMIVTVDQGKPIATHVPLVLDKKGDDYYISGHLAKTNPQCNTLKDNQNVLIIYQGA
HSYVSSAWYEKENVPTWNYQAVHLYGESSILSEEELIDDLKRLLVKYERHREDPVLWDNISENTKMQAKGIVGFKVKIHK
IEAAYKMSQNRNEKDYNNIIEKLEDESNASSVAVAEVMKNIHPYS

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 23672; Mature: 23672

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVPKYFQVDDFKEIEMFIQSNSFGMIVTVDQGKPIATHVPLVLDKKGDDYYISGHLAKT
CCCCCCCCCCCHHHHHHEEECCCCEEEEEECCCCCEEEECCEEEECCCCCEEEEEEEEEC
NPQCNTLKDNQNVLIIYQGAHSYVSSAWYEKENVPTWNYQAVHLYGESSILSEEELIDDL
CCCCCCEECCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH
KRLLVKYERHREDPVLWDNISENTKMQAKGIVGFKVKIHKIEAAYKMSQNRNEKDYNNII
HHHHHHHHHCCCCCCEECCCCCCCEEEECCEEEEEEEEEEEHHHHHHHCCCCCCHHHHHH
EKLEDESNASSVAVAEVMKNIHPYS
HHHCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHVPKYFQVDDFKEIEMFIQSNSFGMIVTVDQGKPIATHVPLVLDKKGDDYYISGHLAKT
CCCCCCCCCCCHHHHHHEEECCCCEEEEEECCCCCEEEECCEEEECCCCCEEEEEEEEEC
NPQCNTLKDNQNVLIIYQGAHSYVSSAWYEKENVPTWNYQAVHLYGESSILSEEELIDDL
CCCCCCEECCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH
KRLLVKYERHREDPVLWDNISENTKMQAKGIVGFKVKIHKIEAAYKMSQNRNEKDYNNII
HHHHHHHHHCCCCCCEECCCCCCCEEEECCEEEEEEEEEEEHHHHHHHCCCCCCHHHHHH
EKLEDESNASSVAVAEVMKNIHPYS
HHHCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]